RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 LRRC37A3O60309 1634 aa13.09□□□□□ -0.31
NECAP1-216ENST00000639167 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
NECAP1-216ENST00000639167 TSHZ3Q63HK5 1081 aa13.09□□□□□ -0.31
NECAP1-216ENST00000639167 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.31
NECAP1-216ENST00000639167 ANKLE2Q86XL3 938 aa13.08□□□□□ -0.31
NECAP1-216ENST00000639167 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.32
NECAP1-216ENST00000639167 PDE1AP54750 535 aa13.08□□□□□ -0.32
NECAP1-216ENST00000639167 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.32
NECAP1-216ENST00000639167 NBPF4Q96M43 638 aa13.08□□□□□ -0.32
NECAP1-216ENST00000639167 PHAXQ9H814 394 aaKnown RBP13.08□□□□□ -0.32
NECAP1-216ENST00000639167 SETD1BQ9UPS6 1966 aaKnown RBP13.08□□□□□ -0.32
NECAP1-216ENST00000639167 PSME1Q06323 249 aa13.07□□□□□ -0.32
NECAP1-216ENST00000639167 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
NECAP1-216ENST00000639167 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
NECAP1-216ENST00000639167 CASC1Q6TDU7 716 aa13.07□□□□□ -0.32
NECAP1-216ENST00000639167 IP6K1Q92551 441 aa13.07□□□□□ -0.32
NECAP1-216ENST00000639167 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
NECAP1-216ENST00000639167 DDX11L8A8MPP1 907 aa13.07□□□□□ -0.32
NECAP1-216ENST00000639167 GNAI3P08754 354 aa13.07□□□□□ -0.32
NECAP1-216ENST00000639167 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
NECAP1-216ENST00000639167 RABEP1Q15276 862 aa13.07□□□□□ -0.32
NECAP1-216ENST00000639167 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
NECAP1-216ENST00000639167 LRRFIP2Q9Y608 721 aaKnown RBP13.07□□□□□ -0.32
NECAP1-216ENST00000639167 ATP8B2P98198 1209 aa13.06□□□□□ -0.32
NECAP1-216ENST00000639167 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
NECAP1-216ENST00000639167 LRRC59Q96AG4 307 aaKnown RBP13.06□□□□□ -0.32
NECAP1-216ENST00000639167 L1TD1Q5T7N2 865 aaKnown RBP13.05□□□□□ -0.32
NECAP1-216ENST00000639167 LRRCC1Q9C099 1032 aa13.05□□□□□ -0.32
NECAP1-216ENST00000639167 LTN1O94822 1766 aa13.05□□□□□ -0.32
NECAP1-216ENST00000639167 USP54Q70EL1 1684 aa13.05□□□□□ -0.32
NECAP1-216ENST00000639167 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
NECAP1-216ENST00000639167 SSFA2P28290 1259 aa13.05□□□□□ -0.32
NECAP1-216ENST00000639167 KCNQ3O43525 872 aa13.04□□□□□ -0.32
NECAP1-216ENST00000639167 GBP4Q96PP9 640 aa13.04□□□□□ -0.32
NECAP1-216ENST00000639167 USP44Q9H0E7 712 aa13.04□□□□□ -0.32
NECAP1-216ENST00000639167 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
NECAP1-216ENST00000639167 CHD2O14647 1828 aaKnown RBP13.04□□□□□ -0.32
NECAP1-216ENST00000639167 UBTFL1P0CB47 393 aaPredicted RBP13.04□□□□□ -0.32
NECAP1-216ENST00000639167 BABAM1Q9NWV8 329 aa13.04□□□□□ -0.32
NECAP1-216ENST00000639167 NFAT5O94916 1531 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 ERC2O15083 957 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 REC8O95072 547 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 XRCC6P12956 609 aaKnown RBP eCLIP13.03□□□□□ -0.32
NECAP1-216ENST00000639167 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 ORAI2Q96SN7 254 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 FSD2A1L4K1 749 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 ANXA1P04083 346 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 MX1P20591 662 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 EIF4A1P60842 406 aaKnown RBP13.03□□□□□ -0.32
NECAP1-216ENST00000639167 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
NECAP1-216ENST00000639167 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.32
NECAP1-216ENST00000639167 IBTKQ9P2D0 1353 aaPredicted RBP13.02□□□□□ -0.32
NECAP1-216ENST00000639167 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
NECAP1-216ENST00000639167 RILPL2Q969X0 211 aa13.02□□□□□ -0.33
NECAP1-216ENST00000639167 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.33
NECAP1-216ENST00000639167 CHPF2Q9P2E5 772 aa13.02□□□□□ -0.33
NECAP1-216ENST00000639167 SOS1Q07889 1333 aaPredicted RBP13.02□□□□□ -0.33
NECAP1-216ENST00000639167 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
NECAP1-216ENST00000639167 KCNH5Q8NCM2 988 aa13.01□□□□□ -0.33
NECAP1-216ENST00000639167 ADGRL3Q9HAR2 1447 aa13.01□□□□□ -0.33
NECAP1-216ENST00000639167 TEFQ10587 303 aa13.01□□□□□ -0.33
NECAP1-216ENST00000639167 PANK2Q9BZ23 570 aa13.01□□□□□ -0.33
NECAP1-216ENST00000639167 SRCIN1Q9C0H9 1055 aa13.01□□□□□ -0.33
NECAP1-216ENST00000639167 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
NECAP1-216ENST00000639167 BTBD11A6QL63 1104 aa13□□□□□ -0.33
NECAP1-216ENST00000639167 ST18O60284 1047 aa13□□□□□ -0.33
NECAP1-216ENST00000639167 GCP02774 474 aa13□□□□□ -0.33
NECAP1-216ENST00000639167 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
NECAP1-216ENST00000639167 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
NECAP1-216ENST00000639167 UNC5CLQ8IV45 518 aa13□□□□□ -0.33
NECAP1-216ENST00000639167 ESYT1Q9BSJ8 1104 aa13□□□□□ -0.33
NECAP1-216ENST00000639167 AK9Q5TCS8 1911 aa13□□□□□ -0.33
NECAP1-216ENST00000639167 PXDNLA1KZ92 1463 aa12.99□□□□□ -0.33
NECAP1-216ENST00000639167 CACNA1FO60840 1977 aa12.99□□□□□ -0.33
NECAP1-216ENST00000639167 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
NECAP1-216ENST00000639167 NBPF7P0C2Y1 421 aaPredicted RBP12.99□□□□□ -0.33
NECAP1-216ENST00000639167 ZGPATQ8N5A5 531 aaKnown RBP12.99□□□□□ -0.33
NECAP1-216ENST00000639167 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
NECAP1-216ENST00000639167 SURF6O75683 361 aaKnown RBP12.98□□□□□ -0.33
NECAP1-216ENST00000639167 PLEKHO1Q53GL0 409 aaPredicted RBP12.98□□□□□ -0.33
NECAP1-216ENST00000639167 AKAP4Q5JQC9 854 aa12.98□□□□□ -0.33
NECAP1-216ENST00000639167 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
NECAP1-216ENST00000639167 CHMLP26374 656 aa12.98□□□□□ -0.33
NECAP1-216ENST00000639167 PKP1Q13835 747 aa12.98□□□□□ -0.33
NECAP1-216ENST00000639167 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
NECAP1-216ENST00000639167 PXDNQ92626 1479 aa12.98□□□□□ -0.33
NECAP1-216ENST00000639167 MED1Q15648 1581 aaPredicted RBP12.97□□□□□ -0.33
NECAP1-216ENST00000639167 BAG4O95429 457 aaKnown RBP12.97□□□□□ -0.33
NECAP1-216ENST00000639167 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
NECAP1-216ENST00000639167 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
NECAP1-216ENST00000639167 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
NECAP1-216ENST00000639167 STAP2Q9UGK3 403 aa12.97□□□□□ -0.33
NECAP1-216ENST00000639167 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
NECAP1-216ENST00000639167 SRGAP3O43295 1099 aa12.97□□□□□ -0.33
NECAP1-216ENST00000639167 C1orf141Q5JVX7 400 aa12.97□□□□□ -0.33
NECAP1-216ENST00000639167 ARHGEF25Q86VW2 580 aa12.97□□□□□ -0.33
NECAP1-216ENST00000639167 ANO2Q9NQ90 1003 aa12.97□□□□□ -0.33
NECAP1-216ENST00000639167 NEK4P51957 841 aa12.96□□□□□ -0.33
NECAP1-216ENST00000639167 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms