RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL020W	YCL020W	DBP5	P20449	482 aa	Known RBP	5.07	□□□□□ -1.6
YCL020W	YCL020W	ABD1	P32783	436 aa	Predicted RBP	5.07	□□□□□ -1.6
YCL020W	YCL020W	YHL012W	P38709	493 aa		5.07	□□□□□ -1.6
YCL020W	YCL020W	CNN1	P43618	361 aa		5.07	□□□□□ -1.6
YCL020W	YCL020W	BRE4	Q07660	1125 aa		5.07	□□□□□ -1.6
YCL020W	YCL020W	HRK1	Q08732	759 aa	Known RBP	5.07	□□□□□ -1.6
YCL020W	YCL020W	BAS1	P22035	811 aa		5.06	□□□□□ -1.6
YCL020W	YCL020W	LYP1	P32487	611 aa		5.06	□□□□□ -1.6
YCL020W	YCL020W	MPH1	P40562	993 aa		5.06	□□□□□ -1.6
YCL020W	YCL020W	TYW3	P53177	273 aa		5.06	□□□□□ -1.6
YCL020W	YCL020W	CLN2	P20438	545 aa		5.05	□□□□□ -1.6
YCL020W	YCL020W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
YCL020W	YCL020W	YSC84	P32793	468 aa		5.05	□□□□□ -1.6
YCL020W	YCL020W	YGR053C	P53234	283 aa		5.05	□□□□□ -1.6
YCL020W	YCL020W	TMA46	Q12000	345 aa	Known RBP	5.05	□□□□□ -1.6
YCL020W	YCL020W	MXR1	P40029	184 aa		5.04	□□□□□ -1.6
YCL020W	YCL020W	YGL176C	P46945	554 aa		5.04	□□□□□ -1.6
YCL020W	YCL020W	SVF1	Q05515	481 aa		5.04	□□□□□ -1.6
YCL020W	YCL020W	YOR059C	Q08448	450 aa	Known RBP	5.04	□□□□□ -1.6
YCL020W	YCL020W	FAL1	Q12099	399 aa	Known RBP	5.04	□□□□□ -1.6
YCL020W	YCL020W	DBP2	P24783	546 aa	Known RBP	5.03	□□□□□ -1.6
YCL020W	YCL020W	AIM26	P32858	118 aa		5.03	□□□□□ -1.6
YCL020W	YCL020W	RGD1	P38339	666 aa		5.03	□□□□□ -1.6
YCL020W	YCL020W	HSP78	P33416	811 aa		5.02	□□□□□ -1.61
YCL020W	YCL020W	LRG1	P35688	1017 aa		5.02	□□□□□ -1.61
YCL020W	YCL020W	ENT3	P47160	408 aa		5.02	□□□□□ -1.61
YCL020W	YCL020W	NOP7	P53261	605 aa	Known RBP	5.02	□□□□□ -1.61
YCL020W	YCL020W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
YCL020W	YCL020W	OPI10	Q08202	246 aa		5.02	□□□□□ -1.61
YCL020W	YCL020W	YPL260W	Q08977	551 aa		5.02	□□□□□ -1.61
YCL020W	YCL020W	LPX1	Q12405	387 aa	Known RBP	5.02	□□□□□ -1.61
YCL020W	YCL020W	NSI1	Q12457	570 aa		5.02	□□□□□ -1.61
YCL020W	YCL020W	SNF5	P18480	905 aa		5.01	□□□□□ -1.61
YCL020W	YCL020W	ADP1	P25371	1049 aa		5.01	□□□□□ -1.61
YCL020W	YCL020W	HOS3	Q02959	697 aa	Known RBP	5.01	□□□□□ -1.61
YCL020W	YCL020W	POL12	P38121	705 aa	Predicted RBP	5	□□□□□ -1.61
YCL020W	YCL020W	MBP1	P39678	833 aa		5	□□□□□ -1.61
YCL020W	YCL020W	SIP5	P40210	489 aa	Known RBP	5	□□□□□ -1.61
YCL020W	YCL020W	HNT2	P49775	206 aa		5	□□□□□ -1.61
YCL020W	YCL020W	COQ4	O13525	335 aa		4.99	□□□□□ -1.61
YCL020W	YCL020W	RPL11A	P0C0W9	174 aa	Known RBP	4.99	□□□□□ -1.61
YCL020W	YCL020W	YKL107W	P34251	309 aa		4.99	□□□□□ -1.61
YCL020W	YCL020W	TNA1	P53322	534 aa		4.99	□□□□□ -1.61
YCL020W	YCL020W	SPO20	Q04359	397 aa		4.99	□□□□□ -1.61
YCL020W	YCL020W	RSC58	Q07979	502 aa		4.99	□□□□□ -1.61
YCL020W	YCL020W	RPL11B	Q3E757	174 aa	Predicted RBP	4.99	□□□□□ -1.61
YCL020W	YCL020W	MDL2	P33311	773 aa		4.98	□□□□□ -1.61
YCL020W	YCL020W	ETP1	P38748	585 aa	Known RBP	4.98	□□□□□ -1.61
YCL020W	YCL020W	ABZ1	P37254	787 aa	Predicted RBP	4.97	□□□□□ -1.61
YCL020W	YCL020W	SPP382	Q06411	708 aa	Predicted RBP	4.97	□□□□□ -1.61
YCL020W	YCL020W	GNT1	Q12096	491 aa		4.97	□□□□□ -1.61
YCL020W	YCL020W	SSF2	Q12153	453 aa	Predicted RBP	4.97	□□□□□ -1.61
YCL020W	YCL020W	RKM4	Q12504	494 aa		4.97	□□□□□ -1.61
YCL020W	YCL020W	STE5	P32917	917 aa		4.97	□□□□□ -1.61
YCL020W	YCL020W	SEG2	P34250	1132 aa		4.97	□□□□□ -1.61
YCL020W	YCL020W	VBA5	P36172	582 aa		4.97	□□□□□ -1.61
YCL020W	YCL020W	BAP2	P38084	609 aa		4.97	□□□□□ -1.61
YCL020W	YCL020W	RPN3	P40016	523 aa	Known RBP	4.97	□□□□□ -1.61
YCL020W	YCL020W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
YCL020W	YCL020W	YDL177C	Q12257	170 aa		4.97	□□□□□ -1.61
YCL020W	YCL020W	DFG16	Q99234	619 aa		4.97	□□□□□ -1.61
YCL020W	YCL020W	NAP1	P25293	417 aa	Known RBP	4.96	□□□□□ -1.62
YCL020W	YCL020W	SRO9	P25567	434 aa	Known RBP	4.96	□□□□□ -1.62
YCL020W	YCL020W	UGA2	P38067	497 aa		4.96	□□□□□ -1.62
YCL020W	YCL020W	CCZ1	P38273	704 aa		4.96	□□□□□ -1.62
YCL020W	YCL020W	PNT1	P38969	423 aa		4.96	□□□□□ -1.62
YCL020W	YCL020W	SPF1	P39986	1215 aa	Known RBP	4.96	□□□□□ -1.62
YCL020W	YCL020W	TDA5	Q06417	326 aa	Known RBP	4.96	□□□□□ -1.62
YCL020W	YCL020W	RSB1	Q08417	382 aa		4.96	□□□□□ -1.62
YCL020W	YCL020W	BI4	P03879	638 aa		4.95	□□□□□ -1.62
YCL020W	YCL020W	GRX1	P25373	110 aa	Known RBP	4.95	□□□□□ -1.62
YCL020W	YCL020W	PIK1	P39104	1066 aa		4.95	□□□□□ -1.62
YCL020W	YCL020W	SPS1	P08458	490 aa		4.94	□□□□□ -1.62
YCL020W	YCL020W	AGP1	P25376	633 aa		4.94	□□□□□ -1.62
YCL020W	YCL020W	SLA2	P33338	968 aa		4.94	□□□□□ -1.62
YCL020W	YCL020W	AVT1	P47082	602 aa		4.94	□□□□□ -1.62
YCL020W	YCL020W	WRS1	Q12109	432 aa	Known RBP	4.94	□□□□□ -1.62
YCL020W	YCL020W	SBA1	P28707	216 aa	Known RBP	4.93	□□□□□ -1.62
YCL020W	YCL020W	YKL151C	P36059	337 aa		4.93	□□□□□ -1.62
YCL020W	YCL020W	YBR184W	P38299	523 aa		4.93	□□□□□ -1.62
YCL020W	YCL020W	TAT2	P38967	592 aa		4.93	□□□□□ -1.62
YCL020W	YCL020W	HRQ1	Q05549	1077 aa		4.93	□□□□□ -1.62
YCL020W	YCL020W	NBA1	Q08229	501 aa	Known RBP	4.93	□□□□□ -1.62
YCL020W	YCL020W	RIB2	Q12362	591 aa	Known RBP	4.93	□□□□□ -1.62
YCL020W	YCL020W	RNQ1	P25367	405 aa		4.92	□□□□□ -1.62
YCL020W	YCL020W	ACM1	Q08981	209 aa		4.92	□□□□□ -1.62
YCL020W	YCL020W	SVS1	Q12254	260 aa		4.92	□□□□□ -1.62
YCL020W	YCL020W	GAS1	P22146	559 aa	Known RBP	4.91	□□□□□ -1.62
YCL020W	YCL020W	XYL2	Q07993	356 aa		4.91	□□□□□ -1.62
YCL020W	YCL020W	RAD4	P14736	754 aa		4.9	□□□□□ -1.63
YCL020W	YCL020W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
YCL020W	YCL020W	ERT1	P38140	529 aa		4.9	□□□□□ -1.63
YCL020W	YCL020W	HFM1	P51979	1187 aa		4.9	□□□□□ -1.63
YCL020W	YCL020W	ORC3	P54790	616 aa		4.9	□□□□□ -1.63
YCL020W	YCL020W	CYC1	P00044	109 aa	Predicted RBP	4.89	□□□□□ -1.63
YCL020W	YCL020W	CMP2	P14747	604 aa		4.89	□□□□□ -1.63
YCL020W	YCL020W	SRM1	P21827	482 aa		4.89	□□□□□ -1.63
YCL020W	YCL020W	NPP2	P39997	493 aa		4.89	□□□□□ -1.63
YCL020W	YCL020W	SEC26	P41810	973 aa	Known RBP	4.89	□□□□□ -1.63
YCL020W	YCL020W	FOL2	P51601	243 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms