RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C ROD1Q02805 837 aa3.98□□□□□ -1.77
VTI1YMR197C YPL260WQ08977 551 aa3.98□□□□□ -1.77
VTI1YMR197C PRE9P23638 258 aaKnown RBP3.97□□□□□ -1.77
VTI1YMR197C PUF4P25339 888 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
VTI1YMR197C CTS1P29029 562 aa3.97□□□□□ -1.77
VTI1YMR197C ABZ1P37254 787 aaPredicted RBP3.97□□□□□ -1.77
VTI1YMR197C SHM2P37291 469 aaKnown RBP3.97□□□□□ -1.77
VTI1YMR197C MEF2P39677 819 aa3.97□□□□□ -1.77
VTI1YMR197C RPN3P40016 523 aaKnown RBP3.97□□□□□ -1.77
VTI1YMR197C MRPS18P42847 217 aa3.97□□□□□ -1.77
VTI1YMR197C HNT2P49775 206 aa3.97□□□□□ -1.77
VTI1YMR197C GCN5Q03330 439 aa3.97□□□□□ -1.77
VTI1YMR197C MCD1Q12158 566 aa3.97□□□□□ -1.77
VTI1YMR197C MKK2P32491 506 aa3.96□□□□□ -1.78
VTI1YMR197C YFL054CP43549 646 aa3.96□□□□□ -1.78
VTI1YMR197C SIW14P53965 281 aa3.96□□□□□ -1.78
VTI1YMR197C ROT1Q03691 256 aa3.96□□□□□ -1.78
VTI1YMR197C RAD2P07276 1031 aa3.95□□□□□ -1.78
VTI1YMR197C TAT2P38967 592 aa3.95□□□□□ -1.78
VTI1YMR197C SEN54Q02825 467 aaPredicted RBP3.95□□□□□ -1.78
VTI1YMR197C GSF2Q04697 403 aaKnown RBP3.95□□□□□ -1.78
VTI1YMR197C RFC5P38251 354 aa3.94□□□□□ -1.78
VTI1YMR197C MPT5P39016 859 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
VTI1YMR197C RPS26AP39938 119 aaKnown RBP3.94□□□□□ -1.78
VTI1YMR197C RPS26BP39939 119 aaKnown RBP3.94□□□□□ -1.78
VTI1YMR197C PLB2Q03674 706 aa3.94□□□□□ -1.78
VTI1YMR197C MRL1Q06815 381 aa3.94□□□□□ -1.78
VTI1YMR197C TUB2P02557 457 aaKnown RBP3.93□□□□□ -1.78
VTI1YMR197C GAL10P04397 699 aa3.93□□□□□ -1.78
VTI1YMR197C CMP2P14747 604 aa3.93□□□□□ -1.78
VTI1YMR197C CYC8P14922 966 aa3.93□□□□□ -1.78
VTI1YMR197C SYP1P25623 870 aaKnown RBP3.93□□□□□ -1.78
VTI1YMR197C SEC8P32855 1065 aa3.93□□□□□ -1.78
VTI1YMR197C RGD1P38339 666 aa3.93□□□□□ -1.78
VTI1YMR197C HXT13P39924 564 aa3.93□□□□□ -1.78
VTI1YMR197C ENT3P47160 408 aa3.93□□□□□ -1.78
VTI1YMR197C GNP1P48813 663 aa3.93□□□□□ -1.78
VTI1YMR197C HXT17P53631 564 aa3.93□□□□□ -1.78
VTI1YMR197C HXT15P54854 567 aa3.93□□□□□ -1.78
VTI1YMR197C RSM24Q03976 319 aa3.93□□□□□ -1.78
VTI1YMR197C DUS4Q06063 367 aa3.93□□□□□ -1.78
VTI1YMR197C YER152CP10356 443 aa3.92□□□□□ -1.78
VTI1YMR197C SRM1P21827 482 aa3.92□□□□□ -1.78
VTI1YMR197C MLS1P30952 554 aa3.92□□□□□ -1.78
VTI1YMR197C RIB2Q12362 591 aaKnown RBP3.92□□□□□ -1.78
VTI1YMR197C MCM2P29469 868 aa3.91□□□□□ -1.78
VTI1YMR197C CNN1P43618 361 aa3.91□□□□□ -1.78
VTI1YMR197C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
VTI1YMR197C SVS1Q12254 260 aa3.91□□□□□ -1.78
VTI1YMR197C GCR1P07261 785 aa3.9□□□□□ -1.79
VTI1YMR197C DBP5P20449 482 aaKnown RBP3.9□□□□□ -1.79
VTI1YMR197C DOM34P33309 386 aa3.9□□□□□ -1.79
VTI1YMR197C SLD2P34252 453 aa3.9□□□□□ -1.79
VTI1YMR197C MGE1P38523 228 aa3.9□□□□□ -1.79
VTI1YMR197C RXT3Q07458 294 aa3.9□□□□□ -1.79
VTI1YMR197C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
VTI1YMR197C KIN2P13186 1147 aaKnown RBP3.89□□□□□ -1.79
VTI1YMR197C BAS1P22035 811 aa3.89□□□□□ -1.79
VTI1YMR197C APL1P27351 700 aa3.89□□□□□ -1.79
VTI1YMR197C POL32P47110 350 aa3.89□□□□□ -1.79
VTI1YMR197C SPR28Q04921 423 aa3.89□□□□□ -1.79
VTI1YMR197C TMA10Q06177 86 aa3.89□□□□□ -1.79
VTI1YMR197C ACK1Q07622 623 aaPredicted RBP3.89□□□□□ -1.79
VTI1YMR197C GPB1Q08886 897 aa3.89□□□□□ -1.79
VTI1YMR197C CDC20P26309 610 aa3.88□□□□□ -1.79
VTI1YMR197C MPH1P40562 993 aa3.88□□□□□ -1.79
VTI1YMR197C GTF1P53260 183 aaPredicted RBP3.88□□□□□ -1.79
VTI1YMR197C SIZ1Q04195 904 aa3.88□□□□□ -1.79
VTI1YMR197C PNS1Q12412 539 aa3.88□□□□□ -1.79
VTI1YMR197C CDC6P09119 513 aa3.87□□□□□ -1.79
VTI1YMR197C ATE1P16639 503 aa3.87□□□□□ -1.79
VTI1YMR197C LST4P34239 828 aa3.87□□□□□ -1.79
VTI1YMR197C MCM7P38132 845 aa3.87□□□□□ -1.79
VTI1YMR197C FYV10P40492 516 aa3.87□□□□□ -1.79
VTI1YMR197C PBP1P53297 722 aaKnown RBP3.87□□□□□ -1.79
VTI1YMR197C YAP6Q03935 383 aa3.87□□□□□ -1.79
VTI1YMR197C STE11P23561 717 aa3.86□□□□□ -1.79
VTI1YMR197C TRM2P33753 639 aa3.86□□□□□ -1.79
VTI1YMR197C MXR1P40029 184 aa3.86□□□□□ -1.79
VTI1YMR197C MCM6P53091 1017 aaKnown RBP3.86□□□□□ -1.79
VTI1YMR197C TIF35Q04067 274 aaKnown RBP3.86□□□□□ -1.79
VTI1YMR197C ATG13Q06628 738 aa3.86□□□□□ -1.79
VTI1YMR197C BI4P03879 638 aa3.85□□□□□ -1.79
VTI1YMR197C HCM1P25364 564 aa3.85□□□□□ -1.79
VTI1YMR197C RAD27P26793 382 aa3.85□□□□□ -1.79
VTI1YMR197C RER2P35196 286 aa3.85□□□□□ -1.79
VTI1YMR197C UGA2P38067 497 aa3.85□□□□□ -1.79
VTI1YMR197C YJR107WP47145 328 aa3.85□□□□□ -1.79
VTI1YMR197C GCV2P49095 1034 aa3.85□□□□□ -1.79
VTI1YMR197C MNN10P50108 393 aaKnown RBP3.85□□□□□ -1.79
VTI1YMR197C VPS62P53285 467 aa3.85□□□□□ -1.79
VTI1YMR197C MSC2Q03455 724 aa3.85□□□□□ -1.79
VTI1YMR197C ESF1Q06344 628 aaKnown RBP3.85□□□□□ -1.79
VTI1YMR197C PUS9Q12069 462 aa3.85□□□□□ -1.79
VTI1YMR197C GNT1Q12096 491 aa3.85□□□□□ -1.79
VTI1YMR197C RPL11AP0C0W9 174 aaKnown RBP3.84□□□□□ -1.79
VTI1YMR197C ACE2P21192 770 aa3.84□□□□□ -1.79
VTI1YMR197C EMC1P25574 760 aa3.84□□□□□ -1.79
VTI1YMR197C MSE1P48525 536 aa3.84□□□□□ -1.79
VTI1YMR197C RTT10Q08924 1013 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms