RNA–Protein interactions for RNA: ENST00000630763.1

SPTAN1-221, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,503 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-221ENST00000630763 FLAD1Q8NFF5 587 aa12.75□□□□□ -0.37
SPTAN1-221ENST00000630763 PDGFDQ9GZP0 370 aaPredicted RBP12.75□□□□□ -0.37
SPTAN1-221ENST00000630763 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
SPTAN1-221ENST00000630763 HNRNPUQ00839 825 aaKnown RBP eCLIP12.74□□□□□ -0.37
SPTAN1-221ENST00000630763 MTFR1LQ9H019 292 aa12.74□□□□□ -0.37
SPTAN1-221ENST00000630763 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
SPTAN1-221ENST00000630763 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
SPTAN1-221ENST00000630763 GNAT3A8MTJ3 354 aa12.73□□□□□ -0.37
SPTAN1-221ENST00000630763 PRKAR2BP31323 418 aa12.73□□□□□ -0.37
SPTAN1-221ENST00000630763 ATP6V1AP38606 617 aa12.73□□□□□ -0.37
SPTAN1-221ENST00000630763 PHACTR3Q96KR7 559 aa12.73□□□□□ -0.37
SPTAN1-221ENST00000630763 PNNQ9H307 717 aaKnown RBP12.73□□□□□ -0.37
SPTAN1-221ENST00000630763 PNPLA7Q6ZV29 1317 aa12.73□□□□□ -0.37
SPTAN1-221ENST00000630763 KCNA4P22459 653 aa12.72□□□□□ -0.37
SPTAN1-221ENST00000630763 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
SPTAN1-221ENST00000630763 LY75O60449 1722 aa12.72□□□□□ -0.37
SPTAN1-221ENST00000630763 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-221ENST00000630763 PTGER2P43116 358 aa12.72□□□□□ -0.37
SPTAN1-221ENST00000630763 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-221ENST00000630763 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-221ENST00000630763 LRP5O75197 1615 aa12.71□□□□□ -0.37
SPTAN1-221ENST00000630763 PAPPAQ13219 1627 aa12.71□□□□□ -0.37
SPTAN1-221ENST00000630763 ZBTB7AO95365 584 aa12.71□□□□□ -0.38
SPTAN1-221ENST00000630763 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.38
SPTAN1-221ENST00000630763 SGIP1Q9BQI5 828 aa12.71□□□□□ -0.38
SPTAN1-221ENST00000630763 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.38
SPTAN1-221ENST00000630763 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.38
SPTAN1-221ENST00000630763 ITPK1Q13572 414 aa12.7□□□□□ -0.38
SPTAN1-221ENST00000630763 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
SPTAN1-221ENST00000630763 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
SPTAN1-221ENST00000630763 TOGARAM1Q9Y4F4 1720 aa12.7□□□□□ -0.38
SPTAN1-221ENST00000630763 ITGB4P16144 1822 aa12.7□□□□□ -0.38
SPTAN1-221ENST00000630763 NEFMP07197 916 aa12.69□□□□□ -0.38
SPTAN1-221ENST00000630763 SSFA2P28290 1259 aa12.69□□□□□ -0.38
SPTAN1-221ENST00000630763 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
SPTAN1-221ENST00000630763 AK7Q96M32 723 aa12.69□□□□□ -0.38
SPTAN1-221ENST00000630763 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
SPTAN1-221ENST00000630763 PTCD1O75127 700 aaKnown RBP12.68□□□□□ -0.38
SPTAN1-221ENST00000630763 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
SPTAN1-221ENST00000630763 PPP1R1BQ9UD71 204 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-221ENST00000630763 TEFQ10587 303 aa12.67□□□□□ -0.38
SPTAN1-221ENST00000630763 RTF1Q92541 710 aaKnown RBP12.67□□□□□ -0.38
SPTAN1-221ENST00000630763 SRCAPQ6ZRS2 3230 aa12.67□□□□□ -0.38
SPTAN1-221ENST00000630763 CEMIPQ8WUJ3 1361 aa12.67□□□□□ -0.38
SPTAN1-221ENST00000630763 RPS6KA4O75676 772 aa12.67□□□□□ -0.38
SPTAN1-221ENST00000630763 CASZ1Q86V15 1759 aa12.67□□□□□ -0.38
SPTAN1-221ENST00000630763 CNTNAP4Q9C0A0 1308 aa12.66□□□□□ -0.38
SPTAN1-221ENST00000630763 POLD1P28340 1107 aa12.66□□□□□ -0.38
SPTAN1-221ENST00000630763 TRAPPC3LQ5T215 181 aa12.66□□□□□ -0.38
SPTAN1-221ENST00000630763 ARXQ96QS3 562 aa12.66□□□□□ -0.38
SPTAN1-221ENST00000630763 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-221ENST00000630763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
SPTAN1-221ENST00000630763 MSH5O43196 834 aa12.65□□□□□ -0.38
SPTAN1-221ENST00000630763 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
SPTAN1-221ENST00000630763 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
SPTAN1-221ENST00000630763 TEX13AQ9BXU3 409 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-221ENST00000630763 GNPATO15228 680 aa12.64□□□□□ -0.39
SPTAN1-221ENST00000630763 MRC1P22897 1456 aa12.64□□□□□ -0.39
SPTAN1-221ENST00000630763 ZNF831Q5JPB2 1677 aa12.64□□□□□ -0.39
SPTAN1-221ENST00000630763 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
SPTAN1-221ENST00000630763 ZBED9Q6R2W3 1325 aa12.64□□□□□ -0.39
SPTAN1-221ENST00000630763 SCN11AQ9UI33 1791 aa12.64□□□□□ -0.39
SPTAN1-221ENST00000630763 BTBD11A6QL63 1104 aa12.63□□□□□ -0.39
SPTAN1-221ENST00000630763 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
SPTAN1-221ENST00000630763 WDR43Q15061 677 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPTAN1-221ENST00000630763 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
SPTAN1-221ENST00000630763 NFE2L2Q16236 605 aa12.63□□□□□ -0.39
SPTAN1-221ENST00000630763 AMIGO3Q86WK7 504 aa12.63□□□□□ -0.39
SPTAN1-221ENST00000630763 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
SPTAN1-221ENST00000630763 SYT17Q9BSW7 474 aa12.63□□□□□ -0.39
SPTAN1-221ENST00000630763 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
SPTAN1-221ENST00000630763 CYP19A1P11511 503 aaPredicted RBP12.62□□□□□ -0.39
SPTAN1-221ENST00000630763 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
SPTAN1-221ENST00000630763 ARHGEF1Q92888 912 aaKnown RBP12.62□□□□□ -0.39
SPTAN1-221ENST00000630763 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
SPTAN1-221ENST00000630763 SENP3-EIF4A1A0A087X0R7 540 aa12.62□□□□□ -0.39
SPTAN1-221ENST00000630763 MCM10Q7L590 875 aa12.62□□□□□ -0.39
SPTAN1-221ENST00000630763 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
SPTAN1-221ENST00000630763 NLGN1Q8N2Q7 840 aa12.62□□□□□ -0.39
SPTAN1-221ENST00000630763 C5P01031 1676 aa12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 TAF1LQ8IZX4 1826 aa12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 PHF14O94880 888 aa12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 STARD3NLO95772 234 aa12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 ZNF496Q96IT1 587 aaPredicted RBP12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 FHDC1Q9C0D6 1143 aaPredicted RBP12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 CCDC87Q9NVE4 849 aa12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 ADAMTS8Q9UP79 889 aa12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 MAPK8IP3Q9UPT6 1336 aa12.61□□□□□ -0.39
SPTAN1-221ENST00000630763 RFC4P35249 363 aa12.6□□□□□ -0.39
SPTAN1-221ENST00000630763 DCTN1Q14203 1278 aa12.6□□□□□ -0.39
SPTAN1-221ENST00000630763 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
SPTAN1-221ENST00000630763 RIPK4P57078 832 aa12.59□□□□□ -0.39
SPTAN1-221ENST00000630763 RUNDC1Q96C34 613 aa12.59□□□□□ -0.39
SPTAN1-221ENST00000630763 HEG1Q9ULI3 1381 aa12.59□□□□□ -0.39
SPTAN1-221ENST00000630763 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
SPTAN1-221ENST00000630763 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
SPTAN1-221ENST00000630763 KCNQ3O43525 872 aa12.57□□□□□ -0.4
SPTAN1-221ENST00000630763 SNRPA1P09661 255 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms