RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 NUTM2BA6NNL0 878 aaPredicted RBP22.53■■□□□ 1.2
PHGDH-232ENST00000641947 NUTM2EB1AL46 878 aaPredicted RBP22.53■■□□□ 1.2
PHGDH-232ENST00000641947 IL2RBP14784 551 aa22.53■■□□□ 1.2
PHGDH-232ENST00000641947 NUTM2AQ8IVF1 878 aaPredicted RBP22.53■■□□□ 1.2
PHGDH-232ENST00000641947 DISP2A7MBM2 1401 aa22.52■■□□□ 1.2
PHGDH-232ENST00000641947 USP35Q9P2H5 1018 aa22.52■■□□□ 1.2
PHGDH-232ENST00000641947 C5P01031 1676 aa22.51■■□□□ 1.19
PHGDH-232ENST00000641947 BTBD11A6QL63 1104 aa22.5■■□□□ 1.19
PHGDH-232ENST00000641947 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
PHGDH-232ENST00000641947 RGS12O14924 1447 aa22.5■■□□□ 1.19
PHGDH-232ENST00000641947 EIF4A1P60842 406 aaKnown RBP22.5■■□□□ 1.19
PHGDH-232ENST00000641947 SLIT2O94813 1529 aa22.49■■□□□ 1.19
PHGDH-232ENST00000641947 MVPQ14764 893 aaKnown RBP22.49■■□□□ 1.19
PHGDH-232ENST00000641947 FTSJ3Q8IY81 847 aaKnown RBP22.49■■□□□ 1.19
PHGDH-232ENST00000641947 PCDH11XQ9BZA7 1347 aa22.48■■□□□ 1.19
PHGDH-232ENST00000641947 PCDH11YQ9BZA8 1340 aa22.48■■□□□ 1.19
PHGDH-232ENST00000641947 IPO8O15397 1037 aaKnown RBP22.48■■□□□ 1.19
PHGDH-232ENST00000641947 TMEM57Q8N5G2 664 aa22.48■■□□□ 1.19
PHGDH-232ENST00000641947 JCADQ9P266 1359 aa22.48■■□□□ 1.19
PHGDH-232ENST00000641947 SLC52A2Q9HAB3 445 aa22.48■■□□□ 1.19
PHGDH-232ENST00000641947 GLI3P10071 1580 aa22.47■■□□□ 1.19
PHGDH-232ENST00000641947 ARHGAP45Q92619 1136 aa22.47■■□□□ 1.19
PHGDH-232ENST00000641947 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
PHGDH-232ENST00000641947 LRP6O75581 1613 aa22.47■■□□□ 1.19
PHGDH-232ENST00000641947 HEG1Q9ULI3 1381 aa22.46■■□□□ 1.19
PHGDH-232ENST00000641947 ABCC4O15439 1325 aa22.46■■□□□ 1.19
PHGDH-232ENST00000641947 MS4A1P11836 297 aa22.45■■□□□ 1.19
PHGDH-232ENST00000641947 PAPPAQ13219 1627 aa22.45■■□□□ 1.19
PHGDH-232ENST00000641947 NFATC2IPQ8NCF5 419 aa22.45■■□□□ 1.18
PHGDH-232ENST00000641947 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
PHGDH-232ENST00000641947 UBR2Q8IWV8 1755 aa22.44■■□□□ 1.18
PHGDH-232ENST00000641947 ITGB4P16144 1822 aa22.44■■□□□ 1.18
PHGDH-232ENST00000641947 G2E3Q7L622 706 aa22.44■■□□□ 1.18
PHGDH-232ENST00000641947 SOS1Q07889 1333 aaPredicted RBP22.44■■□□□ 1.18
PHGDH-232ENST00000641947 KDM2BQ8NHM5 1336 aa22.44■■□□□ 1.18
PHGDH-232ENST00000641947 SLC4A2P04920 1241 aa22.43■■□□□ 1.18
PHGDH-232ENST00000641947 HSP90AB1P08238 724 aaKnown RBP22.43■■□□□ 1.18
PHGDH-232ENST00000641947 SLC39A6Q13433 755 aa22.43■■□□□ 1.18
PHGDH-232ENST00000641947 NKX1-1Q15270 411 aaPredicted RBP22.43■■□□□ 1.18
PHGDH-232ENST00000641947 ITPRIPQ8IWB1 547 aa22.43■■□□□ 1.18
PHGDH-232ENST00000641947 N4BP2Q86UW6 1770 aaPredicted RBP22.42■■□□□ 1.18
PHGDH-232ENST00000641947 DDX54Q8TDD1 881 aaKnown RBP22.42■■□□□ 1.18
PHGDH-232ENST00000641947 SPATA31A1Q5TZJ5 1347 aa22.41■■□□□ 1.18
PHGDH-232ENST00000641947 PRAMEF22A3QJZ6 481 aa22.4■■□□□ 1.18
PHGDH-232ENST00000641947 CCDC30Q5VVM6 783 aa22.4■■□□□ 1.18
PHGDH-232ENST00000641947 HSPA1LP34931 641 aa22.4■■□□□ 1.18
PHGDH-232ENST00000641947 HDGFL1Q5TGJ6 251 aa22.4■■□□□ 1.18
PHGDH-232ENST00000641947 ZNF790Q6PG37 636 aa22.4■■□□□ 1.18
PHGDH-232ENST00000641947 API5Q9BZZ5 524 aaKnown RBP22.4■■□□□ 1.18
PHGDH-232ENST00000641947 PCDHB15Q9Y5E8 787 aa22.4■■□□□ 1.18
PHGDH-232ENST00000641947 HOXB7P09629 217 aa22.39■■□□□ 1.17
PHGDH-232ENST00000641947 DDX19BQ9UMR2 479 aa22.39■■□□□ 1.17
PHGDH-232ENST00000641947 BCL9LQ86UU0 1499 aa22.38■■□□□ 1.17
PHGDH-232ENST00000641947 LAMB4A4D0S4 1761 aa22.38■■□□□ 1.17
PHGDH-232ENST00000641947 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
PHGDH-232ENST00000641947 PTPRCP08575 1304 aa22.38■■□□□ 1.17
PHGDH-232ENST00000641947 STK31Q9BXU1 1019 aa22.38■■□□□ 1.17
PHGDH-232ENST00000641947 SPATA31A5Q5VU36 1347 aa22.37■■□□□ 1.17
PHGDH-232ENST00000641947 SPATA31A7Q8IWB4 1347 aa22.37■■□□□ 1.17
PHGDH-232ENST00000641947 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.37■■□□□ 1.17
PHGDH-232ENST00000641947 TNS2Q63HR2 1409 aa22.37■■□□□ 1.17
PHGDH-232ENST00000641947 IGHDP01880 384 aa22.37■■□□□ 1.17
PHGDH-232ENST00000641947 EIF2S2P20042 333 aaKnown RBP22.37■■□□□ 1.17
PHGDH-232ENST00000641947 CABP4P57796 275 aa22.37■■□□□ 1.17
PHGDH-232ENST00000641947 DOT1LQ8TEK3 1739 aa22.36■■□□□ 1.17
PHGDH-232ENST00000641947 AAMPQ13685 434 aa22.36■■□□□ 1.17
PHGDH-232ENST00000641947 C8orf37Q96NL8 207 aa22.35■■□□□ 1.17
PHGDH-232ENST00000641947 ZBTB40Q9NUA8 1239 aa22.35■■□□□ 1.17
PHGDH-232ENST00000641947 KCPQ6ZWJ8 1503 aa22.35■■□□□ 1.17
PHGDH-232ENST00000641947 ERVV-2B6SEH9 535 aa22.35■■□□□ 1.17
PHGDH-232ENST00000641947 FLIIQ13045 1269 aa22.35■■□□□ 1.17
PHGDH-232ENST00000641947 SPATA31A6Q5VVP1 1343 aa22.35■■□□□ 1.17
PHGDH-232ENST00000641947 KAT6BQ8WYB5 2073 aa22.35■■□□□ 1.17
PHGDH-232ENST00000641947 ZNF496Q96IT1 587 aaPredicted RBP22.35■■□□□ 1.17
PHGDH-232ENST00000641947 CHPF2Q9P2E5 772 aa22.35■■□□□ 1.17
PHGDH-232ENST00000641947 ZBTB7BO15156 539 aaPredicted RBP22.33■■□□□ 1.17
PHGDH-232ENST00000641947 SKAP1Q86WV1 359 aa22.33■■□□□ 1.17
PHGDH-232ENST00000641947 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.17
PHGDH-232ENST00000641947 PHAXQ9H814 394 aaKnown RBP22.33■■□□□ 1.17
PHGDH-232ENST00000641947 F6X3S4 739 aa22.33■■□□□ 1.16
PHGDH-232ENST00000641947 INTS3Q68E01 1043 aaKnown RBP22.33■■□□□ 1.16
PHGDH-232ENST00000641947 CENPQQ7L2Z9 268 aaPredicted RBP22.33■■□□□ 1.16
PHGDH-232ENST00000641947 UNC5CLQ8IV45 518 aa22.33■■□□□ 1.16
PHGDH-232ENST00000641947 THRAP3Q9Y2W1 955 aaKnown RBP22.33■■□□□ 1.16
PHGDH-232ENST00000641947 ANXA1P04083 346 aa22.32■■□□□ 1.16
PHGDH-232ENST00000641947 PROSER3Q2NL68 480 aa22.31■■□□□ 1.16
PHGDH-232ENST00000641947 NGLY1Q96IV0 654 aa22.31■■□□□ 1.16
PHGDH-232ENST00000641947 FNBP4Q8N3X1 1017 aaPredicted RBP22.3■■□□□ 1.16
PHGDH-232ENST00000641947 EXOC5O00471 708 aa22.29■■□□□ 1.16
PHGDH-232ENST00000641947 FKBP5Q13451 457 aaPredicted RBP22.29■■□□□ 1.16
PHGDH-232ENST00000641947 TTC5Q8N0Z6 440 aa22.29■■□□□ 1.16
PHGDH-232ENST00000641947 CCDC9Q9Y3X0 531 aaKnown RBP22.28■■□□□ 1.16
PHGDH-232ENST00000641947 PXDNLA1KZ92 1463 aa22.28■■□□□ 1.16
PHGDH-232ENST00000641947 BARGINQ6ZT62 677 aa22.27■■□□□ 1.16
PHGDH-232ENST00000641947 CDCA7Q9BWT1 371 aaPredicted RBP22.27■■□□□ 1.16
PHGDH-232ENST00000641947 C1orf115Q9H7X2 142 aa22.27■■□□□ 1.16
PHGDH-232ENST00000641947 PDIA6Q15084 440 aa22.27■■□□□ 1.16
PHGDH-232ENST00000641947 VPS72Q15906 364 aa22.27■■□□□ 1.16
PHGDH-232ENST00000641947 FMNL2Q96PY5 1086 aa22.27■■□□□ 1.16
PHGDH-232ENST00000641947 DBF4Q9UBU7 674 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms