RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NAPBQ9H115 298 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 SUDS3Q9H7L9 328 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 MAP3K20Q9NYL2 800 aaKnown RBP4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 DLGAP4Q9Y2H0 992 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 AAR2Q9Y312 384 aaKnown RBP4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 ABCB11O95342 1321 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 CEP250Q9BV73 2442 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 NCOR2Q9Y618 2525 aa4.6□□□□□ -1.67
HMGB3P5-201ENST00000428894 LRRC53A6NM62 1247 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 VCYO14598 125 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 RNF113AO15541 343 aaKnown RBP4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 SPINT2O43291 252 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 GPAA1O43292 621 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 RANBP6O60518 1105 aaKnown RBP4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 ZNF286BP0CG31 522 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 SMIM10L2AP0DMW4 78 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 SMIM10L2BP0DMW5 78 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 TOP1P11387 765 aaKnown RBP4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 HOXC8P31273 242 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 CDAP32320 146 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 MTHFRP42898 656 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 PAFAH1B1P43034 410 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 NOVP48745 357 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 VEGFCP49767 419 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 ERVK11-1P61568 191 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 FGFBP1Q14512 234 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 BAK1Q16611 211 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 USP41Q3LFD5 358 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 HSDL1Q3SXM5 330 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 TMEM35AQ53FP2 167 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 SIRPB2Q5JXA9 342 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 FAM171BQ6P995 826 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 BRAT1Q6PJG6 821 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 ADGRD2Q7Z7M1 963 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 ITPRIPQ8IWB1 547 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 FANCMQ8IYD8 2048 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 BEST3Q8N1M1 668 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 CADM4Q8NFZ8 388 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 NRCAMQ92823 1304 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 CASP10Q92851 521 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 FAM210AQ96ND0 272 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 TAAR1Q96RJ0 339 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 C16orf70Q9BSU1 422 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 S1PR5Q9H228 398 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 SLC6A13Q9NSD5 602 aa4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 ZNF215Q9UL58 517 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 MRPL11Q9Y3B7 192 aaKnown RBP4.59□□□□□ -1.67
HMGB3P5-201ENST00000428894 PLXNA4Q9HCM2 1894 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 CHD6Q8TD26 2715 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 CCDC171Q6TFL3 1326 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 A0A1W2PQM1 296 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 PMS2P5A8MQ11 134 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 M0QZ92 97 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZNHIT1O43257 154 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 SH3BP5O60239 455 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 GGPS1O95749 300 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 CHRNA1P02708 482 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 GHRP10912 638 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 PDHBP11177 359 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 PAX1P15863 534 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 DNAJB1P25685 340 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 ABCD1P33897 745 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 CPOXP36551 454 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 CCT5P48643 541 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 TAS2R38P59533 333 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 KCNC3Q14003 757 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 DRAP1Q14919 205 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 NONOQ15233 471 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 GSTA3Q16772 222 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 USH1GQ495M9 461 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 C14orf177Q52M58 125 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 C6orf141Q5SZD1 244 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 FAM69AQ5T7M9 428 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 FRG2Q64ET8 278 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 GET4Q7L5D6 327 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 TDRD5Q8NAT2 981 aaKnown RBP4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 OR5R1Q8NH85 324 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 CTCFLQ8NI51 663 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 FAM76AQ8TAV0 307 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 MYCBPQ99417 103 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 TMEM47Q9BQJ4 181 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 NEURL2Q9BR09 285 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 UBA5Q9GZZ9 404 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 SEBOXQ9HB31 216 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 PXMP2Q9NR77 195 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 TCP11L1Q9NUJ3 509 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 SETD4Q9NVD3 440 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 HCFC1R1Q9NWW0 138 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 RRN3Q9NYV6 651 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 SARDHQ9UL12 918 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 ATRXP46100 2492 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 LOXHD1Q8IVV2 1947 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 KIAA1671Q9BY89 1806 aa4.58□□□□□ -1.68
HMGB3P5-201ENST00000428894 MAP1BP46821 2468 aaKnown RBP4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 SPTBN2O15020 2390 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 OTOGLQ3ZCN5 2332 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 C2CD4DB7Z1M9 353 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 PI15O43692 258 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 KINO60870 393 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms