RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 ICE2Q659A1 982 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 ATRIPQ8WXE1 791 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 MRRFQ96E11 262 aaKnown RBP4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 IQCGQ9H095 443 aaKnown RBP4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 DYNC1I1O14576 645 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 CAND2O75155 1236 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 HSP90AB1P08238 724 aaKnown RBP4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 ATP6V1AP38606 617 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 EIF4G2P78344 907 aaKnown RBP eCLIP4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 SMC5Q8IY18 1101 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 ARL10Q8N8L6 244 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 FAM184AQ8NB25 1140 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 SIRT1Q96EB6 747 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 RSPH14Q9UHP6 348 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 RICTORQ6R327 1708 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 UQCRHLA0A096LP55 91 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 UQCRHP07919 91 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 XBP1P17861 261 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 HSP90B2PQ58FF3 399 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 TRIM11Q96F44 468 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 BIN2Q9UBW5 565 aaPredicted RBP4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 HDAC9Q9UKV0 1011 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 SUFUQ9UMX1 484 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 NCOA2Q15596 1464 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 SRCAPQ6ZRS2 3230 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 UNCXA6NJT0 531 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 NAT1P18440 290 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 EVX2Q03828 476 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 EXOC6Q8TAG9 804 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 CDC5LQ99459 802 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 IKBKGQ9Y6K9 419 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 KTN1Q86UP2 1357 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 TRAK2O60296 914 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 DBN1Q16643 649 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 CCDC73Q6ZRK6 1079 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 TMX1Q9H3N1 280 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 GRPEL1Q9HAV7 217 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 GOLGA6L19H0YKK7 550 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 RBM5P52756 815 aaKnown RBP eCLIP4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 PDE3BQ13370 1112 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 PPP4R4Q6NUP7 873 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 NEUROD6Q96NK8 337 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 TSPYL2Q9H2G4 693 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 RASSF4Q9H2L5 321 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 SWAP70Q9UH65 585 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 IVNS1ABPQ9Y6Y0 642 aa4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 ZNF142P52746 1687 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-220ENST00000628915 HOXA2O43364 376 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 EIF3JO75822 258 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 JAKMIP3Q5VZ66 844 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 DNAJC14Q6Y2X3 702 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 C11orf96Q7Z7L8 435 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 ZSCAN30Q86W11 494 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 HS6ST3Q8IZP7 471 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 DCBLD2Q96PD2 775 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 RCAN3Q9UKA8 241 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 FRMPD1Q5SYB0 1578 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 DDX11L8A8MPP1 907 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 CCDC173Q0VFZ6 552 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 CENPQQ7L2Z9 268 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 TTC30AQ86WT1 665 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 FMNL3Q8IVF7 1028 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 KLHL23Q8NBE8 558 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 ANKRD20A12PQ8NF67 263 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 RSPH1Q8WYR4 309 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 MAP3K20Q9NYL2 800 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 RABL2AQ9UBK7 228 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 SYNPO2Q9UMS6 1093 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 PDZRN3Q9UPQ7 1066 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 TMA7Q9Y2S6 64 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 PCF11O94913 1555 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 GOLGB1Q14789 3259 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 PLB1Q6P1J6 1458 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 FLIIQ13045 1269 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 MLECQ14165 292 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 MCM6Q14566 821 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 UBE2Q1Q7Z7E8 422 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 WDR75Q8IWA0 830 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 GIMAP7Q8NHV1 300 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 GNL3LQ9NVN8 582 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 SERPINA10Q9UK55 444 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 CARNS1A5YM72 827 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 PARNO95453 639 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 KCNA2P16389 499 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 PEX19P40855 299 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 POU5F1Q01860 360 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 PRPF4BQ13523 1007 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 WWC2Q6AWC2 1192 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 SEPT14Q6ZU15 432 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 RPS6KC1Q96S38 1066 aa4.6□□□□□ -1.67
R3HDM1-220ENST00000628915 MCCD1P59942 119 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 FMNL2Q96PY5 1086 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 TRIM6Q9C030 488 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 RANBP17Q9H2T7 1088 aaKnown RBP4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 KIF16BQ96L93 1317 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 U2SURPO15042 1029 aaKnown RBP4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 CBFA2T2O43439 604 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 RFX1P22670 979 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 ZNF131P52739 623 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms