RNA–Protein interactions for RNA: YDL163W

YDL163W, Transcript of Dubious open reading frame, yeast

Gene YDL163W, Length 303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL163W	YDL163W	RER2	P35196	286 aa		4.77	□□□□□ -1.65
YDL163W	YDL163W	GTS1	P40956	396 aa		4.77	□□□□□ -1.65
YDL163W	YDL163W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
YDL163W	YDL163W	RAT1	Q02792	1006 aa	Known RBP	4.77	□□□□□ -1.65
YDL163W	YDL163W	SPO20	Q04359	397 aa		4.77	□□□□□ -1.65
YDL163W	YDL163W	RSB1	Q08417	382 aa		4.77	□□□□□ -1.65
YDL163W	YDL163W	LYP1	P32487	611 aa		4.76	□□□□□ -1.65
YDL163W	YDL163W	BAP2	P38084	609 aa		4.76	□□□□□ -1.65
YDL163W	YDL163W	NMD3	P38861	518 aa	Known RBP	4.76	□□□□□ -1.65
YDL163W	YDL163W	PIK1	P39104	1066 aa		4.76	□□□□□ -1.65
YDL163W	YDL163W	RSC58	Q07979	502 aa		4.76	□□□□□ -1.65
YDL163W	YDL163W	POL12	P38121	705 aa	Predicted RBP	4.75	□□□□□ -1.65
YDL163W	YDL163W	TYW3	P53177	273 aa		4.75	□□□□□ -1.65
YDL163W	YDL163W	NOP7	P53261	605 aa	Known RBP	4.75	□□□□□ -1.65
YDL163W	YDL163W	CWC24	P53769	259 aa		4.75	□□□□□ -1.65
YDL163W	YDL163W	PIN2	Q12057	282 aa		4.75	□□□□□ -1.65
YDL163W	YDL163W	GNT1	Q12096	491 aa		4.75	□□□□□ -1.65
YDL163W	YDL163W	DFG16	Q99234	619 aa		4.75	□□□□□ -1.65
YDL163W	YDL163W	THS1	P04801	734 aa	Known RBP	4.74	□□□□□ -1.65
YDL163W	YDL163W	MLS1	P30952	554 aa		4.74	□□□□□ -1.65
YDL163W	YDL163W	SCT1	P32784	759 aa		4.74	□□□□□ -1.65
YDL163W	YDL163W	DUT1	P33317	147 aa		4.74	□□□□□ -1.65
YDL163W	YDL163W	MCM7	P38132	845 aa		4.74	□□□□□ -1.65
YDL163W	YDL163W	YGR053C	P53234	283 aa		4.74	□□□□□ -1.65
YDL163W	YDL163W	TIF35	Q04067	274 aa	Known RBP	4.74	□□□□□ -1.65
YDL163W	YDL163W	JIP5	Q06214	492 aa	Predicted RBP	4.74	□□□□□ -1.65
YDL163W	YDL163W	RKM4	Q12504	494 aa		4.74	□□□□□ -1.65
YDL163W	YDL163W	SPS1	P08458	490 aa		4.73	□□□□□ -1.65
YDL163W	YDL163W	AIM26	P32858	118 aa		4.73	□□□□□ -1.65
YDL163W	YDL163W	GPB2	P39717	880 aa		4.73	□□□□□ -1.65
YDL163W	YDL163W	NIT1	P40447	199 aa		4.73	□□□□□ -1.65
YDL163W	YDL163W	MPH1	P40562	993 aa		4.73	□□□□□ -1.65
YDL163W	YDL163W	LPX1	Q12405	387 aa	Known RBP	4.73	□□□□□ -1.65
YDL163W	YDL163W	TRP2	P00899	507 aa	Known RBP	4.72	□□□□□ -1.65
YDL163W	YDL163W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
YDL163W	YDL163W	GEM1	P39722	662 aa		4.72	□□□□□ -1.65
YDL163W	YDL163W	SEC26	P41810	973 aa	Known RBP	4.72	□□□□□ -1.65
YDL163W	YDL163W	AVT1	P47082	602 aa		4.72	□□□□□ -1.65
YDL163W	YDL163W	PRP43	P53131	767 aa	Known RBP	4.72	□□□□□ -1.65
YDL163W	YDL163W	GDE1	Q02979	1223 aa		4.72	□□□□□ -1.65
YDL163W	YDL163W	VPS16	Q03308	798 aa		4.72	□□□□□ -1.65
YDL163W	YDL163W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
YDL163W	YDL163W	AOS1	Q06624	347 aa		4.72	□□□□□ -1.65
YDL163W	YDL163W	YER152C	P10356	443 aa		4.71	□□□□□ -1.66
YDL163W	YDL163W	SNF5	P18480	905 aa		4.71	□□□□□ -1.66
YDL163W	YDL163W	ELM1	P32801	640 aa		4.71	□□□□□ -1.66
YDL163W	YDL163W	IRC24	P40580	263 aa		4.71	□□□□□ -1.66
YDL163W	YDL163W	YOR352W	Q08816	343 aa		4.71	□□□□□ -1.66
YDL163W	YDL163W	INO1	P11986	533 aa		4.7	□□□□□ -1.66
YDL163W	YDL163W	YKL107W	P34251	309 aa		4.7	□□□□□ -1.66
YDL163W	YDL163W	PAM1	P37304	830 aa	Known RBP	4.7	□□□□□ -1.66
YDL163W	YDL163W	EEB1	Q02891	456 aa		4.7	□□□□□ -1.66
YDL163W	YDL163W	SPP382	Q06411	708 aa	Predicted RBP	4.7	□□□□□ -1.66
YDL163W	YDL163W	ACM1	Q08981	209 aa		4.7	□□□□□ -1.66
YDL163W	YDL163W	LRG1	P35688	1017 aa		4.69	□□□□□ -1.66
YDL163W	YDL163W	SEA4	P38164	1038 aa		4.69	□□□□□ -1.66
YDL163W	YDL163W	RFC5	P38251	354 aa		4.69	□□□□□ -1.66
YDL163W	YDL163W	SNO2	P53823	222 aa		4.69	□□□□□ -1.66
YDL163W	YDL163W	RCL1	Q08096	367 aa	Predicted RBP	4.69	□□□□□ -1.66
YDL163W	YDL163W	KIN2	P13186	1147 aa	Known RBP	4.68	□□□□□ -1.66
YDL163W	YDL163W	BAS1	P22035	811 aa		4.68	□□□□□ -1.66
YDL163W	YDL163W	SBA1	P28707	216 aa	Known RBP	4.68	□□□□□ -1.66
YDL163W	YDL163W	SEG2	P34250	1132 aa		4.68	□□□□□ -1.66
YDL163W	YDL163W	FAA4	P47912	694 aa	Known RBP	4.68	□□□□□ -1.66
YDL163W	YDL163W	RSM24	Q03976	319 aa		4.68	□□□□□ -1.66
YDL163W	YDL163W	ATG13	Q06628	738 aa		4.68	□□□□□ -1.66
YDL163W	YDL163W	FAL1	Q12099	399 aa	Known RBP	4.68	□□□□□ -1.66
YDL163W	YDL163W	RPL11A	P0C0W9	174 aa	Known RBP	4.67	□□□□□ -1.66
YDL163W	YDL163W	AGP1	P25376	633 aa		4.67	□□□□□ -1.66
YDL163W	YDL163W	PNT1	P38969	423 aa		4.67	□□□□□ -1.66
YDL163W	YDL163W	RRT14	P40470	206 aa		4.67	□□□□□ -1.66
YDL163W	YDL163W	YGL176C	P46945	554 aa		4.67	□□□□□ -1.66
YDL163W	YDL163W	MRPL22	P53881	309 aa		4.67	□□□□□ -1.66
YDL163W	YDL163W	RPL11B	Q3E757	174 aa	Predicted RBP	4.67	□□□□□ -1.66
YDL163W	YDL163W	SHE9	Q04172	456 aa		4.66	□□□□□ -1.66
YDL163W	YDL163W	YLR225C	Q05948	407 aa	Known RBP	4.66	□□□□□ -1.66
YDL163W	YDL163W	OPI10	Q08202	246 aa		4.66	□□□□□ -1.66
YDL163W	YDL163W	SVS1	Q12254	260 aa		4.66	□□□□□ -1.66
YDL163W	YDL163W	GAS1	P22146	559 aa	Known RBP	4.65	□□□□□ -1.67
YDL163W	YDL163W	UGA2	P38067	497 aa		4.65	□□□□□ -1.67
YDL163W	YDL163W	ETP1	P38748	585 aa	Known RBP	4.65	□□□□□ -1.67
YDL163W	YDL163W	UBP5	P39944	805 aa		4.65	□□□□□ -1.67
YDL163W	YDL163W	VAC8	P39968	578 aa		4.65	□□□□□ -1.67
YDL163W	YDL163W	MOT2	P34909	587 aa	Known RBP	4.64	□□□□□ -1.67
YDL163W	YDL163W	MRP8	P35719	219 aa		4.64	□□□□□ -1.67
YDL163W	YDL163W	MXR1	P40029	184 aa		4.64	□□□□□ -1.67
YDL163W	YDL163W	PBP1	P53297	722 aa	Known RBP	4.64	□□□□□ -1.67
YDL163W	YDL163W	SRP1	Q02821	542 aa	Known RBP	4.64	□□□□□ -1.67
YDL163W	YDL163W	WRS1	Q12109	432 aa	Known RBP	4.64	□□□□□ -1.67
YDL163W	YDL163W	YLL058W	Q12198	575 aa		4.64	□□□□□ -1.67
YDL163W	YDL163W	SLA2	P33338	968 aa		4.63	□□□□□ -1.67
YDL163W	YDL163W	ALD6	P54115	500 aa	Known RBP	4.63	□□□□□ -1.67
YDL163W	YDL163W	SGD1	Q06132	899 aa		4.63	□□□□□ -1.67
YDL163W	YDL163W	SOD2	P00447	233 aa		4.62	□□□□□ -1.67
YDL163W	YDL163W	RPP2A	P05319	106 aa	Known RBP	4.62	□□□□□ -1.67
YDL163W	YDL163W	ACE2	P21192	770 aa		4.62	□□□□□ -1.67
YDL163W	YDL163W	DBP2	P24783	546 aa	Known RBP	4.62	□□□□□ -1.67
YDL163W	YDL163W	APL1	P27351	700 aa		4.62	□□□□□ -1.67
YDL163W	YDL163W	ABD1	P32783	436 aa	Predicted RBP	4.62	□□□□□ -1.67
YDL163W	YDL163W	TSA1	P34760	196 aa	Known RBP	4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms