RNA–Protein interactions for RNA: YEL011W

GLC3, Transcript of Glycogen branching enzyme, involved in glycogen accumulation, yeast

Gene GLC3, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GLC3	YEL011W	COY1	P34237	679 aa		4.29	□□□□□ -1.72
GLC3	YEL011W	MCR1	P36060	302 aa	Known RBP	4.29	□□□□□ -1.72
GLC3	YEL011W	FLR1	P38124	548 aa		4.29	□□□□□ -1.72
GLC3	YEL011W	NSG2	P53898	299 aa		4.29	□□□□□ -1.72
GLC3	YEL011W	PML39	Q03760	334 aa		4.29	□□□□□ -1.72
GLC3	YEL011W	SKG3	Q06315	1026 aa		4.29	□□□□□ -1.72
GLC3	YEL011W	SRM1	P21827	482 aa		4.28	□□□□□ -1.72
GLC3	YEL011W	GEF1	P37020	779 aa		4.28	□□□□□ -1.72
GLC3	YEL011W	LAA1	P39526	2014 aa		4.28	□□□□□ -1.72
GLC3	YEL011W	CSM2	P40465	213 aa		4.28	□□□□□ -1.72
GLC3	YEL011W	SBE2	P42223	864 aa	Known RBP	4.28	□□□□□ -1.72
GLC3	YEL011W	ZAP1	P47043	880 aa		4.28	□□□□□ -1.72
GLC3	YEL011W	BFA1	P47113	574 aa		4.28	□□□□□ -1.72
GLC3	YEL011W	RFS1	P38234	210 aa	Known RBP	4.28	□□□□□ -1.72
GLC3	YEL011W	PCF11	P39081	626 aa	Predicted RBP	4.28	□□□□□ -1.72
GLC3	YEL011W	INP51	P40559	946 aa	Known RBP	4.28	□□□□□ -1.72
GLC3	YEL011W	TAM41	P53230	385 aa		4.28	□□□□□ -1.72
GLC3	YEL011W	SGF29	P25554	259 aa		4.27	□□□□□ -1.73
GLC3	YEL011W	NUP133	P36161	1157 aa		4.27	□□□□□ -1.73
GLC3	YEL011W	PHO88	P38264	188 aa	Predicted RBP	4.27	□□□□□ -1.73
GLC3	YEL011W	SFB2	P53953	876 aa		4.27	□□□□□ -1.73
GLC3	YEL011W	STP1	Q00947	519 aa		4.27	□□□□□ -1.73
GLC3	YEL011W	MDM1	Q01846	1127 aa		4.27	□□□□□ -1.73
GLC3	YEL011W	INM2	Q05533	292 aa		4.27	□□□□□ -1.73
GLC3	YEL011W	YLR257W	Q06146	321 aa	Known RBP	4.27	□□□□□ -1.73
GLC3	YEL011W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
GLC3	YEL011W	CDC53	Q12018	815 aa	Known RBP	4.27	□□□□□ -1.73
GLC3	YEL011W	RFC1	P38630	861 aa	Known RBP	4.26	□□□□□ -1.73
GLC3	YEL011W	MPD2	Q99316	277 aa		4.26	□□□□□ -1.73
GLC3	YEL011W	RME1	P32338	300 aa	Known RBP	4.25	□□□□□ -1.73
GLC3	YEL011W	REG2	P38232	338 aa		4.25	□□□□□ -1.73
GLC3	YEL011W	OCA5	P38738	679 aa		4.25	□□□□□ -1.73
GLC3	YEL011W	SDS3	P40505	327 aa		4.25	□□□□□ -1.73
GLC3	YEL011W	TAF1	P46677	1066 aa		4.25	□□□□□ -1.73
GLC3	YEL011W	LIF1	P53150	421 aa		4.25	□□□□□ -1.73
GLC3	YEL011W	CET1	O13297	549 aa	Predicted RBP	4.25	□□□□□ -1.73
GLC3	YEL011W	SEC21	P32074	935 aa	Known RBP	4.25	□□□□□ -1.73
GLC3	YEL011W	MSS51	P32335	436 aa		4.25	□□□□□ -1.73
GLC3	YEL011W	BI4	P03879	638 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	RPS14A	P06367	137 aa	Known RBP	4.24	□□□□□ -1.73
GLC3	YEL011W	SAM1	P10659	382 aa	Known RBP	4.24	□□□□□ -1.73
GLC3	YEL011W	CSE1	P33307	960 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	RPS14B	P39516	138 aa	Known RBP	4.24	□□□□□ -1.73
GLC3	YEL011W	PTI1	P39927	425 aa	Predicted RBP	4.24	□□□□□ -1.73
GLC3	YEL011W	VIP1	Q06685	1146 aa	Known RBP	4.24	□□□□□ -1.73
GLC3	YEL011W	GPR1	Q12361	961 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	ACE2	P21192	770 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	MSH2	P25847	964 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	ADK2	P26364	225 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	MNN4	P36044	1178 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	YHR202W	P38887	602 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	ORC1	P54784	914 aa	Predicted RBP	4.24	□□□□□ -1.73
GLC3	YEL011W	NSE5	Q03718	556 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	TMN2	Q04562	672 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	DUS3	Q06053	668 aa	Known RBP	4.24	□□□□□ -1.73
GLC3	YEL011W	THI22	Q06490	572 aa		4.24	□□□□□ -1.73
GLC3	YEL011W	MRP7	P12687	371 aa		4.23	□□□□□ -1.73
GLC3	YEL011W	UME6	P39001	836 aa		4.23	□□□□□ -1.73
GLC3	YEL011W	ESL1	P40456	1118 aa		4.23	□□□□□ -1.73
GLC3	YEL011W	YIR042C	P40586	236 aa		4.23	□□□□□ -1.73
GLC3	YEL011W	TMA64	Q04600	565 aa	Known RBP	4.23	□□□□□ -1.73
GLC3	YEL011W	YLL058W	Q12198	575 aa		4.23	□□□□□ -1.73
GLC3	YEL011W	SEC15	P22224	910 aa		4.22	□□□□□ -1.73
GLC3	YEL011W	SPT23	P35210	1082 aa		4.22	□□□□□ -1.73
GLC3	YEL011W	NEM1	P38757	446 aa		4.22	□□□□□ -1.73
GLC3	YEL011W	GYP8	P43570	497 aa		4.22	□□□□□ -1.73
GLC3	YEL011W	YRB30	P53107	440 aa	Predicted RBP	4.22	□□□□□ -1.73
GLC3	YEL011W	JIP5	Q06214	492 aa	Predicted RBP	4.22	□□□□□ -1.73
GLC3	YEL011W	MRI1	Q06489	411 aa	Known RBP	4.22	□□□□□ -1.73
GLC3	YEL011W	PRP9	P19736	530 aa	Known RBP	4.22	□□□□□ -1.73
GLC3	YEL011W	MRF1	P30775	413 aa	Predicted RBP	4.22	□□□□□ -1.73
GLC3	YEL011W	BIO2	P32451	375 aa		4.22	□□□□□ -1.73
GLC3	YEL011W	IME2	P32581	645 aa		4.22	□□□□□ -1.73
GLC3	YEL011W	POL32	P47110	350 aa		4.22	□□□□□ -1.73
GLC3	YEL011W	CWC24	P53769	259 aa		4.22	□□□□□ -1.73
GLC3	YEL011W	YPL260W	Q08977	551 aa		4.22	□□□□□ -1.73
GLC3	YEL011W	BRR2	P32639	2163 aa	Known RBP	4.22	□□□□□ -1.73
GLC3	YEL011W	SHP1	P34223	423 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	GYP7	P48365	746 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	GCV2	P49095	1034 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	OPT2	Q06593	877 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	YOR389W	Q08912	624 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	YPL278C	Q08990	100 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	RLF2	Q12495	606 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	CHO2	P05374	869 aa	Known RBP	4.21	□□□□□ -1.74
GLC3	YEL011W	DAL5	P15365	543 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	DRE2	P36152	348 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	YLR326W	Q06170	240 aa	Known RBP	4.21	□□□□□ -1.74
GLC3	YEL011W	OSH2	Q12451	1283 aa		4.21	□□□□□ -1.74
GLC3	YEL011W	MRM1	P25270	412 aa		4.2	□□□□□ -1.74
GLC3	YEL011W	KIN82	P25341	720 aa		4.2	□□□□□ -1.74
GLC3	YEL011W	MAF1	P41910	395 aa		4.2	□□□□□ -1.74
GLC3	YEL011W	SPE3	Q12074	293 aa	Known RBP	4.2	□□□□□ -1.74
GLC3	YEL011W	RRI2	Q12348	645 aa		4.2	□□□□□ -1.74
GLC3	YEL011W	CSF1	Q12150	2958 aa		4.2	□□□□□ -1.74
GLC3	YEL011W	HO	P09932	586 aa		4.19	□□□□□ -1.74
GLC3	YEL011W	RPL43A	P0CX25	92 aa	Known RBP	4.19	□□□□□ -1.74
GLC3	YEL011W	RPL43B	P0CX26	92 aa		4.19	□□□□□ -1.74
GLC3	YEL011W	CLC1	P17891	233 aa		4.19	□□□□□ -1.74
GLC3	YEL011W	YAP1801	P38856	637 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms