RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 PTMSP20962 102 aa17.12■□□□□ 0.33
SPIN3-239ENST00000640463 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
SPIN3-239ENST00000640463 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
SPIN3-239ENST00000640463 KDRP35968 1356 aa17.12■□□□□ 0.33
SPIN3-239ENST00000640463 KIF13AQ9H1H9 1805 aa17.11■□□□□ 0.33
SPIN3-239ENST00000640463 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
SPIN3-239ENST00000640463 RILPL2Q969X0 211 aa17.11■□□□□ 0.33
SPIN3-239ENST00000640463 NUCB2P80303 420 aa17.11■□□□□ 0.33
SPIN3-239ENST00000640463 CLEC17AQ6ZS10 378 aa17.11■□□□□ 0.33
SPIN3-239ENST00000640463 GNAT3A8MTJ3 354 aa17.1■□□□□ 0.33
SPIN3-239ENST00000640463 TRIM6-TRIM34B2RNG4 842 aa17.1■□□□□ 0.33
SPIN3-239ENST00000640463 KLHL40Q2TBA0 621 aa17.1■□□□□ 0.33
SPIN3-239ENST00000640463 NOL8Q76FK4 1167 aaKnown RBP17.1■□□□□ 0.33
SPIN3-239ENST00000640463 IL17REQ8NFR9 667 aa17.1■□□□□ 0.33
SPIN3-239ENST00000640463 LRRCC1Q9C099 1032 aa17.1■□□□□ 0.33
SPIN3-239ENST00000640463 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
SPIN3-239ENST00000640463 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
SPIN3-239ENST00000640463 NEK4P51957 841 aa17.1■□□□□ 0.33
SPIN3-239ENST00000640463 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
SPIN3-239ENST00000640463 OSBPL3Q9H4L5 887 aa17.1■□□□□ 0.33
SPIN3-239ENST00000640463 CCDC30Q5VVM6 783 aa17.1■□□□□ 0.33
SPIN3-239ENST00000640463 CAVIN1Q6NZI2 390 aaKnown RBP17.1■□□□□ 0.33
SPIN3-239ENST00000640463 ZDHHC9Q9Y397 364 aa17.09■□□□□ 0.33
SPIN3-239ENST00000640463 HOXC9P31274 260 aa17.09■□□□□ 0.33
SPIN3-239ENST00000640463 CLCN1P35523 988 aa17.09■□□□□ 0.33
SPIN3-239ENST00000640463 MX1P20591 662 aa17.08■□□□□ 0.33
SPIN3-239ENST00000640463 TRIM44Q96DX7 344 aaPredicted RBP17.08■□□□□ 0.33
SPIN3-239ENST00000640463 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.33
SPIN3-239ENST00000640463 PALD1Q9ULE6 856 aa17.08■□□□□ 0.33
SPIN3-239ENST00000640463 PRPF40AO75400 957 aaKnown RBP17.08■□□□□ 0.32
SPIN3-239ENST00000640463 IL1RAPL2Q9NP60 686 aa17.08■□□□□ 0.32
SPIN3-239ENST00000640463 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
SPIN3-239ENST00000640463 UNC5CLQ8IV45 518 aa17.07■□□□□ 0.32
SPIN3-239ENST00000640463 NAP1L5Q96NT1 182 aaPredicted RBP17.07■□□□□ 0.32
SPIN3-239ENST00000640463 PHAXQ9H814 394 aaKnown RBP17.07■□□□□ 0.32
SPIN3-239ENST00000640463 SETD1BQ9UPS6 1966 aaKnown RBP17.07■□□□□ 0.32
SPIN3-239ENST00000640463 ESPNB1AK53 854 aa17.07■□□□□ 0.32
SPIN3-239ENST00000640463 ESYT1Q9BSJ8 1104 aa17.07■□□□□ 0.32
SPIN3-239ENST00000640463 SALL3Q9BXA9 1300 aa17.07■□□□□ 0.32
SPIN3-239ENST00000640463 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
SPIN3-239ENST00000640463 GNAI3P08754 354 aa17.07■□□□□ 0.32
SPIN3-239ENST00000640463 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
SPIN3-239ENST00000640463 ANO2Q9NQ90 1003 aa17.07■□□□□ 0.32
SPIN3-239ENST00000640463 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
SPIN3-239ENST00000640463 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
SPIN3-239ENST00000640463 CWC22Q9HCG8 908 aaKnown RBP17.06■□□□□ 0.32
SPIN3-239ENST00000640463 RBM27Q9P2N5 1060 aaKnown RBP17.06■□□□□ 0.32
SPIN3-239ENST00000640463 USP44Q9H0E7 712 aa17.05■□□□□ 0.32
SPIN3-239ENST00000640463 MAP4K4O95819 1239 aaPredicted RBP17.05■□□□□ 0.32
SPIN3-239ENST00000640463 EIF2S2P20042 333 aaKnown RBP17.05■□□□□ 0.32
SPIN3-239ENST00000640463 NUTM1Q86Y26 1132 aa17.05■□□□□ 0.32
SPIN3-239ENST00000640463 TMX3Q96JJ7 454 aa17.05■□□□□ 0.32
SPIN3-239ENST00000640463 TBX22Q9Y458 520 aa17.05■□□□□ 0.32
SPIN3-239ENST00000640463 RBM33Q96EV2 1170 aaKnown RBP17.05■□□□□ 0.32
SPIN3-239ENST00000640463 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
SPIN3-239ENST00000640463 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
SPIN3-239ENST00000640463 CHMLP26374 656 aa17.04■□□□□ 0.32
SPIN3-239ENST00000640463 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
SPIN3-239ENST00000640463 ZSCAN23Q3MJ62 389 aa17.04■□□□□ 0.32
SPIN3-239ENST00000640463 IBTKQ9P2D0 1353 aaPredicted RBP17.04■□□□□ 0.32
SPIN3-239ENST00000640463 KCNA6P17658 529 aa17.04■□□□□ 0.32
SPIN3-239ENST00000640463 HDGFL1Q5TGJ6 251 aa17.03■□□□□ 0.32
SPIN3-239ENST00000640463 GPT2Q8TD30 523 aa17.03■□□□□ 0.32
SPIN3-239ENST00000640463 IL25Q9H293 177 aa17.03■□□□□ 0.32
SPIN3-239ENST00000640463 HTATSF1O43719 755 aaKnown RBP17.03■□□□□ 0.32
SPIN3-239ENST00000640463 UBTFL1P0CB47 393 aaPredicted RBP17.03■□□□□ 0.32
SPIN3-239ENST00000640463 MAP3K5Q99683 1374 aa17.03■□□□□ 0.32
SPIN3-239ENST00000640463 UPF3BQ9BZI7 483 aaKnown RBP17.03■□□□□ 0.32
SPIN3-239ENST00000640463 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
SPIN3-239ENST00000640463 XRN1Q8IZH2 1706 aaKnown RBP17.02■□□□□ 0.32
SPIN3-239ENST00000640463 NSFL1CQ9UNZ2 370 aaKnown RBP17.02■□□□□ 0.32
SPIN3-239ENST00000640463 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
SPIN3-239ENST00000640463 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
SPIN3-239ENST00000640463 ANXA1P04083 346 aa17.01■□□□□ 0.31
SPIN3-239ENST00000640463 SURF6O75683 361 aaKnown RBP17.01■□□□□ 0.31
SPIN3-239ENST00000640463 PPP1R42Q7Z4L9 355 aa17.01■□□□□ 0.31
SPIN3-239ENST00000640463 LGR6Q9HBX8 967 aa17■□□□□ 0.31
SPIN3-239ENST00000640463 RBSNQ9H1K0 784 aa17■□□□□ 0.31
SPIN3-239ENST00000640463 NWD1Q149M9 1564 aa17■□□□□ 0.31
SPIN3-239ENST00000640463 TUBGCP6Q96RT7 1819 aa16.99■□□□□ 0.31
SPIN3-239ENST00000640463 KCNQ3O43525 872 aa16.99■□□□□ 0.31
SPIN3-239ENST00000640463 MCCP23508 829 aa16.99■□□□□ 0.31
SPIN3-239ENST00000640463 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
SPIN3-239ENST00000640463 ZNF445P59923 1031 aa16.99■□□□□ 0.31
SPIN3-239ENST00000640463 CCDC173Q0VFZ6 552 aa16.99■□□□□ 0.31
SPIN3-239ENST00000640463 LRRC37A3O60309 1634 aa16.99■□□□□ 0.31
SPIN3-239ENST00000640463 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
SPIN3-239ENST00000640463 STAP2Q9UGK3 403 aa16.99■□□□□ 0.31
SPIN3-239ENST00000640463 ANP32BQ92688 251 aaKnown RBP16.98■□□□□ 0.31
SPIN3-239ENST00000640463 TMEM63CQ9P1W3 806 aa16.98■□□□□ 0.31
SPIN3-239ENST00000640463 THEMISQ8N1K5 641 aaPredicted RBP16.97■□□□□ 0.31
SPIN3-239ENST00000640463 SRCIN1Q9C0H9 1055 aa16.97■□□□□ 0.31
SPIN3-239ENST00000640463 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
SPIN3-239ENST00000640463 SOS1Q07889 1333 aaPredicted RBP16.97■□□□□ 0.31
SPIN3-239ENST00000640463 SRGAP3O43295 1099 aa16.97■□□□□ 0.31
SPIN3-239ENST00000640463 NBPF6Q5VWK0 638 aa16.97■□□□□ 0.31
SPIN3-239ENST00000640463 SSH3Q8TE77 659 aa16.97■□□□□ 0.31
SPIN3-239ENST00000640463 NBPF4Q96M43 638 aa16.97■□□□□ 0.31
SPIN3-239ENST00000640463 PPP1R9BQ96SB3 815 aa16.97■□□□□ 0.31
SPIN3-239ENST00000640463 CACNA1FO60840 1977 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms