RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 C4BP0C0L5 1744 aa28.66■■■□□ 2.18
RAB28-208ENST00000630951 COL23A1Q86Y22 540 aaPredicted RBP28.66■■■□□ 2.18
RAB28-208ENST00000630951 AK7Q96M32 723 aa28.66■■■□□ 2.18
RAB28-208ENST00000630951 SCN11AQ9UI33 1791 aa28.65■■■□□ 2.18
RAB28-208ENST00000630951 ITPK1Q13572 414 aa28.64■■■□□ 2.18
RAB28-208ENST00000630951 LINC00116Q8NCU8 138 aa28.64■■■□□ 2.18
RAB28-208ENST00000630951 LGR6Q9HBX8 967 aa28.64■■■□□ 2.17
RAB28-208ENST00000630951 RNMTO43148 476 aaKnown RBP28.63■■■□□ 2.17
RAB28-208ENST00000630951 SLC52A2Q9HAB3 445 aa28.63■■■□□ 2.17
RAB28-208ENST00000630951 MSH5O43196 834 aa28.62■■■□□ 2.17
RAB28-208ENST00000630951 ZEB1P37275 1124 aaPredicted RBP28.62■■■□□ 2.17
RAB28-208ENST00000630951 GAS2L2Q8NHY3 880 aa28.62■■■□□ 2.17
RAB28-208ENST00000630951 ARXQ96QS3 562 aa28.62■■■□□ 2.17
RAB28-208ENST00000630951 RBM42Q9BTD8 480 aaKnown RBP28.62■■■□□ 2.17
RAB28-208ENST00000630951 SLC4A9Q96Q91 983 aa28.61■■■□□ 2.17
RAB28-208ENST00000630951 RSPH6AQ9H0K4 717 aa28.61■■■□□ 2.17
RAB28-208ENST00000630951 ZNF831Q5JPB2 1677 aa28.61■■■□□ 2.17
RAB28-208ENST00000630951 DDX10Q13206 875 aaKnown RBP28.61■■■□□ 2.17
RAB28-208ENST00000630951 U2AF1L5P0DN76 240 aaPredicted RBP28.6■■■□□ 2.17
RAB28-208ENST00000630951 POLD1P28340 1107 aa28.6■■■□□ 2.17
RAB28-208ENST00000630951 U2AF1Q01081 240 aaKnown RBP eCLIP28.6■■■□□ 2.17
RAB28-208ENST00000630951 PRKAR2BP31323 418 aa28.59■■■□□ 2.17
RAB28-208ENST00000630951 COL24A1Q17RW2 1714 aa28.59■■■□□ 2.17
RAB28-208ENST00000630951 FCHSD2O94868 740 aa28.58■■■□□ 2.17
RAB28-208ENST00000630951 SSFA2P28290 1259 aa28.58■■■□□ 2.17
RAB28-208ENST00000630951 MRC1P22897 1456 aa28.58■■■□□ 2.17
RAB28-208ENST00000630951 ADAMTS7Q9UKP4 1686 aa28.58■■■□□ 2.17
RAB28-208ENST00000630951 FHDC1Q9C0D6 1143 aaPredicted RBP28.58■■■□□ 2.16
RAB28-208ENST00000630951 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.57■■■□□ 2.16
RAB28-208ENST00000630951 GNAT3A8MTJ3 354 aa28.57■■■□□ 2.16
RAB28-208ENST00000630951 RALBP1Q15311 655 aa28.57■■■□□ 2.16
RAB28-208ENST00000630951 AMIGO3Q86WK7 504 aa28.57■■■□□ 2.16
RAB28-208ENST00000630951 PTCD1O75127 700 aaKnown RBP28.56■■■□□ 2.16
RAB28-208ENST00000630951 PHACTR3Q96KR7 559 aa28.56■■■□□ 2.16
RAB28-208ENST00000630951 SYT17Q9BSW7 474 aa28.56■■■□□ 2.16
RAB28-208ENST00000630951 MAP3K5Q99683 1374 aa28.56■■■□□ 2.16
RAB28-208ENST00000630951 UBR3Q6ZT12 1888 aa28.56■■■□□ 2.16
RAB28-208ENST00000630951 GNPATO15228 680 aa28.55■■■□□ 2.16
RAB28-208ENST00000630951 RC3H1Q5TC82 1133 aaKnown RBP28.55■■■□□ 2.16
RAB28-208ENST00000630951 PHF14O94880 888 aa28.54■■■□□ 2.16
RAB28-208ENST00000630951 CNTNAP4Q9C0A0 1308 aa28.52■■■□□ 2.16
RAB28-208ENST00000630951 IL17REQ8NFR9 667 aa28.51■■■□□ 2.16
RAB28-208ENST00000630951 VIRMAQ69YN4 1812 aaKnown RBP28.51■■■□□ 2.15
RAB28-208ENST00000630951 RTCBQ9Y3I0 505 aaKnown RBP28.51■■■□□ 2.15
RAB28-208ENST00000630951 SMIM5Q71RC9 77 aa28.5■■■□□ 2.15
RAB28-208ENST00000630951 DCAF8L1A6NGE4 600 aa28.49■■■□□ 2.15
RAB28-208ENST00000630951 COL5A3P25940 1745 aaPredicted RBP28.49■■■□□ 2.15
RAB28-208ENST00000630951 SLC39A6Q13433 755 aa28.48■■■□□ 2.15
RAB28-208ENST00000630951 MSL1Q68DK7 614 aa28.48■■■□□ 2.15
RAB28-208ENST00000630951 ADRA2BP18089 450 aa28.48■■■□□ 2.15
RAB28-208ENST00000630951 TEFQ10587 303 aa28.48■■■□□ 2.15
RAB28-208ENST00000630951 TRAPPC3LQ5T215 181 aa28.47■■■□□ 2.15
RAB28-208ENST00000630951 CEMIPQ8WUJ3 1361 aa28.47■■■□□ 2.15
RAB28-208ENST00000630951 CICQ96RK0 1608 aaPredicted RBP28.46■■■□□ 2.15
RAB28-208ENST00000630951 RPS6KA4O75676 772 aa28.46■■■□□ 2.15
RAB28-208ENST00000630951 CRKLP46109 303 aaKnown RBP28.44■■■□□ 2.14
RAB28-208ENST00000630951 VSIG10Q8N0Z9 540 aa28.44■■■□□ 2.14
RAB28-208ENST00000630951 KCPQ6ZWJ8 1503 aa28.43■■■□□ 2.14
RAB28-208ENST00000630951 NEFMP07197 916 aa28.42■■■□□ 2.14
RAB28-208ENST00000630951 TTC5Q8N0Z6 440 aa28.42■■■□□ 2.14
RAB28-208ENST00000630951 MYBBP1AQ9BQG0 1328 aaKnown RBP28.42■■■□□ 2.14
RAB28-208ENST00000630951 TJP1Q07157 1748 aa28.42■■■□□ 2.14
RAB28-208ENST00000630951 MYH14Q7Z406 1995 aaKnown RBP28.42■■■□□ 2.14
RAB28-208ENST00000630951 HTATSF1O43719 755 aaKnown RBP28.42■■■□□ 2.14
RAB28-208ENST00000630951 DNAJC10Q8IXB1 793 aa28.42■■■□□ 2.14
RAB28-208ENST00000630951 RTF1Q92541 710 aaKnown RBP28.42■■■□□ 2.14
RAB28-208ENST00000630951 ARHGEF1Q92888 912 aaKnown RBP28.42■■■□□ 2.14
RAB28-208ENST00000630951 PNNQ9H307 717 aaKnown RBP28.42■■■□□ 2.14
RAB28-208ENST00000630951 ZNF790Q6PG37 636 aa28.41■■■□□ 2.14
RAB28-208ENST00000630951 KLHL34Q8N239 644 aa28.41■■■□□ 2.14
RAB28-208ENST00000630951 RFC4P35249 363 aa28.39■■■□□ 2.14
RAB28-208ENST00000630951 INTS5Q6P9B9 1019 aaKnown RBP28.39■■■□□ 2.14
RAB28-208ENST00000630951 PLEKHF1Q96S99 279 aa28.39■■■□□ 2.14
RAB28-208ENST00000630951 UTRNP46939 3433 aa28.38■■■□□ 2.13
RAB28-208ENST00000630951 SIPA1L3O60292 1781 aaPredicted RBP28.38■■■□□ 2.13
RAB28-208ENST00000630951 UBR2Q8IWV8 1755 aa28.38■■■□□ 2.13
RAB28-208ENST00000630951 CYP19A1P11511 503 aaPredicted RBP28.38■■■□□ 2.13
RAB28-208ENST00000630951 NLGN1Q8N2Q7 840 aa28.37■■■□□ 2.13
RAB28-208ENST00000630951 CCDC87Q9NVE4 849 aa28.37■■■□□ 2.13
RAB28-208ENST00000630951 ZNF496Q96IT1 587 aaPredicted RBP28.36■■■□□ 2.13
RAB28-208ENST00000630951 CD2APQ9Y5K6 639 aa28.36■■■□□ 2.13
RAB28-208ENST00000630951 BTBD11A6QL63 1104 aa28.35■■■□□ 2.13
RAB28-208ENST00000630951 MCM10Q7L590 875 aa28.35■■■□□ 2.13
RAB28-208ENST00000630951 PRKRIP1Q9H875 184 aaPredicted RBP28.34■■■□□ 2.13
RAB28-208ENST00000630951 STARD3NLO95772 234 aa28.33■■■□□ 2.13
RAB28-208ENST00000630951 NLGN2Q8NFZ4 835 aa28.33■■■□□ 2.13
RAB28-208ENST00000630951 TEX13AQ9BXU3 409 aaPredicted RBP28.33■■■□□ 2.13
RAB28-208ENST00000630951 HEG1Q9ULI3 1381 aa28.33■■■□□ 2.12
RAB28-208ENST00000630951 GYS1P13807 737 aa28.32■■■□□ 2.12
RAB28-208ENST00000630951 FMNL2Q96PY5 1086 aa28.32■■■□□ 2.12
RAB28-208ENST00000630951 GOLGB1Q14789 3259 aaKnown RBP28.31■■■□□ 2.12
RAB28-208ENST00000630951 SOS1Q07889 1333 aaPredicted RBP28.31■■■□□ 2.12
RAB28-208ENST00000630951 MAPK8IP3Q9UPT6 1336 aa28.31■■■□□ 2.12
RAB28-208ENST00000630951 MMP10P09238 476 aa28.31■■■□□ 2.12
RAB28-208ENST00000630951 DCTN1Q14203 1278 aa28.31■■■□□ 2.12
RAB28-208ENST00000630951 NFE2L2Q16236 605 aa28.3■■■□□ 2.12
RAB28-208ENST00000630951 USP42Q9H9J4 1324 aaKnown RBP28.3■■■□□ 2.12
RAB28-208ENST00000630951 C4AP0C0L4 1744 aa28.29■■■□□ 2.12
RAB28-208ENST00000630951 ZBTB1Q9Y2K1 713 aa28.29■■■□□ 2.12
RAB28-208ENST00000630951 KCNQ3O43525 872 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms