RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	UGA4	P32837	571 aa		11.03	□□□□□ -0.64
SAM1	YLR180W	SNF7	P39929	240 aa	Known RBP	11.03	□□□□□ -0.64
SAM1	YLR180W	MYO5	Q04439	1219 aa	Known RBP	11.03	□□□□□ -0.64
SAM1	YLR180W	KIN82	P25341	720 aa		11.02	□□□□□ -0.65
SAM1	YLR180W	PWP2	P25635	923 aa	Known RBP	11.02	□□□□□ -0.65
SAM1	YLR180W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.02	□□□□□ -0.65	not detected
SAM1	YLR180W	MDM1	Q01846	1127 aa		11.02	□□□□□ -0.65
SAM1	YLR180W	SPN1	Q06505	410 aa	Predicted RBP	11.02	□□□□□ -0.65
SAM1	YLR180W	RPL8A	P17076	256 aa	Known RBP	11.01	□□□□□ -0.65
SAM1	YLR180W	AIM9	P40053	627 aa	Known RBP	11.01	□□□□□ -0.65
SAM1	YLR180W	TPM2	P40414	161 aa		11.01	□□□□□ -0.65
SAM1	YLR180W	CSM2	P40465	213 aa		11.01	□□□□□ -0.65
SAM1	YLR180W	HUL5	P53119	910 aa		11.01	□□□□□ -0.65
SAM1	YLR180W	VIP1	Q06685	1146 aa	Known RBP	11.01	□□□□□ -0.65
SAM1	YLR180W	RAD59	Q12223	238 aa		11.01	□□□□□ -0.65
SAM1	YLR180W	MSD1	P15179	658 aa	Known RBP	11	□□□□□ -0.65
SAM1	YLR180W	ROX1	P25042	368 aa		11	□□□□□ -0.65
SAM1	YLR180W	RER2	P35196	286 aa		11	□□□□□ -0.65
SAM1	YLR180W	SPO71	Q03868	1245 aa		11	□□□□□ -0.65
SAM1	YLR180W	CRG1	P38892	291 aa	RIP-Chip data	10.99	□□□□□ -0.65	not detected
SAM1	YLR180W	HMF1	P40037	129 aa	Known RBP	10.99	□□□□□ -0.65
SAM1	YLR180W	PSP2	P50109	593 aa	Known RBP	10.99	□□□□□ -0.65
SAM1	YLR180W	MAG2	Q06436	670 aa	Known RBP	10.99	□□□□□ -0.65
SAM1	YLR180W	SES1	P07284	462 aa	Known RBP	10.98	□□□□□ -0.65
SAM1	YLR180W	MSP1	P28737	362 aa		10.98	□□□□□ -0.65
SAM1	YLR180W	TVP38	P36164	337 aa		10.98	□□□□□ -0.65
SAM1	YLR180W	OPT1	P40897	799 aa		10.98	□□□□□ -0.65
SAM1	YLR180W	KRI1	P42846	591 aa	Known RBP	10.98	□□□□□ -0.65
SAM1	YLR180W	LCD1	Q04377	747 aa		10.98	□□□□□ -0.65
SAM1	YLR180W	MMR1	Q06324	491 aa		10.98	□□□□□ -0.65
SAM1	YLR180W	GPI13	Q07830	1017 aa		10.98	□□□□□ -0.65
SAM1	YLR180W	FAB1	P34756	2278 aa		10.97	□□□□□ -0.65
SAM1	YLR180W	CLC1	P17891	233 aa		10.97	□□□□□ -0.65
SAM1	YLR180W	MSS51	P32335	436 aa		10.97	□□□□□ -0.65
SAM1	YLR180W	ALG2	P43636	503 aa		10.97	□□□□□ -0.65
SAM1	YLR180W	ART5	P53244	586 aa	Known RBP	10.97	□□□□□ -0.65
SAM1	YLR180W	CUS1	Q02554	436 aa	Predicted RBP	10.97	□□□□□ -0.65
SAM1	YLR180W	PNG1	Q02890	363 aa		10.97	□□□□□ -0.65
SAM1	YLR180W	VPS20	Q04272	221 aa		10.97	□□□□□ -0.65
SAM1	YLR180W	DSE3	Q08729	430 aa		10.97	□□□□□ -0.65
SAM1	YLR180W	CLB5	P30283	435 aa		10.96	□□□□□ -0.65
SAM1	YLR180W	DJP1	P40564	432 aa		10.96	□□□□□ -0.65
SAM1	YLR180W	NPA3	P47122	385 aa		10.96	□□□□□ -0.65
SAM1	YLR180W	TFC6	Q06339	672 aa		10.96	□□□□□ -0.65
SAM1	YLR180W	PRC1	P00729	532 aa		10.95	□□□□□ -0.66
SAM1	YLR180W	DRE2	P36152	348 aa		10.95	□□□□□ -0.66
SAM1	YLR180W	STB5	P38699	743 aa		10.95	□□□□□ -0.66
SAM1	YLR180W	PAN5	P38787	379 aa		10.95	□□□□□ -0.66
SAM1	YLR180W	BDH2	P39713	417 aa		10.95	□□□□□ -0.66
SAM1	YLR180W	FAF1	P40546	346 aa	Predicted RBP	10.95	□□□□□ -0.66
SAM1	YLR180W	MDR1	P53258	950 aa		10.95	□□□□□ -0.66
SAM1	YLR180W	COG8	Q04632	607 aa		10.95	□□□□□ -0.66
SAM1	YLR180W	SVF1	Q05515	481 aa		10.95	□□□□□ -0.66
SAM1	YLR180W	RPL19A	P0CX82	189 aa	Known RBP	10.94	□□□□□ -0.66
SAM1	YLR180W	RPL19B	P0CX83	189 aa	Predicted RBP	10.94	□□□□□ -0.66
SAM1	YLR180W	BIK1	P11709	440 aa		10.94	□□□□□ -0.66
SAM1	YLR180W	SUV3	P32580	737 aa		10.94	□□□□□ -0.66
SAM1	YLR180W	TTI1	P36097	1038 aa		10.94	□□□□□ -0.66
SAM1	YLR180W	APN2	P38207	520 aa		10.94	□□□□□ -0.66
SAM1	YLR180W	HYR1	P40581	163 aa	Known RBP	10.94	□□□□□ -0.66
SAM1	YLR180W	HST1	P53685	503 aa		10.94	□□□□□ -0.66
SAM1	YLR180W	HAP5	Q02516	242 aa		10.94	□□□□□ -0.66
SAM1	YLR180W	PEP3	P27801	918 aa		10.93	□□□□□ -0.66
SAM1	YLR180W	RME1	P32338	300 aa	Known RBP	10.93	□□□□□ -0.66
SAM1	YLR180W	SLX1	P38324	304 aa		10.93	□□□□□ -0.66
SAM1	YLR180W	CIC1	P38779	376 aa	Known RBP	10.93	□□□□□ -0.66
SAM1	YLR180W	YEL025C	P39991	1188 aa		10.93	□□□□□ -0.66
SAM1	YLR180W	HUL4	P40985	892 aa		10.93	□□□□□ -0.66
SAM1	YLR180W	PSK2	Q08217	1101 aa		10.93	□□□□□ -0.66
SAM1	YLR180W	OXR1	Q08952	273 aa		10.93	□□□□□ -0.66
SAM1	YLR180W	ARP6	Q12509	438 aa		10.93	□□□□□ -0.66
SAM1	YLR180W	UBC1	P21734	215 aa	Known RBP	10.92	□□□□□ -0.66
SAM1	YLR180W	SIS2	P36024	562 aa		10.92	□□□□□ -0.66
SAM1	YLR180W	DID4	P36108	232 aa		10.92	□□□□□ -0.66
SAM1	YLR180W	SAD1	P43589	448 aa		10.92	□□□□□ -0.66
SAM1	YLR180W	ASE1	P50275	885 aa		10.92	□□□□□ -0.66
SAM1	YLR180W	YLR455W	Q06188	304 aa		10.92	□□□□□ -0.66
SAM1	YLR180W	YOR111W	Q99210	232 aa		10.92	□□□□□ -0.66
SAM1	YLR180W	PPZ1	P26570	692 aa		10.91	□□□□□ -0.66
SAM1	YLR180W	IMP2'	P32351	346 aa		10.91	□□□□□ -0.66
SAM1	YLR180W	SUL1	P38359	859 aa		10.91	□□□□□ -0.66
SAM1	YLR180W	HRQ1	Q05549	1077 aa		10.91	□□□□□ -0.66
SAM1	YLR180W	FKS1	P38631	1876 aa	Known RBP	10.9	□□□□□ -0.66
SAM1	YLR180W	MATALPHA2	P0CY08	210 aa		10.9	□□□□□ -0.66
SAM1	YLR180W	HMLALPHA2	P0CY09	210 aa		10.9	□□□□□ -0.66
SAM1	YLR180W	MBR1	P23493	339 aa		10.9	□□□□□ -0.66
SAM1	YLR180W	YHL017W	P38745	532 aa		10.9	□□□□□ -0.66
SAM1	YLR180W	BUD16	P39988	312 aa		10.9	□□□□□ -0.66
SAM1	YLR180W	GCV2	P49095	1034 aa		10.9	□□□□□ -0.66
SAM1	YLR180W	PEX14	P53112	341 aa		10.9	□□□□□ -0.66
SAM1	YLR180W	MUK1	Q02866	612 aa		10.9	□□□□□ -0.66
SAM1	YLR180W	WHI4	Q07655	649 aa	Known RBP	10.9	□□□□□ -0.66
SAM1	YLR180W	ARL1	P38116	183 aa	Known RBP	10.89	□□□□□ -0.67
SAM1	YLR180W	ISW1	P38144	1129 aa		10.89	□□□□□ -0.67
SAM1	YLR180W	YKE2	P52553	114 aa		10.89	□□□□□ -0.67
SAM1	YLR180W	ARP5	P53946	755 aa		10.89	□□□□□ -0.67
SAM1	YLR180W	EST2	Q06163	884 aa		10.89	□□□□□ -0.67
SAM1	YLR180W	PIG1	Q06216	648 aa		10.89	□□□□□ -0.67
SAM1	YLR180W	AIM44	Q99299	758 aa		10.89	□□□□□ -0.67
SAM1	YLR180W	RIF1	P29539	1916 aa		10.89	□□□□□ -0.67

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms