RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 GFYI3L273 518 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 QSOX1O00391 747 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 PDGFBP01127 241 aaPredicted RBP22.03■■□□□ 1.12
CDX1-201ENST00000231656 XRCC1P18887 633 aaPredicted RBP22.03■■□□□ 1.12
CDX1-201ENST00000231656 IGFALSP35858 605 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 VHLP40337 213 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 ARL1P40616 181 aaPredicted RBP22.03■■□□□ 1.12
CDX1-201ENST00000231656 PXNP49023 591 aaPredicted RBP22.03■■□□□ 1.12
CDX1-201ENST00000231656 ERVK-8P63133 956 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 GRIK2Q13002 908 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 C6orf136Q5SQH8 315 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 TTC23LQ6PF05 361 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 BRINP2Q9C0B6 783 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 WDR26Q9H7D7 661 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 ARL15Q9NXU5 204 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 LRRC42Q9Y546 428 aa22.03■■□□□ 1.12
CDX1-201ENST00000231656 NR5A2O00482 541 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 STK16O75716 305 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 ME2P23368 584 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 CD6P30203 668 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 PRLHRP49683 370 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 CWF19L1Q69YN2 538 aaKnown RBP22.02■■□□□ 1.12
CDX1-201ENST00000231656 IL27RAQ6UWB1 636 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 RNF165Q6ZSG1 346 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 RETREG3Q86VR2 466 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 TCAIMQ8N3R3 496 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 SFRP1Q8N474 314 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 CAMKK1Q8N5S9 505 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 FRMD1Q8N878 549 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 RLN3Q8WXF3 142 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 EDAQ92838 391 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 NTMT1Q9BV86 223 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 EPHX3Q9H6B9 360 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 C6orf106Q9H6K1 298 aaPredicted RBP22.02■■□□□ 1.12
CDX1-201ENST00000231656 SLC52A3Q9NQ40 469 aa22.02■■□□□ 1.12
CDX1-201ENST00000231656 LATO43561 262 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 VEGFDO43915 354 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 SLCO2B1O94956 709 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 CAPN3P20807 821 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 HMOX2P30519 316 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 CXCL12P48061 93 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 PIK3CGP48736 1102 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 RPS6KA2Q15349 733 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 ZXDCQ2QGD7 858 aaPredicted RBP22.02■■□□□ 1.11
CDX1-201ENST00000231656 TMEM220Q6QAJ8 160 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 BLOC1S3Q6QNY0 202 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 FAM160A2Q8N612 972 aaPredicted RBP22.02■■□□□ 1.11
CDX1-201ENST00000231656 SLC26A7Q8TE54 656 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 ASZ1Q8WWH4 475 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 PYDC1Q8WXC3 89 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 MYOCQ99972 504 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 IER2Q9BTL4 223 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 TRIM54Q9BYV2 358 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 DLGAP2Q9P1A6 1054 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 TRPS1Q9UHF7 1281 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 TMEM98Q9Y2Y6 226 aa22.02■■□□□ 1.11
CDX1-201ENST00000231656 CACNA1IQ9P0X4 2223 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 ZFC3H1O60293 1989 aaKnown RBP22.01■■□□□ 1.11
CDX1-201ENST00000231656 IGHV1OR15-9A0A0B4J2B8 117 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 E7ENX8 843 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 EPB42P16452 691 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 EPORP19235 508 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 ZFP36L2P47974 494 aaKnown RBP22.01■■□□□ 1.11
CDX1-201ENST00000231656 ABRAXAS2Q15018 415 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 ATP6AP1LQ52LC2 224 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 PDCD4Q53EL6 469 aaKnown RBP22.01■■□□□ 1.11
CDX1-201ENST00000231656 DENND6BQ8NEG7 585 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 SKA2Q8WVK7 121 aaPredicted RBP22.01■■□□□ 1.11
CDX1-201ENST00000231656 ROPN1LQ96C74 230 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 SLC32A1Q9H598 525 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 NDUFAF1Q9Y375 327 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 CCL27Q9Y4X3 112 aa22.01■■□□□ 1.11
CDX1-201ENST00000231656 TMEM202A6NGA9 273 aa22■■□□□ 1.11
CDX1-201ENST00000231656 TRIM38O00635 465 aa22■■□□□ 1.11
CDX1-201ENST00000231656 PI15O43692 258 aa22■■□□□ 1.11
CDX1-201ENST00000231656 IGHV4-34P06331 123 aa22■■□□□ 1.11
CDX1-201ENST00000231656 EBLN1P0CF75 366 aa22■■□□□ 1.11
CDX1-201ENST00000231656 ZNF8P17098 575 aaPredicted RBP22■■□□□ 1.11
CDX1-201ENST00000231656 SLC6A12P48065 614 aa22■■□□□ 1.11
CDX1-201ENST00000231656 MS4A2Q01362 244 aa22■■□□□ 1.11
CDX1-201ENST00000231656 BCL7AQ4VC05 210 aa22■■□□□ 1.11
CDX1-201ENST00000231656 TJAP1Q5JTD0 557 aa22■■□□□ 1.11
CDX1-201ENST00000231656 LRRC70Q7Z2Q7 622 aa22■■□□□ 1.11
CDX1-201ENST00000231656 RNF148Q8N7C7 305 aa22■■□□□ 1.11
CDX1-201ENST00000231656 HIPK4Q8NE63 616 aa22■■□□□ 1.11
CDX1-201ENST00000231656 TSPEARQ8WU66 669 aa22■■□□□ 1.11
CDX1-201ENST00000231656 SLC45A3Q96JT2 553 aa22■■□□□ 1.11
CDX1-201ENST00000231656 C1orf50Q9BV19 199 aa22■■□□□ 1.11
CDX1-201ENST00000231656 GPR174Q9BXC1 333 aa22■■□□□ 1.11
CDX1-201ENST00000231656 PHPT1Q9NRX4 125 aaPredicted RBP22■■□□□ 1.11
CDX1-201ENST00000231656 NMRK1Q9NWW6 199 aa22■■□□□ 1.11
CDX1-201ENST00000231656 ADA2Q9NZK5 511 aa22■■□□□ 1.11
CDX1-201ENST00000231656 MAP10Q9P2G4 905 aa22■■□□□ 1.11
CDX1-201ENST00000231656 CROTQ9UKG9 612 aa22■■□□□ 1.11
CDX1-201ENST00000231656 LSM1O15116 133 aaKnown RBP21.99■■□□□ 1.11
CDX1-201ENST00000231656 LILRB5O75023 590 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 WDR47O94967 919 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 CYP2A7P20853 494 aa21.99■■□□□ 1.11
CDX1-201ENST00000231656 HNRNPA2B1P22626 353 aaKnown RBP21.99■■□□□ 1.11
CDX1-201ENST00000231656 HNMTP50135 292 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms