RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 HSP90AB1P08238 724 aaKnown RBP23.97■■□□□ 1.43
PNKP-230ENST00000638016 VIRMAQ69YN4 1812 aaKnown RBP23.97■■□□□ 1.43
PNKP-230ENST00000638016 SLC4A9Q96Q91 983 aa23.97■■□□□ 1.43
PNKP-230ENST00000638016 SYT17Q9BSW7 474 aa23.97■■□□□ 1.43
PNKP-230ENST00000638016 PHF14O94880 888 aa23.96■■□□□ 1.43
PNKP-230ENST00000638016 CABP4P57796 275 aa23.96■■□□□ 1.43
PNKP-230ENST00000638016 SLC16A10Q8TF71 515 aa23.96■■□□□ 1.43
PNKP-230ENST00000638016 ATP6V1AP38606 617 aa23.95■■□□□ 1.42
PNKP-230ENST00000638016 AK7Q96M32 723 aa23.95■■□□□ 1.42
PNKP-230ENST00000638016 U2SURPO15042 1029 aaKnown RBP23.94■■□□□ 1.42
PNKP-230ENST00000638016 MTHFSDQ2M296 383 aaKnown RBP23.93■■□□□ 1.42
PNKP-230ENST00000638016 KLHL34Q8N239 644 aa23.93■■□□□ 1.42
PNKP-230ENST00000638016 RBM42Q9BTD8 480 aaKnown RBP23.93■■□□□ 1.42
PNKP-230ENST00000638016 LGR6Q9HBX8 967 aa23.93■■□□□ 1.42
PNKP-230ENST00000638016 NFATC2IPQ8NCF5 419 aa23.92■■□□□ 1.42
PNKP-230ENST00000638016 COL5A3P25940 1745 aaPredicted RBP23.91■■□□□ 1.42
PNKP-230ENST00000638016 PPP2R1AP30153 589 aa23.91■■□□□ 1.42
PNKP-230ENST00000638016 AKAP4Q5JQC9 854 aa23.91■■□□□ 1.42
PNKP-230ENST00000638016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.9■■□□□ 1.42
PNKP-230ENST00000638016 POLD1P28340 1107 aa23.9■■□□□ 1.42
PNKP-230ENST00000638016 UTRNP46939 3433 aa23.9■■□□□ 1.42
PNKP-230ENST00000638016 GNPATO15228 680 aa23.89■■□□□ 1.41
PNKP-230ENST00000638016 PTCD1O75127 700 aaKnown RBP23.88■■□□□ 1.41
PNKP-230ENST00000638016 MYH14Q7Z406 1995 aaKnown RBP23.88■■□□□ 1.41
PNKP-230ENST00000638016 ZNF831Q5JPB2 1677 aa23.88■■□□□ 1.41
PNKP-230ENST00000638016 MRC1P22897 1456 aa23.87■■□□□ 1.41
PNKP-230ENST00000638016 ADAMTS7Q9UKP4 1686 aa23.87■■□□□ 1.41
PNKP-230ENST00000638016 RNMTO43148 476 aaKnown RBP23.87■■□□□ 1.41
PNKP-230ENST00000638016 MAP3K5Q99683 1374 aa23.87■■□□□ 1.41
PNKP-230ENST00000638016 TJP1Q07157 1748 aa23.87■■□□□ 1.41
PNKP-230ENST00000638016 NLGN2Q8NFZ4 835 aa23.86■■□□□ 1.41
PNKP-230ENST00000638016 FLAD1Q8NFF5 587 aa23.85■■□□□ 1.41
PNKP-230ENST00000638016 SLC52A2Q9HAB3 445 aa23.85■■□□□ 1.41
PNKP-230ENST00000638016 SSFA2P28290 1259 aa23.84■■□□□ 1.41
PNKP-230ENST00000638016 SLC39A6Q13433 755 aa23.84■■□□□ 1.41
PNKP-230ENST00000638016 CFAP53Q96M91 514 aa23.83■■□□□ 1.41
PNKP-230ENST00000638016 PRKAR2BP31323 418 aa23.82■■□□□ 1.4
PNKP-230ENST00000638016 PHACTR3Q96KR7 559 aa23.82■■□□□ 1.4
PNKP-230ENST00000638016 RSPH6AQ9H0K4 717 aa23.82■■□□□ 1.4
PNKP-230ENST00000638016 GOLGB1Q14789 3259 aaKnown RBP23.8■■□□□ 1.4
PNKP-230ENST00000638016 C4AP0C0L4 1744 aa23.8■■□□□ 1.4
PNKP-230ENST00000638016 HMGB2P26583 209 aaKnown RBP23.8■■□□□ 1.4
PNKP-230ENST00000638016 CNTNAP4Q9C0A0 1308 aa23.8■■□□□ 1.4
PNKP-230ENST00000638016 KCPQ6ZWJ8 1503 aa23.79■■□□□ 1.4
PNKP-230ENST00000638016 DCAF8L1A6NGE4 600 aa23.79■■□□□ 1.4
PNKP-230ENST00000638016 CICQ96RK0 1608 aaPredicted RBP23.79■■□□□ 1.4
PNKP-230ENST00000638016 U2AF1L5P0DN76 240 aaPredicted RBP23.78■■□□□ 1.4
PNKP-230ENST00000638016 U2AF1Q01081 240 aaKnown RBP eCLIP23.78■■□□□ 1.4
PNKP-230ENST00000638016 IL17REQ8NFR9 667 aa23.78■■□□□ 1.4
PNKP-230ENST00000638016 RTCBQ9Y3I0 505 aaKnown RBP23.78■■□□□ 1.4
PNKP-230ENST00000638016 YY1P25490 414 aa23.77■■□□□ 1.4
PNKP-230ENST00000638016 CRKLP46109 303 aaKnown RBP23.77■■□□□ 1.4
PNKP-230ENST00000638016 DNAJC10Q8IXB1 793 aa23.77■■□□□ 1.4
PNKP-230ENST00000638016 SIPA1L3O60292 1781 aaPredicted RBP23.76■■□□□ 1.39
PNKP-230ENST00000638016 RC3H1Q5TC82 1133 aaKnown RBP23.76■■□□□ 1.39
PNKP-230ENST00000638016 PELP1Q8IZL8 1130 aaKnown RBP23.76■■□□□ 1.39
PNKP-230ENST00000638016 GAS2L2Q8NHY3 880 aa23.76■■□□□ 1.39
PNKP-230ENST00000638016 ARHGEF1Q92888 912 aaKnown RBP23.76■■□□□ 1.39
PNKP-230ENST00000638016 UBR2Q8IWV8 1755 aa23.75■■□□□ 1.39
PNKP-230ENST00000638016 TRAPPC3LQ5T215 181 aa23.75■■□□□ 1.39
PNKP-230ENST00000638016 NUDCQ9Y266 331 aa23.75■■□□□ 1.39
PNKP-230ENST00000638016 GNAT3A8MTJ3 354 aa23.74■■□□□ 1.39
PNKP-230ENST00000638016 RPS6KA4O75676 772 aa23.74■■□□□ 1.39
PNKP-230ENST00000638016 DDX10Q13206 875 aaKnown RBP23.74■■□□□ 1.39
PNKP-230ENST00000638016 INTS5Q6P9B9 1019 aaKnown RBP23.73■■□□□ 1.39
PNKP-230ENST00000638016 GPR162Q16538 588 aa23.72■■□□□ 1.39
PNKP-230ENST00000638016 SRP68Q9UHB9 627 aaKnown RBP23.71■■□□□ 1.39
PNKP-230ENST00000638016 WWC3Q9ULE0 1092 aa23.71■■□□□ 1.39
PNKP-230ENST00000638016 MMP10P09238 476 aa23.7■■□□□ 1.38
PNKP-230ENST00000638016 GYS1P13807 737 aa23.7■■□□□ 1.38
PNKP-230ENST00000638016 YBX3P16989 372 aaKnown RBP eCLIP23.7■■□□□ 1.38
PNKP-230ENST00000638016 CHD4Q14839 1912 aa23.69■■□□□ 1.38
PNKP-230ENST00000638016 CEMIPQ8WUJ3 1361 aa23.69■■□□□ 1.38
PNKP-230ENST00000638016 TEFQ10587 303 aa23.69■■□□□ 1.38
PNKP-230ENST00000638016 KCNQ3O43525 872 aa23.68■■□□□ 1.38
PNKP-230ENST00000638016 CYP19A1P11511 503 aaPredicted RBP23.68■■□□□ 1.38
PNKP-230ENST00000638016 ADRA2BP18089 450 aa23.68■■□□□ 1.38
PNKP-230ENST00000638016 RFC4P35249 363 aa23.68■■□□□ 1.38
PNKP-230ENST00000638016 FCHSD2O94868 740 aa23.67■■□□□ 1.38
PNKP-230ENST00000638016 DCTN1Q14203 1278 aa23.67■■□□□ 1.38
PNKP-230ENST00000638016 MCM10Q7L590 875 aa23.67■■□□□ 1.38
PNKP-230ENST00000638016 ZNF496Q96IT1 587 aaPredicted RBP23.67■■□□□ 1.38
PNKP-230ENST00000638016 CCDC87Q9NVE4 849 aa23.67■■□□□ 1.38
PNKP-230ENST00000638016 ZBTB1Q9Y2K1 713 aa23.67■■□□□ 1.38
PNKP-230ENST00000638016 CD2APQ9Y5K6 639 aa23.67■■□□□ 1.38
PNKP-230ENST00000638016 SOS1Q07889 1333 aaPredicted RBP23.65■■□□□ 1.38
PNKP-230ENST00000638016 ZNF790Q6PG37 636 aa23.65■■□□□ 1.38
PNKP-230ENST00000638016 TTC5Q8N0Z6 440 aa23.65■■□□□ 1.38
PNKP-230ENST00000638016 DLG5Q8TDM6 1919 aa23.65■■□□□ 1.38
PNKP-230ENST00000638016 USP42Q9H9J4 1324 aaKnown RBP23.64■■□□□ 1.38
PNKP-230ENST00000638016 KIAA1551Q9HCM1 1747 aa23.64■■□□□ 1.37
PNKP-230ENST00000638016 FKBP8Q14318 412 aa23.63■■□□□ 1.37
PNKP-230ENST00000638016 KIF13BQ9NQT8 1826 aa23.63■■□□□ 1.37
PNKP-230ENST00000638016 NLGN1Q8N2Q7 840 aa23.62■■□□□ 1.37
PNKP-230ENST00000638016 N4BP2Q86UW6 1770 aaPredicted RBP23.62■■□□□ 1.37
PNKP-230ENST00000638016 HEG1Q9ULI3 1381 aa23.62■■□□□ 1.37
PNKP-230ENST00000638016 CANXP27824 592 aaKnown RBP23.61■■□□□ 1.37
PNKP-230ENST00000638016 VSIG10Q8N0Z9 540 aa23.61■■□□□ 1.37
PNKP-230ENST00000638016 COL15A1P39059 1388 aa23.61■■□□□ 1.37
PNKP-230ENST00000638016 C10orf71Q711Q0 1435 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms