RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeast

Gene RRP42, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP42	YDL111C	AIM3	P38266	947 aa	Known RBP	4.65	□□□□□ -1.67
RRP42	YDL111C	PEX28	P38848	579 aa		4.65	□□□□□ -1.67
RRP42	YDL111C	NMD3	P38861	518 aa	Known RBP	4.65	□□□□□ -1.67
RRP42	YDL111C	YPL109C	Q02981	657 aa		4.65	□□□□□ -1.67
RRP42	YDL111C	MDL2	P33311	773 aa		4.64	□□□□□ -1.67
RRP42	YDL111C	RRP14	P36080	434 aa	Known RBP	4.64	□□□□□ -1.67
RRP42	YDL111C	YHL012W	P38709	493 aa		4.64	□□□□□ -1.67
RRP42	YDL111C	FPR3	P38911	411 aa	Known RBP	4.64	□□□□□ -1.67
RRP42	YDL111C	RSM26	P47141	266 aa		4.64	□□□□□ -1.67
RRP42	YDL111C	ADI1	Q03677	179 aa		4.64	□□□□□ -1.67
RRP42	YDL111C	RKM2	Q03942	479 aa		4.64	□□□□□ -1.67
RRP42	YDL111C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
RRP42	YDL111C	HEM13	P11353	328 aa	Known RBP	4.63	□□□□□ -1.67
RRP42	YDL111C	PPG1	P32838	368 aa		4.63	□□□□□ -1.67
RRP42	YDL111C	SQT1	P35184	431 aa		4.63	□□□□□ -1.67
RRP42	YDL111C	QNS1	P38795	714 aa	Known RBP	4.63	□□□□□ -1.67
RRP42	YDL111C	YGL140C	P53120	1219 aa		4.63	□□□□□ -1.67
RRP42	YDL111C	HRK1	Q08732	759 aa	Known RBP	4.63	□□□□□ -1.67
RRP42	YDL111C	YOR131C	Q12486	218 aa		4.63	□□□□□ -1.67
RRP42	YDL111C	SOD2	P00447	233 aa		4.62	□□□□□ -1.67
RRP42	YDL111C	CIT2	P08679	460 aa		4.62	□□□□□ -1.67
RRP42	YDL111C	SRO9	P25567	434 aa	Known RBP	4.62	□□□□□ -1.67
RRP42	YDL111C	ADD66	P36040	267 aa		4.62	□□□□□ -1.67
RRP42	YDL111C	ATG14	P38270	344 aa		4.62	□□□□□ -1.67
RRP42	YDL111C	ETP1	P38748	585 aa	Known RBP	4.62	□□□□□ -1.67
RRP42	YDL111C	YGR053C	P53234	283 aa		4.62	□□□□□ -1.67
RRP42	YDL111C	YNR063W	P53749	607 aa		4.62	□□□□□ -1.67
RRP42	YDL111C	GDE1	Q02979	1223 aa		4.62	□□□□□ -1.67
RRP42	YDL111C	BDF2	Q07442	638 aa		4.62	□□□□□ -1.67
RRP42	YDL111C	RTT10	Q08924	1013 aa		4.62	□□□□□ -1.67
RRP42	YDL111C	CDC53	Q12018	815 aa	Known RBP	4.62	□□□□□ -1.67
RRP42	YDL111C	BUD6	P41697	788 aa		4.61	□□□□□ -1.67
RRP42	YDL111C	YJL045W	P47052	634 aa		4.61	□□□□□ -1.67
RRP42	YDL111C	FAA4	P47912	694 aa	Known RBP	4.61	□□□□□ -1.67
RRP42	YDL111C	FOL2	P51601	243 aa	Known RBP	4.61	□□□□□ -1.67
RRP42	YDL111C	TAF13	P11747	167 aa		4.6	□□□□□ -1.67
RRP42	YDL111C	GRX1	P25373	110 aa	Known RBP	4.6	□□□□□ -1.67
RRP42	YDL111C	DUT1	P33317	147 aa		4.6	□□□□□ -1.67
RRP42	YDL111C	TAT2	P38967	592 aa		4.6	□□□□□ -1.67
RRP42	YDL111C	KRI1	P42846	591 aa	Known RBP	4.6	□□□□□ -1.67
RRP42	YDL111C	VPS53	P47061	822 aa		4.6	□□□□□ -1.67
RRP42	YDL111C	ALG12	P53730	551 aa		4.6	□□□□□ -1.67
RRP42	YDL111C	SNO2	P53823	222 aa		4.6	□□□□□ -1.67
RRP42	YDL111C	NAN1	Q02931	896 aa	Known RBP	4.6	□□□□□ -1.67
RRP42	YDL111C	GIS1	Q03833	894 aa		4.6	□□□□□ -1.67
RRP42	YDL111C	YPL277C	Q08989	487 aa		4.6	□□□□□ -1.67
RRP42	YDL111C	TMA46	Q12000	345 aa	Known RBP	4.6	□□□□□ -1.67
RRP42	YDL111C	SEC23	P15303	768 aa	Known RBP	4.59	□□□□□ -1.67
RRP42	YDL111C	YSC84	P32793	468 aa		4.59	□□□□□ -1.67
RRP42	YDL111C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RRP42	YDL111C	SPF1	P39986	1215 aa	Known RBP	4.59	□□□□□ -1.67
RRP42	YDL111C	PIC2	P40035	300 aa		4.59	□□□□□ -1.67
RRP42	YDL111C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RRP42	YDL111C	RSC58	Q07979	502 aa		4.59	□□□□□ -1.67
RRP42	YDL111C	OPI10	Q08202	246 aa		4.59	□□□□□ -1.67
RRP42	YDL111C	RPS13	P05756	151 aa	Known RBP	4.58	□□□□□ -1.68
RRP42	YDL111C	AFG2	P32794	780 aa		4.58	□□□□□ -1.68
RRP42	YDL111C	TOD6	P34219	525 aa		4.58	□□□□□ -1.68
RRP42	YDL111C	EST2	Q06163	884 aa		4.58	□□□□□ -1.68
RRP42	YDL111C	TDA5	Q06417	326 aa	Known RBP	4.58	□□□□□ -1.68
RRP42	YDL111C	GCR1	P07261	785 aa		4.57	□□□□□ -1.68
RRP42	YDL111C	RAD27	P26793	382 aa		4.57	□□□□□ -1.68
RRP42	YDL111C	AIM26	P32858	118 aa		4.57	□□□□□ -1.68
RRP42	YDL111C	ENT3	P47160	408 aa		4.57	□□□□□ -1.68
RRP42	YDL111C	HUL5	P53119	910 aa		4.57	□□□□□ -1.68
RRP42	YDL111C	RAD4	P14736	754 aa		4.56	□□□□□ -1.68
RRP42	YDL111C	KIP1	P28742	1111 aa		4.56	□□□□□ -1.68
RRP42	YDL111C	CHZ1	P40019	153 aa	Predicted RBP	4.56	□□□□□ -1.68
RRP42	YDL111C	ENV11	P53246	860 aa		4.56	□□□□□ -1.68
RRP42	YDL111C	POB3	Q04636	552 aa	Known RBP	4.56	□□□□□ -1.68
RRP42	YDL111C	GSF2	Q04697	403 aa	Known RBP	4.56	□□□□□ -1.68
RRP42	YDL111C	RCL1	Q08096	367 aa	Predicted RBP	4.56	□□□□□ -1.68
RRP42	YDL111C	FAL1	Q12099	399 aa	Known RBP	4.56	□□□□□ -1.68
RRP42	YDL111C	SPS1	P08458	490 aa		4.55	□□□□□ -1.68
RRP42	YDL111C	PRI2	P20457	528 aa		4.55	□□□□□ -1.68
RRP42	YDL111C	BAP2	P38084	609 aa		4.55	□□□□□ -1.68
RRP42	YDL111C	GNP1	P48813	663 aa		4.55	□□□□□ -1.68
RRP42	YDL111C	CLU1	Q03690	1277 aa	Known RBP	4.55	□□□□□ -1.68
RRP42	YDL111C	UTP14	Q04500	899 aa	Known RBP	4.55	□□□□□ -1.68
RRP42	YDL111C	MRL1	Q06815	381 aa		4.55	□□□□□ -1.68
RRP42	YDL111C	NBA1	Q08229	501 aa	Known RBP	4.55	□□□□□ -1.68
RRP42	YDL111C	PPM2	Q08282	695 aa		4.55	□□□□□ -1.68
RRP42	YDL111C	COQ4	O13525	335 aa		4.54	□□□□□ -1.68
RRP42	YDL111C	YLR358C	O13565	187 aa		4.54	□□□□□ -1.68
RRP42	YDL111C	MET6	P05694	767 aa	Known RBP	4.54	□□□□□ -1.68
RRP42	YDL111C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
RRP42	YDL111C	TIM54	P47045	478 aa		4.54	□□□□□ -1.68
RRP42	YDL111C	YGL081W	P53156	320 aa		4.54	□□□□□ -1.68
RRP42	YDL111C	TYW3	P53177	273 aa		4.54	□□□□□ -1.68
RRP42	YDL111C	EEB1	Q02891	456 aa		4.54	□□□□□ -1.68
RRP42	YDL111C	HOS3	Q02959	697 aa	Known RBP	4.54	□□□□□ -1.68
RRP42	YDL111C	PTC5	Q12511	572 aa		4.54	□□□□□ -1.68
RRP42	YDL111C	AGP1	P25376	633 aa		4.53	□□□□□ -1.68
RRP42	YDL111C	YKL069W	P36088	180 aa		4.53	□□□□□ -1.68
RRP42	YDL111C	NUP82	P40368	713 aa		4.53	□□□□□ -1.68
RRP42	YDL111C	TNA1	P53322	534 aa		4.53	□□□□□ -1.68
RRP42	YDL111C	SIW14	P53965	281 aa		4.53	□□□□□ -1.68
RRP42	YDL111C	SHE9	Q04172	456 aa		4.53	□□□□□ -1.68
RRP42	YDL111C	SPO20	Q04359	397 aa		4.53	□□□□□ -1.68
RRP42	YDL111C	SPO75	Q07798	868 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms