RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YER152CP10356 443 aa5.58□□□□□ -1.52
ATG38YLR211C MLS1P30952 554 aa5.58□□□□□ -1.52
ATG38YLR211C ASF1P32447 279 aa5.58□□□□□ -1.52
ATG38YLR211C THI80P35202 319 aa5.58□□□□□ -1.52
ATG38YLR211C ABZ1P37254 787 aaPredicted RBP5.58□□□□□ -1.52
ATG38YLR211C UBP5P39944 805 aa5.58□□□□□ -1.52
ATG38YLR211C TNA1P53322 534 aa5.58□□□□□ -1.52
ATG38YLR211C YPL260WQ08977 551 aa5.58□□□□□ -1.52
ATG38YLR211C DBP5P20449 482 aaKnown RBP5.57□□□□□ -1.52
ATG38YLR211C MPH1P40562 993 aa5.57□□□□□ -1.52
ATG38YLR211C CNN1P43618 361 aa5.57□□□□□ -1.52
ATG38YLR211C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
ATG38YLR211C RMD1Q03441 430 aa5.57□□□□□ -1.52
ATG38YLR211C RTT10Q08924 1013 aa5.57□□□□□ -1.52
ATG38YLR211C RGD1P38339 666 aa5.56□□□□□ -1.52
ATG38YLR211C RPN3P40016 523 aaKnown RBP5.56□□□□□ -1.52
ATG38YLR211C MRPL22P53881 309 aa5.56□□□□□ -1.52
ATG38YLR211C EEB1Q02891 456 aa5.56□□□□□ -1.52
ATG38YLR211C TIF35Q04067 274 aaKnown RBP5.56□□□□□ -1.52
ATG38YLR211C COQ4O13525 335 aa5.55□□□□□ -1.52
ATG38YLR211C PIK1P39104 1066 aa5.55□□□□□ -1.52
ATG38YLR211C PRP43P53131 767 aaKnown RBP5.55□□□□□ -1.52
ATG38YLR211C AIM3P38266 947 aaKnown RBP5.54□□□□□ -1.52
ATG38YLR211C SPS1P08458 490 aa5.53□□□□□ -1.52
ATG38YLR211C CDC34P14682 295 aa5.53□□□□□ -1.52
ATG38YLR211C CCZ1P38273 704 aa5.53□□□□□ -1.52
ATG38YLR211C PRP6P19735 899 aaPredicted RBP5.52□□□□□ -1.53
ATG38YLR211C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
ATG38YLR211C NBA1Q08229 501 aaKnown RBP5.52□□□□□ -1.53
ATG38YLR211C TRP2P00899 507 aaKnown RBP5.51□□□□□ -1.53
ATG38YLR211C DBP2P24783 546 aaKnown RBP5.51□□□□□ -1.53
ATG38YLR211C PUF4P25339 888 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
ATG38YLR211C RAD27P26793 382 aa5.51□□□□□ -1.53
ATG38YLR211C PET112P33893 541 aa5.51□□□□□ -1.53
ATG38YLR211C MXR1P40029 184 aa5.51□□□□□ -1.53
ATG38YLR211C TAF1P46677 1066 aa5.51□□□□□ -1.53
ATG38YLR211C FOL2P51601 243 aaKnown RBP5.51□□□□□ -1.53
ATG38YLR211C YPL066WQ12194 479 aa5.51□□□□□ -1.53
ATG38YLR211C MET10P39692 1035 aa5.5□□□□□ -1.53
ATG38YLR211C SEC26P41810 973 aaKnown RBP5.5□□□□□ -1.53
ATG38YLR211C YPL277CQ08989 487 aa5.5□□□□□ -1.53
ATG38YLR211C TMA46Q12000 345 aaKnown RBP5.5□□□□□ -1.53
ATG38YLR211C RIB2Q12362 591 aaKnown RBP5.5□□□□□ -1.53
ATG38YLR211C SRM1P21827 482 aa5.49□□□□□ -1.53
ATG38YLR211C LYP1P32487 611 aa5.49□□□□□ -1.53
ATG38YLR211C MOT2P34909 587 aaKnown RBP5.49□□□□□ -1.53
ATG38YLR211C MCM7P38132 845 aa5.49□□□□□ -1.53
ATG38YLR211C HNT2P49775 206 aa5.49□□□□□ -1.53
ATG38YLR211C SNO2P53823 222 aa5.49□□□□□ -1.53
ATG38YLR211C RSB1Q08417 382 aa5.49□□□□□ -1.53
ATG38YLR211C CYC1P00044 109 aaPredicted RBP5.48□□□□□ -1.53
ATG38YLR211C RPL11AP0C0W9 174 aaKnown RBP5.48□□□□□ -1.53
ATG38YLR211C RIM8P53179 542 aa5.48□□□□□ -1.53
ATG38YLR211C PLB2Q03674 706 aa5.48□□□□□ -1.53
ATG38YLR211C YDR132CQ03900 495 aa5.48□□□□□ -1.53
ATG38YLR211C ESC8Q08119 714 aa5.48□□□□□ -1.53
ATG38YLR211C GNT1Q12096 491 aa5.48□□□□□ -1.53
ATG38YLR211C RPL11BQ3E757 174 aaPredicted RBP5.48□□□□□ -1.53
ATG38YLR211C SOD2P00447 233 aa5.47□□□□□ -1.53
ATG38YLR211C BAS1P22035 811 aa5.47□□□□□ -1.53
ATG38YLR211C MNR2P35724 969 aa5.47□□□□□ -1.53
ATG38YLR211C PNT1P38969 423 aa5.47□□□□□ -1.53
ATG38YLR211C ESC2Q06340 456 aa5.47□□□□□ -1.53
ATG38YLR211C RPS13P05756 151 aaKnown RBP5.46□□□□□ -1.54
ATG38YLR211C INO1P11986 533 aa5.46□□□□□ -1.54
ATG38YLR211C SLA2P33338 968 aa5.46□□□□□ -1.54
ATG38YLR211C FLR1P38124 548 aa5.46□□□□□ -1.54
ATG38YLR211C FAA4P47912 694 aaKnown RBP5.46□□□□□ -1.54
ATG38YLR211C TYW3P53177 273 aa5.46□□□□□ -1.54
ATG38YLR211C YGR053CP53234 283 aa5.46□□□□□ -1.54
ATG38YLR211C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
ATG38YLR211C YCR015CP25616 317 aa5.45□□□□□ -1.54
ATG38YLR211C TOD6P34219 525 aa5.45□□□□□ -1.54
ATG38YLR211C LAM1P38851 1228 aa5.45□□□□□ -1.54
ATG38YLR211C SIP5P40210 489 aaKnown RBP5.45□□□□□ -1.54
ATG38YLR211C YLR225CQ05948 407 aaKnown RBP5.45□□□□□ -1.54
ATG38YLR211C SGD1Q06132 899 aa5.45□□□□□ -1.54
ATG38YLR211C SVS1Q12254 260 aa5.45□□□□□ -1.54
ATG38YLR211C GAL10P04397 699 aa5.44□□□□□ -1.54
ATG38YLR211C UGA2P38067 497 aa5.44□□□□□ -1.54
ATG38YLR211C RFC5P38251 354 aa5.44□□□□□ -1.54
ATG38YLR211C MEF2P39677 819 aa5.44□□□□□ -1.54
ATG38YLR211C ENV11P53246 860 aa5.44□□□□□ -1.54
ATG38YLR211C ROT1Q03691 256 aa5.44□□□□□ -1.54
ATG38YLR211C DUS4Q06063 367 aa5.44□□□□□ -1.54
ATG38YLR211C ATG13Q06628 738 aa5.44□□□□□ -1.54
ATG38YLR211C BI4P03879 638 aa5.43□□□□□ -1.54
ATG38YLR211C YGL176CP46945 554 aa5.43□□□□□ -1.54
ATG38YLR211C ACM1Q08981 209 aa5.43□□□□□ -1.54
ATG38YLR211C CMP2P14747 604 aa5.42□□□□□ -1.54
ATG38YLR211C ACE2P21192 770 aa5.42□□□□□ -1.54
ATG38YLR211C MTC3P53077 123 aa5.42□□□□□ -1.54
ATG38YLR211C VPS16Q03308 798 aa5.42□□□□□ -1.54
ATG38YLR211C GCN5Q03330 439 aa5.42□□□□□ -1.54
ATG38YLR211C SPP382Q06411 708 aaPredicted RBP5.42□□□□□ -1.54
ATG38YLR211C RKM4Q12504 494 aa5.42□□□□□ -1.54
ATG38YLR211C ABD1P32783 436 aaPredicted RBP5.41□□□□□ -1.54
ATG38YLR211C YKL151CP36059 337 aa5.41□□□□□ -1.54
ATG38YLR211C GIP4P39732 760 aa5.41□□□□□ -1.54
ATG38YLR211C GDE1Q02979 1223 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms