RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W MKK2P32491 506 aa3.73□□□□□ -1.81
MSL1YIR009W ABZ1P37254 787 aaPredicted RBP3.73□□□□□ -1.81
MSL1YIR009W HXT13P39924 564 aa3.73□□□□□ -1.81
MSL1YIR009W SEC26P41810 973 aaKnown RBP3.73□□□□□ -1.81
MSL1YIR009W ENT3P47160 408 aa3.73□□□□□ -1.81
MSL1YIR009W HXT17P53631 564 aa3.73□□□□□ -1.81
MSL1YIR009W HXT15P54854 567 aa3.73□□□□□ -1.81
MSL1YIR009W SPO21Q12411 609 aa3.73□□□□□ -1.81
MSL1YIR009W PRE10P21242 288 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
MSL1YIR009W SEC8P32855 1065 aa3.72□□□□□ -1.81
MSL1YIR009W RPS26AP39938 119 aaKnown RBP3.72□□□□□ -1.81
MSL1YIR009W RPS26BP39939 119 aaKnown RBP3.72□□□□□ -1.81
MSL1YIR009W CLU1Q03690 1277 aaKnown RBP3.72□□□□□ -1.81
MSL1YIR009W SGD1Q06132 899 aa3.72□□□□□ -1.81
MSL1YIR009W SLD2P34252 453 aa3.71□□□□□ -1.82
MSL1YIR009W LAM1P38851 1228 aa3.71□□□□□ -1.82
MSL1YIR009W MEF2P39677 819 aa3.71□□□□□ -1.82
MSL1YIR009W YFL054CP43549 646 aa3.71□□□□□ -1.82
MSL1YIR009W HNT2P49775 206 aa3.71□□□□□ -1.82
MSL1YIR009W RSB1Q08417 382 aa3.71□□□□□ -1.82
MSL1YIR009W YLR358CO13565 187 aa3.7□□□□□ -1.82
MSL1YIR009W CYC1P00044 109 aaPredicted RBP3.7□□□□□ -1.82
MSL1YIR009W ATE1P16639 503 aa3.7□□□□□ -1.82
MSL1YIR009W PUF4P25339 888 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
MSL1YIR009W MCM2P29469 868 aa3.7□□□□□ -1.82
MSL1YIR009W RGD1P38339 666 aa3.7□□□□□ -1.82
MSL1YIR009W POL32P47110 350 aa3.7□□□□□ -1.82
MSL1YIR009W GCN5Q03330 439 aa3.7□□□□□ -1.82
MSL1YIR009W GCR1P07261 785 aa3.69□□□□□ -1.82
MSL1YIR009W YER152CP10356 443 aa3.69□□□□□ -1.82
MSL1YIR009W SYP1P25623 870 aaKnown RBP3.69□□□□□ -1.82
MSL1YIR009W CTS1P29029 562 aa3.69□□□□□ -1.82
MSL1YIR009W MGE1P38523 228 aa3.69□□□□□ -1.82
MSL1YIR009W CNN1P43618 361 aa3.69□□□□□ -1.82
MSL1YIR009W YJR107WP47145 328 aa3.69□□□□□ -1.82
MSL1YIR009W SPT20P50875 604 aa3.69□□□□□ -1.82
MSL1YIR009W PLB2Q03674 706 aa3.69□□□□□ -1.82
MSL1YIR009W DUS4Q06063 367 aa3.69□□□□□ -1.82
MSL1YIR009W MRL1Q06815 381 aa3.69□□□□□ -1.82
MSL1YIR009W YOR352WQ08816 343 aa3.69□□□□□ -1.82
MSL1YIR009W DBP5P20449 482 aaKnown RBP3.68□□□□□ -1.82
MSL1YIR009W SRM1P21827 482 aa3.68□□□□□ -1.82
MSL1YIR009W MLS1P30952 554 aa3.68□□□□□ -1.82
MSL1YIR009W FYV10P40492 516 aa3.68□□□□□ -1.82
MSL1YIR009W SPR28Q04921 423 aa3.68□□□□□ -1.82
MSL1YIR009W RRP15Q06511 250 aaPredicted RBP3.68□□□□□ -1.82
MSL1YIR009W RIB2Q12362 591 aaKnown RBP3.68□□□□□ -1.82
MSL1YIR009W SHM2P37291 469 aaKnown RBP3.67□□□□□ -1.82
MSL1YIR009W RFC5P38251 354 aa3.67□□□□□ -1.82
MSL1YIR009W TAT2P38967 592 aa3.67□□□□□ -1.82
MSL1YIR009W MPH1P40562 993 aa3.67□□□□□ -1.82
MSL1YIR009W ROT1Q03691 256 aa3.67□□□□□ -1.82
MSL1YIR009W RSM24Q03976 319 aa3.67□□□□□ -1.82
MSL1YIR009W GAL10P04397 699 aa3.66□□□□□ -1.82
MSL1YIR009W CMP2P14747 604 aa3.66□□□□□ -1.82
MSL1YIR009W DOM34P33309 386 aa3.66□□□□□ -1.82
MSL1YIR009W RER2P35196 286 aa3.66□□□□□ -1.82
MSL1YIR009W MPT5P39016 859 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
MSL1YIR009W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
MSL1YIR009W GSF2Q04697 403 aaKnown RBP3.65□□□□□ -1.83
MSL1YIR009W ESF1Q06344 628 aaKnown RBP3.65□□□□□ -1.83
MSL1YIR009W ATG13Q06628 738 aa3.65□□□□□ -1.83
MSL1YIR009W SVS1Q12254 260 aa3.65□□□□□ -1.83
MSL1YIR009W CDC6P09119 513 aa3.64□□□□□ -1.83
MSL1YIR009W CDC20P26309 610 aa3.64□□□□□ -1.83
MSL1YIR009W YML020WQ03722 664 aa3.64□□□□□ -1.83
MSL1YIR009W TIF35Q04067 274 aaKnown RBP3.64□□□□□ -1.83
MSL1YIR009W SIZ1Q04195 904 aa3.64□□□□□ -1.83
MSL1YIR009W RTT10Q08924 1013 aa3.64□□□□□ -1.83
MSL1YIR009W KIN2P13186 1147 aaKnown RBP3.63□□□□□ -1.83
MSL1YIR009W BAS1P22035 811 aa3.63□□□□□ -1.83
MSL1YIR009W MXR1P40029 184 aa3.63□□□□□ -1.83
MSL1YIR009W RXT3Q07458 294 aa3.63□□□□□ -1.83
MSL1YIR009W ACK1Q07622 623 aaPredicted RBP3.63□□□□□ -1.83
MSL1YIR009W NOP8Q08287 484 aaPredicted RBP3.63□□□□□ -1.83
MSL1YIR009W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
MSL1YIR009W GPB1Q08886 897 aa3.63□□□□□ -1.83
MSL1YIR009W GNT1Q12096 491 aa3.63□□□□□ -1.83
MSL1YIR009W TUB2P02557 457 aaKnown RBP3.62□□□□□ -1.83
MSL1YIR009W RPL11AP0C0W9 174 aaKnown RBP3.62□□□□□ -1.83
MSL1YIR009W DBP2P24783 546 aaKnown RBP3.62□□□□□ -1.83
MSL1YIR009W RAD27P26793 382 aa3.62□□□□□ -1.83
MSL1YIR009W APL1P27351 700 aa3.62□□□□□ -1.83
MSL1YIR009W HEM3P28789 327 aa3.62□□□□□ -1.83
MSL1YIR009W DUT1P33317 147 aa3.62□□□□□ -1.83
MSL1YIR009W MCM7P38132 845 aa3.62□□□□□ -1.83
MSL1YIR009W PBP1P53297 722 aaKnown RBP3.62□□□□□ -1.83
MSL1YIR009W RMD1Q03441 430 aa3.62□□□□□ -1.83
MSL1YIR009W RPL11BQ3E757 174 aaPredicted RBP3.62□□□□□ -1.83
MSL1YIR009W ACE2P21192 770 aa3.61□□□□□ -1.83
MSL1YIR009W PEP7P32609 515 aa3.61□□□□□ -1.83
MSL1YIR009W SLA2P33338 968 aa3.61□□□□□ -1.83
MSL1YIR009W LST4P34239 828 aa3.61□□□□□ -1.83
MSL1YIR009W UGA2P38067 497 aa3.61□□□□□ -1.83
MSL1YIR009W VPS62P53285 467 aa3.61□□□□□ -1.83
MSL1YIR009W MSC2Q03455 724 aa3.61□□□□□ -1.83
MSL1YIR009W ACM1Q08981 209 aa3.61□□□□□ -1.83
MSL1YIR009W TMA46Q12000 345 aaKnown RBP3.61□□□□□ -1.83
MSL1YIR009W BI4P03879 638 aa3.6□□□□□ -1.83
MSL1YIR009W STE11P23561 717 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms