RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 NTHL1P78549 312 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 CREB5Q02930 508 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 SLC18A2Q05940 514 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 ST3GAL1Q11201 340 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 ILF3Q12906 894 aaKnown RBP eCLIP4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 PLD1Q13393 1074 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 TRIM14Q14142 442 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 UPP1Q16831 310 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 SH2D4BQ5SQS7 431 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 CYP4A22Q5TCH4 519 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 WBP2NLQ6ICG8 309 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 ZNF280DQ6N043 979 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 CDR2LQ86X02 465 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 MNS1Q8NEH6 495 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 VPS37AQ8NEZ2 397 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 ZNF461Q8TAF7 563 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 ITFG1Q8TB96 612 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 LNX1Q8TBB1 728 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 BICD1Q96G01 975 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 TIGD1Q96MW7 591 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 NCAPGQ9BPX3 1015 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 CLSTN3Q9BQT9 956 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 GAREM1Q9H706 876 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 PLEKHA5Q9HAU0 1116 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 MIOSQ9NXC5 875 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 WDR81Q562E7 1941 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 CEP192Q8TEP8 1941 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 FLNCQ14315 2725 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ITPR2Q14571 2701 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 MGAQ8IWI9 3026 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 SMIM28A0A1B0GU29 152 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 DYTNA2CJ06 578 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 TBCAO75347 108 aaKnown RBP4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ECI2O75521 394 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 IL1AP01583 271 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 SNRNP70P08621 437 aaKnown RBP4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CLTAP09496 248 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CCDC172P0C7W6 258 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CCDC192P0DO97 292 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 KCNE1P15382 129 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 PTPN2P17706 415 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CTPS1P17812 591 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CYP3A5P20815 502 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 MYF6P23409 242 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CCNE1P24864 410 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 HNF1BP35680 557 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 UBA7P41226 1012 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CCR10P46092 362 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 POU3F1Q03052 451 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 SMARCB1Q12824 385 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ZRSR1Q15695 479 aaKnown RBP4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 XKR4Q5GH76 650 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 FAM76BQ5HYJ3 339 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 NAPEPLDQ6IQ20 393 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 SLC8B1Q6J4K2 584 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ARMCX5Q6P1M9 558 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 DENND1BQ6P3S1 775 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 PRSS55Q6UWB4 352 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ALKAL1Q6UXT8 129 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ZSCAN30Q86W11 494 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CD302Q8IX05 232 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 RASSF8Q8NHQ8 419 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 DNASE1L2Q92874 299 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 EXOC4Q96A65 974 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ELSPBP1Q96BH3 223 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 RNFT2Q96EX2 444 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CALML4Q96GE6 196 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 MSANTD3Q96H12 275 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 TXNDC15Q96J42 360 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 B3GALT6Q96L58 329 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 KIFC3Q9BVG8 833 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 NPLQ9BXD5 320 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 GPR88Q9GZN0 384 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 PRORYQ9H606 182 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 CHODLQ9H9P2 273 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ZFP14Q9HCL3 533 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ASAH2Q9NR71 780 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 KIF17Q9P2E2 1029 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 ODF2LQ9ULJ1 636 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 DERAQ9Y315 318 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 KIF26AQ9ULI4 1882 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 RP1L1Q8IWN7 2480 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 SVILO95425 2214 aa4.23□□□□□ -1.73
GTF3C3-207ENST00000451088 IGLV5-37A0A075B6J1 123 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 VWA3AA6NCI4 1184 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 ENO4A6NNW6 628 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 CCL16O15467 120 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 EXTL3O43909 919 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 ZNF500O60304 480 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 RHOBTB1O94844 696 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 ADAP00813 363 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 PLA2G4BP0C869 781 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 ODC1P11926 461 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 LONP1P36776 959 aaKnown RBP4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 LIG4P49917 911 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 POU5F1Q01860 360 aaKnown RBP4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 ROR1Q01973 937 aa4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 YWHAHQ04917 246 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-207ENST00000451088 BECN1Q14457 450 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms