RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W YPL066WQ12194 479 aa1.58□□□□□ -2.16
SEC8YPR055W CDC34P14682 295 aa1.57□□□□□ -2.16
SEC8YPR055W BAS1P22035 811 aa1.57□□□□□ -2.16
SEC8YPR055W DBP2P24783 546 aaKnown RBP1.57□□□□□ -2.16
SEC8YPR055W RNQ1P25367 405 aa1.57□□□□□ -2.16
SEC8YPR055W ADP1P25371 1049 aa1.57□□□□□ -2.16
SEC8YPR055W RTT10Q08924 1013 aa1.57□□□□□ -2.16
SEC8YPR055W INO1P11986 533 aa1.57□□□□□ -2.16
SEC8YPR055W LPX1Q12405 387 aaKnown RBP1.57□□□□□ -2.16
SEC8YPR055W NSI1Q12457 570 aa1.57□□□□□ -2.16
SEC8YPR055W RAD27P26793 382 aa1.57□□□□□ -2.16
SEC8YPR055W YGL176CP46945 554 aa1.57□□□□□ -2.16
SEC8YPR055W TYW3P53177 273 aa1.57□□□□□ -2.16
SEC8YPR055W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SEC8YPR055W VPS16Q03308 798 aa1.57□□□□□ -2.16
SEC8YPR055W HRK1Q08732 759 aaKnown RBP1.57□□□□□ -2.16
SEC8YPR055W FAL1Q12099 399 aaKnown RBP1.57□□□□□ -2.16
SEC8YPR055W CNN1P43618 361 aa1.56□□□□□ -2.16
SEC8YPR055W VPS53P47061 822 aa1.56□□□□□ -2.16
SEC8YPR055W YDL177CQ12257 170 aa1.56□□□□□ -2.16
SEC8YPR055W DFG16Q99234 619 aa1.56□□□□□ -2.16
SEC8YPR055W DBP5P20449 482 aaKnown RBP1.56□□□□□ -2.16
SEC8YPR055W GAS1P22146 559 aaKnown RBP1.56□□□□□ -2.16
SEC8YPR055W MBP1P39678 833 aa1.56□□□□□ -2.16
SEC8YPR055W MPH1P40562 993 aa1.56□□□□□ -2.16
SEC8YPR055W RKM2Q03942 479 aa1.56□□□□□ -2.16
SEC8YPR055W YOR059CQ08448 450 aaKnown RBP1.56□□□□□ -2.16
SEC8YPR055W LYP1P32487 611 aa1.55□□□□□ -2.16
SEC8YPR055W ABZ1P37254 787 aaPredicted RBP1.55□□□□□ -2.16
SEC8YPR055W PAM1P37304 830 aaKnown RBP1.55□□□□□ -2.16
SEC8YPR055W SNU71P53207 620 aaKnown RBP1.55□□□□□ -2.16
SEC8YPR055W HOS3Q02959 697 aaKnown RBP1.55□□□□□ -2.16
SEC8YPR055W RSB1Q08417 382 aa1.55□□□□□ -2.16
SEC8YPR055W ROT1Q03691 256 aa1.55□□□□□ -2.16
SEC8YPR055W RSC58Q07979 502 aa1.55□□□□□ -2.16
SEC8YPR055W SPS1P08458 490 aa1.55□□□□□ -2.16
SEC8YPR055W RPL11AP0C0W9 174 aaKnown RBP1.55□□□□□ -2.16
SEC8YPR055W SNF5P18480 905 aa1.55□□□□□ -2.16
SEC8YPR055W SIP5P40210 489 aaKnown RBP1.55□□□□□ -2.16
SEC8YPR055W SPP382Q06411 708 aaPredicted RBP1.55□□□□□ -2.16
SEC8YPR055W RPL11BQ3E757 174 aaPredicted RBP1.55□□□□□ -2.16
SEC8YPR055W COQ4O13525 335 aa1.54□□□□□ -2.16
SEC8YPR055W CYC1P00044 109 aaPredicted RBP1.54□□□□□ -2.16
SEC8YPR055W BI4P03879 638 aa1.54□□□□□ -2.16
SEC8YPR055W MDL2P33311 773 aa1.54□□□□□ -2.16
SEC8YPR055W YKL107WP34251 309 aa1.54□□□□□ -2.16
SEC8YPR055W UGA2P38067 497 aa1.54□□□□□ -2.16
SEC8YPR055W ERT1P38140 529 aa1.54□□□□□ -2.16
SEC8YPR055W RGD1P38339 666 aa1.54□□□□□ -2.16
SEC8YPR055W MET10P39692 1035 aa1.54□□□□□ -2.16
SEC8YPR055W GCV2P49095 1034 aa1.54□□□□□ -2.16
SEC8YPR055W TNA1P53322 534 aa1.54□□□□□ -2.16
SEC8YPR055W PIN2Q12057 282 aa1.54□□□□□ -2.16
SEC8YPR055W CMP2P14747 604 aa1.54□□□□□ -2.16
SEC8YPR055W AIM3P38266 947 aaKnown RBP1.54□□□□□ -2.16
SEC8YPR055W YGR053CP53234 283 aa1.54□□□□□ -2.16
SEC8YPR055W GTF1P53260 183 aaPredicted RBP1.54□□□□□ -2.16
SEC8YPR055W RMD1Q03441 430 aa1.54□□□□□ -2.16
SEC8YPR055W SPO20Q04359 397 aa1.54□□□□□ -2.16
SEC8YPR055W XYL2Q07993 356 aa1.54□□□□□ -2.16
SEC8YPR055W OPI10Q08202 246 aa1.54□□□□□ -2.16
SEC8YPR055W YPL260WQ08977 551 aa1.54□□□□□ -2.16
SEC8YPR055W TMA46Q12000 345 aaKnown RBP1.54□□□□□ -2.16
SEC8YPR055W STE5P32917 917 aa1.53□□□□□ -2.16
SEC8YPR055W CCZ1P38273 704 aa1.53□□□□□ -2.16
SEC8YPR055W MRPL22P53881 309 aa1.53□□□□□ -2.16
SEC8YPR055W NBA1Q08229 501 aaKnown RBP1.53□□□□□ -2.16
SEC8YPR055W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
SEC8YPR055W SVS1Q12254 260 aa1.53□□□□□ -2.16
SEC8YPR055W TAF13P11747 167 aa1.53□□□□□ -2.16
SEC8YPR055W CLN2P20438 545 aa1.53□□□□□ -2.16
SEC8YPR055W APL1P27351 700 aa1.53□□□□□ -2.16
SEC8YPR055W MNR2P35724 969 aa1.53□□□□□ -2.16
SEC8YPR055W VBA5P36172 582 aa1.53□□□□□ -2.16
SEC8YPR055W HNT2P49775 206 aa1.53□□□□□ -2.16
SEC8YPR055W RIB2Q12362 591 aaKnown RBP1.53□□□□□ -2.16
SEC8YPR055W SRM1P21827 482 aa1.53□□□□□ -2.17
SEC8YPR055W FOL2P51601 243 aaKnown RBP1.53□□□□□ -2.17
SEC8YPR055W PLB2Q03674 706 aa1.53□□□□□ -2.17
SEC8YPR055W HRQ1Q05549 1077 aa1.53□□□□□ -2.17
SEC8YPR055W TDA5Q06417 326 aaKnown RBP1.53□□□□□ -2.17
SEC8YPR055W GNT1Q12096 491 aa1.53□□□□□ -2.17
SEC8YPR055W GAL10P04397 699 aa1.52□□□□□ -2.17
SEC8YPR055W SRO9P25567 434 aaKnown RBP1.52□□□□□ -2.17
SEC8YPR055W YKL151CP36059 337 aa1.52□□□□□ -2.17
SEC8YPR055W BAP2P38084 609 aa1.52□□□□□ -2.17
SEC8YPR055W PNT1P38969 423 aa1.52□□□□□ -2.17
SEC8YPR055W SVF1Q05515 481 aa1.52□□□□□ -2.17
SEC8YPR055W CDA2Q06703 312 aa1.52□□□□□ -2.17
SEC8YPR055W GRX1P25373 110 aaKnown RBP1.52□□□□□ -2.17
SEC8YPR055W SLA2P33338 968 aa1.52□□□□□ -2.17
SEC8YPR055W RFC5P38251 354 aa1.52□□□□□ -2.17
SEC8YPR055W YBR184WP38299 523 aa1.52□□□□□ -2.17
SEC8YPR055W PIK1P39104 1066 aa1.52□□□□□ -2.17
SEC8YPR055W SAH1P39954 449 aaKnown RBP1.52□□□□□ -2.17
SEC8YPR055W NPP2P39997 493 aa1.52□□□□□ -2.17
SEC8YPR055W HFM1P51979 1187 aa1.52□□□□□ -2.17
SEC8YPR055W SFB2P53953 876 aa1.52□□□□□ -2.17
SEC8YPR055W YDR306CQ06640 478 aa1.52□□□□□ -2.17
SEC8YPR055W UBX5Q06682 500 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms