RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 PRC1O43663 620 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 NOL7Q9UMY1 257 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 TCERG1LQ5VWI1 586 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 FEZ1Q99689 392 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 LUC7LQ9NQ29 371 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 MRVI1Q9Y6F6 885 aa19.09■□□□□ 0.65
CACNA1A-238ENST00000637276 PANK2Q9BZ23 570 aa19.08■□□□□ 0.65
CACNA1A-238ENST00000637276 SLC4A2P04920 1241 aa19.08■□□□□ 0.65
CACNA1A-238ENST00000637276 PPP2R5CQ13362 524 aa19.08■□□□□ 0.65
CACNA1A-238ENST00000637276 TDRD12Q587J7 1177 aaKnown RBP19.08■□□□□ 0.65
CACNA1A-238ENST00000637276 TATP17735 454 aaPredicted RBP19.08■□□□□ 0.64
CACNA1A-238ENST00000637276 LETM1O95202 739 aaPredicted RBP19.08■□□□□ 0.64
CACNA1A-238ENST00000637276 FERP16591 822 aa19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 CFAP100Q494V2 611 aa19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 ZPR1O75312 459 aa19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 WDHD1O75717 1129 aaPredicted RBP19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 PPP1R14CQ8TAE6 165 aa19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 CCDC18Q5T9S5 1454 aa19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 LARP1BQ659C4 914 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 JAKMIP1Q96N16 626 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 LRSAM1Q6UWE0 723 aa19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 TRMT1Q9NXH9 659 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-238ENST00000637276 PPP4R4Q6NUP7 873 aa19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 UACAQ9BZF9 1416 aa19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 MXRA7P84157 204 aa19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 CCDC66A2RUB6 948 aa19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 RAB3IL1Q8TBN0 382 aa19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 LUZP1Q86V48 1076 aa19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 SYCP3Q8IZU3 236 aa19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 SYNCQ9H7C4 482 aa19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-238ENST00000637276 PRKAR2BP31323 418 aa19.05■□□□□ 0.64
CACNA1A-238ENST00000637276 CASQ1P31415 396 aa19.05■□□□□ 0.64
CACNA1A-238ENST00000637276 JARID2Q92833 1246 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-238ENST00000637276 SP4Q02446 784 aa19.05■□□□□ 0.64
CACNA1A-238ENST00000637276 CCDC63Q8NA47 563 aa19.05■□□□□ 0.64
CACNA1A-238ENST00000637276 CYP46A1Q9Y6A2 500 aa19.05■□□□□ 0.64
CACNA1A-238ENST00000637276 USHBP1Q8N6Y0 703 aa19.05■□□□□ 0.64
CACNA1A-238ENST00000637276 ZNF397Q8NF99 534 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-238ENST00000637276 ZBTB21Q9ULJ3 1066 aa19.05■□□□□ 0.64
CACNA1A-238ENST00000637276 PRKCSHP14314 528 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-238ENST00000637276 HLTFQ14527 1009 aaKnown RBP eCLIP19.04■□□□□ 0.64
CACNA1A-238ENST00000637276 HSP90AA4PQ58FG1 418 aa19.04■□□□□ 0.64
CACNA1A-238ENST00000637276 NLRP5P59047 1200 aa19.04■□□□□ 0.64
CACNA1A-238ENST00000637276 FERMT3Q86UX7 667 aa19.04■□□□□ 0.64
CACNA1A-238ENST00000637276 NOP2P46087 812 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-238ENST00000637276 SPATA32Q96LK8 384 aa19.04■□□□□ 0.64
CACNA1A-238ENST00000637276 MPRIPQ6WCQ1 1025 aa19.04■□□□□ 0.64
CACNA1A-238ENST00000637276 METTL24Q5JXM2 366 aa19.04■□□□□ 0.64
CACNA1A-238ENST00000637276 GNAI2P04899 355 aa19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 AIDAQ96BJ3 306 aa19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 ZSWIM4Q9H7M6 989 aa19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 FANCIQ9NVI1 1328 aa19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 KCNA4P22459 653 aa19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 PKNOX2Q96KN3 472 aa19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 GNL1P36915 607 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 BANK1Q8NDB2 785 aa19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 IGHMBP2P38935 993 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 BTBD11A6QL63 1104 aa19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 TWISTNBQ3B726 338 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-238ENST00000637276 SMIM23A6NLE4 172 aa19.02■□□□□ 0.64
CACNA1A-238ENST00000637276 C6orf229H3BNL8 230 aa19.02■□□□□ 0.64
CACNA1A-238ENST00000637276 MYO1BO43795 1136 aa19.02■□□□□ 0.64
CACNA1A-238ENST00000637276 CCDC148Q8NFR7 591 aa19.02■□□□□ 0.64
CACNA1A-238ENST00000637276 ZNF408Q9H9D4 720 aa19.02■□□□□ 0.64
CACNA1A-238ENST00000637276 SPA17Q15506 151 aa19.02■□□□□ 0.64
CACNA1A-238ENST00000637276 CCDC192P0DO97 292 aa19.02■□□□□ 0.63
CACNA1A-238ENST00000637276 CLSTN2Q9H4D0 955 aa19.02■□□□□ 0.63
CACNA1A-238ENST00000637276 DACH1Q9UI36 760 aa19.02■□□□□ 0.63
CACNA1A-238ENST00000637276 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 SPECC1Q5M775 1068 aa19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 HDGFL1Q5TGJ6 251 aa19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 IRX5P78411 483 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 ARHGAP29Q52LW3 1261 aa19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 NUP88Q99567 741 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 GPTP24298 496 aa19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 NDC80O14777 642 aa19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 PLEKHO1Q53GL0 409 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 RPGRQ92834 1020 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 SMARCA5O60264 1052 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 TSNARE1Q96NA8 513 aa19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 TCP11L2Q8N4U5 519 aa19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 CUL5Q93034 780 aa19.01■□□□□ 0.63
CACNA1A-238ENST00000637276 TAF12Q16514 161 aa19■□□□□ 0.63
CACNA1A-238ENST00000637276 CCP110O43303 1012 aa19■□□□□ 0.63
CACNA1A-238ENST00000637276 SPATA24Q86W54 205 aa19■□□□□ 0.63
CACNA1A-238ENST00000637276 BIN1O00499 593 aa19■□□□□ 0.63
CACNA1A-238ENST00000637276 PDRG1Q9NUG6 133 aa19■□□□□ 0.63
CACNA1A-238ENST00000637276 CASTP20810 708 aaKnown RBP19■□□□□ 0.63
CACNA1A-238ENST00000637276 CCT2P78371 535 aaKnown RBP19■□□□□ 0.63
CACNA1A-238ENST00000637276 UPF3BQ9BZI7 483 aaKnown RBP19■□□□□ 0.63
CACNA1A-238ENST00000637276 PPP1R12BO60237 982 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-238ENST00000637276 TPD52P55327 224 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-238ENST00000637276 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
CACNA1A-238ENST00000637276 MAATS1Q7Z4T9 603 aa18.99■□□□□ 0.63
CACNA1A-238ENST00000637276 SULT6B1Q6IMI4 303 aa18.99■□□□□ 0.63
CACNA1A-238ENST00000637276 ERCC5P28715 1186 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-238ENST00000637276 CETN2P41208 172 aa18.99■□□□□ 0.63
CACNA1A-238ENST00000637276 TSG101Q99816 390 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms