RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 HLTFQ14527 1009 aaKnown RBP eCLIP20.35■□□□□ 0.85
CACNA1A-225ENST00000636389 NUP88Q99567 741 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-225ENST00000636389 SYCP3Q8IZU3 236 aa20.35■□□□□ 0.85
CACNA1A-225ENST00000636389 SYNCQ9H7C4 482 aa20.35■□□□□ 0.85
CACNA1A-225ENST00000636389 KIF5CO60282 957 aa20.35■□□□□ 0.85
CACNA1A-225ENST00000636389 PROSER2Q86WR7 435 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 DZIP1Q86YF9 867 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 TDRD12Q587J7 1177 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 NOB1Q9ULX3 412 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 SREK1Q8WXA9 508 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 MMRN2Q9H8L6 949 aa20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 PDRG1Q9NUG6 133 aa20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 FGFR1OPO95684 399 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 EHMT1Q9H9B1 1298 aa20.34■□□□□ 0.85
CACNA1A-225ENST00000636389 JAKMIP1Q96N16 626 aaKnown RBP20.33■□□□□ 0.85
CACNA1A-225ENST00000636389 ODF2LQ9ULJ1 636 aa20.33■□□□□ 0.85
CACNA1A-225ENST00000636389 CCDC160A6NGH7 325 aa20.33■□□□□ 0.85
CACNA1A-225ENST00000636389 NUP62CLQ9H1M0 184 aa20.33■□□□□ 0.85
CACNA1A-225ENST00000636389 BTBD11A6QL63 1104 aa20.33■□□□□ 0.84
CACNA1A-225ENST00000636389 UBXN4Q92575 508 aa20.33■□□□□ 0.84
CACNA1A-225ENST00000636389 PAIP2Q9BPZ3 127 aaKnown RBP20.33■□□□□ 0.84
CACNA1A-225ENST00000636389 CAVIN4Q5BKX8 364 aa20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 BICD1Q96G01 975 aa20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 CTNNA3Q9UI47 895 aa20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 VPS8Q8N3P4 1428 aa20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 CFAP58Q5T655 872 aa20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 PRKCSHP14314 528 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 GPATCH11Q8N954 259 aa20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 FAM69CQ0P6D2 419 aa20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 LRRC45Q96CN5 670 aa20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 A0A1W2PRG0 241 aa20.32■□□□□ 0.84
CACNA1A-225ENST00000636389 C6orf163Q5TEZ5 329 aa20.31■□□□□ 0.84
CACNA1A-225ENST00000636389 DAAM2Q86T65 1068 aa20.31■□□□□ 0.84
CACNA1A-225ENST00000636389 RRBP1Q9P2E9 1410 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-225ENST00000636389 TMEM266Q2M3C6 531 aa20.31■□□□□ 0.84
CACNA1A-225ENST00000636389 SLU7O95391 586 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-225ENST00000636389 ECM2O94769 699 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-225ENST00000636389 NOP2P46087 812 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-225ENST00000636389 MXRA7P84157 204 aa20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 PRC1O43663 620 aa20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 CASTP20810 708 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 SLC4A8Q2Y0W8 1093 aa20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 METTL24Q5JXM2 366 aa20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 CNTLNQ9NXG0 1405 aa20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 MCM3P25205 808 aa20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 CETN1Q12798 172 aa20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 NDC80O14777 642 aa20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 ZNF444Q8N0Y2 327 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-225ENST00000636389 TCERG1LQ5VWI1 586 aa20.29■□□□□ 0.84
CACNA1A-225ENST00000636389 CCDC82Q8N4S0 544 aa20.29■□□□□ 0.84
CACNA1A-225ENST00000636389 RAB34Q9BZG1 259 aa20.29■□□□□ 0.84
CACNA1A-225ENST00000636389 IPO4Q8TEX9 1081 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-225ENST00000636389 ZNF652Q9Y2D9 606 aa20.29■□□□□ 0.84
CACNA1A-225ENST00000636389 ACTN2P35609 894 aa20.29■□□□□ 0.84
CACNA1A-225ENST00000636389 RPGRQ92834 1020 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-225ENST00000636389 GBP3Q9H0R5 595 aa20.29■□□□□ 0.84
CACNA1A-225ENST00000636389 KIF4BQ2VIQ3 1234 aa20.28■□□□□ 0.84
CACNA1A-225ENST00000636389 CEP126Q9P2H0 1117 aa20.28■□□□□ 0.84
CACNA1A-225ENST00000636389 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-225ENST00000636389 MICALCLQ6ZW33 695 aa20.28■□□□□ 0.84
CACNA1A-225ENST00000636389 TMEM132EQ6IEE7 984 aa20.27■□□□□ 0.84
CACNA1A-225ENST00000636389 TERF1P54274 439 aa20.27■□□□□ 0.84
CACNA1A-225ENST00000636389 UTP14AQ9BVJ6 771 aaKnown RBP20.27■□□□□ 0.84
CACNA1A-225ENST00000636389 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
CACNA1A-225ENST00000636389 BCAR3O75815 825 aa20.27■□□□□ 0.84
CACNA1A-225ENST00000636389 PAFAH1B1P43034 410 aa20.27■□□□□ 0.84
CACNA1A-225ENST00000636389 USO1O60763 962 aaKnown RBP20.27■□□□□ 0.84
CACNA1A-225ENST00000636389 CCT4P50991 539 aaKnown RBP20.27■□□□□ 0.83
CACNA1A-225ENST00000636389 POLR3GO15318 223 aaPredicted RBP20.27■□□□□ 0.83
CACNA1A-225ENST00000636389 CKAP2LQ8IYA6 745 aa20.27■□□□□ 0.83
CACNA1A-225ENST00000636389 NLRP5P59047 1200 aa20.26■□□□□ 0.83
CACNA1A-225ENST00000636389 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
CACNA1A-225ENST00000636389 SRRTQ9BXP5 876 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-225ENST00000636389 PRKAR2BP31323 418 aa20.26■□□□□ 0.83
CACNA1A-225ENST00000636389 NAP1L3Q99457 506 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 KIF20AO95235 890 aa20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 FHOD3Q2V2M9 1422 aa20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 SRGAP3O43295 1099 aa20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 BAG4O95429 457 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 DPH6Q7L8W6 267 aa20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 MAATS1Q7Z4T9 603 aa20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 STARD3NLO95772 234 aa20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 TPD52P55327 224 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 MPHOSPH6Q99547 160 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-225ENST00000636389 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
CACNA1A-225ENST00000636389 CCDC63Q8NA47 563 aa20.24■□□□□ 0.83
CACNA1A-225ENST00000636389 MAP7D1Q3KQU3 841 aa20.24■□□□□ 0.83
CACNA1A-225ENST00000636389 C16orf71Q8IYS4 520 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-225ENST00000636389 CPLX3Q8WVH0 158 aa20.24■□□□□ 0.83
CACNA1A-225ENST00000636389 ZFP91Q96JP5 570 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-225ENST00000636389 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-225ENST00000636389 NAPBQ9H115 298 aa20.24■□□□□ 0.83
CACNA1A-225ENST00000636389 MAP3K11Q16584 847 aa20.23■□□□□ 0.83
CACNA1A-225ENST00000636389 VAT1LQ9HCJ6 419 aa20.23■□□□□ 0.83
CACNA1A-225ENST00000636389 PTPN14Q15678 1187 aa20.23■□□□□ 0.83
CACNA1A-225ENST00000636389 K7ELQ4 463 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms