RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	MPH1	P40562	993 aa		6.33	□□□□□ -1.4
HIM1	YDR317W	CNN1	P43618	361 aa		6.33	□□□□□ -1.4
HIM1	YDR317W	AVT1	P47082	602 aa		6.33	□□□□□ -1.4
HIM1	YDR317W	ENT3	P47160	408 aa		6.33	□□□□□ -1.4
HIM1	YDR317W	JIP5	Q06214	492 aa	Predicted RBP	6.33	□□□□□ -1.4
HIM1	YDR317W	ESC2	Q06340	456 aa		6.33	□□□□□ -1.4
HIM1	YDR317W	DFG16	Q99234	619 aa		6.33	□□□□□ -1.4
HIM1	YDR317W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.32	□□□□□ -1.4	not detected
HIM1	YDR317W	YPL066W	Q12194	479 aa		6.32	□□□□□ -1.4
HIM1	YDR317W	SNF5	P18480	905 aa		6.31	□□□□□ -1.4
HIM1	YDR317W	AIM26	P32858	118 aa		6.31	□□□□□ -1.4
HIM1	YDR317W	MCM7	P38132	845 aa		6.31	□□□□□ -1.4
HIM1	YDR317W	MET10	P39692	1035 aa		6.31	□□□□□ -1.4
HIM1	YDR317W	YDL177C	Q12257	170 aa		6.31	□□□□□ -1.4
HIM1	YDR317W	RAD27	P26793	382 aa		6.3	□□□□□ -1.4
HIM1	YDR317W	MDL2	P33311	773 aa		6.3	□□□□□ -1.4
HIM1	YDR317W	RGD1	P38339	666 aa		6.3	□□□□□ -1.4
HIM1	YDR317W	YPL260W	Q08977	551 aa		6.3	□□□□□ -1.4
HIM1	YDR317W	KOG1	P38873	1557 aa		6.3	□□□□□ -1.4
HIM1	YDR317W	MNR2	P35724	969 aa		6.29	□□□□□ -1.4
HIM1	YDR317W	ETP1	P38748	585 aa	Known RBP	6.29	□□□□□ -1.4
HIM1	YDR317W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.29	□□□□□ -1.4	RIP-Chip
HIM1	YDR317W	HOS3	Q02959	697 aa	Known RBP	6.29	□□□□□ -1.4
HIM1	YDR317W	VPS16	Q03308	798 aa		6.29	□□□□□ -1.4
HIM1	YDR317W	RSC58	Q07979	502 aa		6.29	□□□□□ -1.4
HIM1	YDR317W	INO1	P11986	533 aa		6.28	□□□□□ -1.4
HIM1	YDR317W	RNQ1	P25367	405 aa		6.28	□□□□□ -1.4
HIM1	YDR317W	LYP1	P32487	611 aa		6.28	□□□□□ -1.4
HIM1	YDR317W	PAM1	P37304	830 aa	Known RBP	6.28	□□□□□ -1.4
HIM1	YDR317W	BAP2	P38084	609 aa		6.28	□□□□□ -1.4
HIM1	YDR317W	TNA1	P53322	534 aa		6.28	□□□□□ -1.4
HIM1	YDR317W	ORC3	P54790	616 aa		6.28	□□□□□ -1.4
HIM1	YDR317W	GDE1	Q02979	1223 aa		6.28	□□□□□ -1.4
HIM1	YDR317W	COQ4	O13525	335 aa		6.27	□□□□□ -1.41
HIM1	YDR317W	DBP2	P24783	546 aa	Known RBP	6.27	□□□□□ -1.41
HIM1	YDR317W	SRO9	P25567	434 aa	Known RBP	6.27	□□□□□ -1.41
HIM1	YDR317W	MXR1	P40029	184 aa		6.27	□□□□□ -1.41
HIM1	YDR317W	TYW3	P53177	273 aa		6.27	□□□□□ -1.41
HIM1	YDR317W	YLR225C	Q05948	407 aa	Known RBP	6.27	□□□□□ -1.41
HIM1	YDR317W	TMA46	Q12000	345 aa	Known RBP	6.27	□□□□□ -1.41
HIM1	YDR317W	ABZ1	P37254	787 aa	Predicted RBP	6.26	□□□□□ -1.41
HIM1	YDR317W	SNU71	P53207	620 aa	Known RBP	6.26	□□□□□ -1.41
HIM1	YDR317W	YGR053C	P53234	283 aa		6.26	□□□□□ -1.41
HIM1	YDR317W	PIN2	Q12057	282 aa		6.26	□□□□□ -1.41
HIM1	YDR317W	ABD1	P32783	436 aa	Predicted RBP	6.25	□□□□□ -1.41
HIM1	YDR317W	YKL069W	P36088	180 aa		6.25	□□□□□ -1.41
HIM1	YDR317W	RPN3	P40016	523 aa	Known RBP	6.25	□□□□□ -1.41
HIM1	YDR317W	HNT2	P49775	206 aa		6.25	□□□□□ -1.41
HIM1	YDR317W	GAS1	P22146	559 aa	Known RBP	6.24	□□□□□ -1.41
HIM1	YDR317W	NAP1	P25293	417 aa	Known RBP	6.24	□□□□□ -1.41
HIM1	YDR317W	TSA1	P34760	196 aa	Known RBP	6.24	□□□□□ -1.41
HIM1	YDR317W	MAD1	P40957	749 aa		6.24	□□□□□ -1.41
HIM1	YDR317W	ALD6	P54115	500 aa	Known RBP	6.24	□□□□□ -1.41
HIM1	YDR317W	CDA2	Q06703	312 aa		6.24	□□□□□ -1.41
HIM1	YDR317W	RPL11A	P0C0W9	174 aa	Known RBP	6.23	□□□□□ -1.41
HIM1	YDR317W	PRI2	P20457	528 aa		6.23	□□□□□ -1.41
HIM1	YDR317W	BAS1	P22035	811 aa		6.23	□□□□□ -1.41
HIM1	YDR317W	CCZ1	P38273	704 aa		6.23	□□□□□ -1.41
HIM1	YDR317W	PIK1	P39104	1066 aa		6.23	□□□□□ -1.41
HIM1	YDR317W	SIP5	P40210	489 aa	Known RBP	6.23	□□□□□ -1.41
HIM1	YDR317W	YGL176C	P46945	554 aa		6.23	□□□□□ -1.41
HIM1	YDR317W	ECL1	P48235	211 aa		6.23	□□□□□ -1.41
HIM1	YDR317W	RPL11B	Q3E757	174 aa	Predicted RBP	6.23	□□□□□ -1.41
HIM1	YDR317W	ELM1	P32801	640 aa		6.22	□□□□□ -1.41
HIM1	YDR317W	CWC24	P53769	259 aa		6.22	□□□□□ -1.41
HIM1	YDR317W	GNT1	Q12096	491 aa		6.22	□□□□□ -1.41
HIM1	YDR317W	SPS1	P08458	490 aa		6.21	□□□□□ -1.42
HIM1	YDR317W	VAC8	P39968	578 aa		6.21	□□□□□ -1.42
HIM1	YDR317W	NBA1	Q08229	501 aa	Known RBP	6.21	□□□□□ -1.42
HIM1	YDR317W	RIB2	Q12362	591 aa	Known RBP	6.21	□□□□□ -1.42
HIM1	YDR317W	CLN2	P20438	545 aa		6.2	□□□□□ -1.42
HIM1	YDR317W	PNT1	P38969	423 aa		6.2	□□□□□ -1.42
HIM1	YDR317W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.2	□□□□□ -1.42	not detected
HIM1	YDR317W	SVF1	Q05515	481 aa		6.2	□□□□□ -1.42
HIM1	YDR317W	RSB1	Q08417	382 aa		6.2	□□□□□ -1.42
HIM1	YDR317W	FAL1	Q12099	399 aa	Known RBP	6.2	□□□□□ -1.42
HIM1	YDR317W	SLA2	P33338	968 aa		6.19	□□□□□ -1.42
HIM1	YDR317W	YKL107W	P34251	309 aa		6.19	□□□□□ -1.42
HIM1	YDR317W	IRC24	P40580	263 aa		6.19	□□□□□ -1.42
HIM1	YDR317W	MRPL22	P53881	309 aa		6.19	□□□□□ -1.42
HIM1	YDR317W	RKM4	Q12504	494 aa		6.19	□□□□□ -1.42
HIM1	YDR317W	SPA2	P23201	1466 aa	Known RBP	6.19	□□□□□ -1.42
HIM1	YDR317W	SPT6	P23615	1451 aa	Known RBP	6.19	□□□□□ -1.42
HIM1	YDR317W	BI4	P03879	638 aa		6.18	□□□□□ -1.42
HIM1	YDR317W	UGA2	P38067	497 aa		6.18	□□□□□ -1.42
HIM1	YDR317W	SPO20	Q04359	397 aa		6.18	□□□□□ -1.42
HIM1	YDR317W	SPP382	Q06411	708 aa	Predicted RBP	6.18	□□□□□ -1.42
HIM1	YDR317W	OPI10	Q08202	246 aa		6.18	□□□□□ -1.42
HIM1	YDR317W	HSL1	P34244	1518 aa		6.17	□□□□□ -1.42
HIM1	YDR317W	AIM3	P38266	947 aa	Known RBP	6.17	□□□□□ -1.42
HIM1	YDR317W	SRM1	P21827	482 aa		6.16	□□□□□ -1.42
HIM1	YDR317W	MBP1	P39678	833 aa		6.16	□□□□□ -1.42
HIM1	YDR317W	SEC26	P41810	973 aa	Known RBP	6.16	□□□□□ -1.42
HIM1	YDR317W	FOL2	P51601	243 aa	Known RBP	6.16	□□□□□ -1.42
HIM1	YDR317W	ACM1	Q08981	209 aa		6.16	□□□□□ -1.42
HIM1	YDR317W	SVS1	Q12254	260 aa		6.16	□□□□□ -1.42
HIM1	YDR317W	CYC1	P00044	109 aa	Predicted RBP	6.15	□□□□□ -1.42
HIM1	YDR317W	YKL151C	P36059	337 aa		6.15	□□□□□ -1.42
HIM1	YDR317W	NIT1	P40447	199 aa		6.14	□□□□□ -1.43
HIM1	YDR317W	PRP43	P53131	767 aa	Known RBP	6.14	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms