RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 TOP1P11387 765 aaKnown RBP10.35□□□□□ -0.75
GABRB3-216ENST00000628124 GGNBP2Q9H3C7 697 aa10.35□□□□□ -0.75
GABRB3-216ENST00000628124 CGNQ9P2M7 1197 aaKnown RBP10.35□□□□□ -0.75
GABRB3-216ENST00000628124 KIF4AO95239 1232 aa10.35□□□□□ -0.75
GABRB3-216ENST00000628124 CEP112Q8N8E3 955 aa10.35□□□□□ -0.75
GABRB3-216ENST00000628124 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
GABRB3-216ENST00000628124 BAG4O95429 457 aaKnown RBP10.35□□□□□ -0.75
GABRB3-216ENST00000628124 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
GABRB3-216ENST00000628124 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
GABRB3-216ENST00000628124 AMPD3Q01432 767 aa10.35□□□□□ -0.75
GABRB3-216ENST00000628124 FAM114A1Q8IWE2 563 aa10.35□□□□□ -0.75
GABRB3-216ENST00000628124 SLF2Q8IX21 1173 aa10.35□□□□□ -0.75
GABRB3-216ENST00000628124 MPHOSPH6Q99547 160 aaKnown RBP10.35□□□□□ -0.75
GABRB3-216ENST00000628124 AKAP2Q9Y2D5 859 aa10.35□□□□□ -0.75
GABRB3-216ENST00000628124 TDRD12Q587J7 1177 aaKnown RBP10.34□□□□□ -0.75
GABRB3-216ENST00000628124 CTCFLQ8NI51 663 aaPredicted RBP10.34□□□□□ -0.75
GABRB3-216ENST00000628124 JAKMIP1Q96N16 626 aaKnown RBP10.34□□□□□ -0.75
GABRB3-216ENST00000628124 SCAND2PQ9GZW5 306 aaPredicted RBP10.34□□□□□ -0.75
GABRB3-216ENST00000628124 BRD4O60885 1362 aaPredicted RBP10.34□□□□□ -0.75
GABRB3-216ENST00000628124 AACSQ86V21 672 aa10.34□□□□□ -0.75
GABRB3-216ENST00000628124 LRRC27Q9C0I9 530 aa10.34□□□□□ -0.75
GABRB3-216ENST00000628124 CNTLNQ9NXG0 1405 aa10.34□□□□□ -0.75
GABRB3-216ENST00000628124 HLTFQ14527 1009 aaKnown RBP eCLIP10.34□□□□□ -0.75
GABRB3-216ENST00000628124 EHBP1Q8NDI1 1231 aa10.34□□□□□ -0.75
GABRB3-216ENST00000628124 UBA5Q9GZZ9 404 aa10.34□□□□□ -0.75
GABRB3-216ENST00000628124 NSRP1Q9H0G5 558 aaKnown RBP10.34□□□□□ -0.75
GABRB3-216ENST00000628124 ANAPC4Q9UJX5 808 aa10.34□□□□□ -0.75
GABRB3-216ENST00000628124 SLC4A2P04920 1241 aa10.33□□□□□ -0.75
GABRB3-216ENST00000628124 TIGD1Q96MW7 591 aa10.33□□□□□ -0.75
GABRB3-216ENST00000628124 ZNF652Q9Y2D9 606 aa10.33□□□□□ -0.75
GABRB3-216ENST00000628124 URI1O94763 535 aaPredicted RBP10.33□□□□□ -0.76
GABRB3-216ENST00000628124 ATF7IPQ6VMQ6 1270 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC155Q8N6L0 562 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC12Q8WUD4 166 aaPredicted RBP10.33□□□□□ -0.76
GABRB3-216ENST00000628124 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 NACADO15069 1562 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 POLR3DP05423 398 aaPredicted RBP10.33□□□□□ -0.76
GABRB3-216ENST00000628124 TCP11L2Q8N4U5 519 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 MKNK2Q9HBH9 465 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 LMAN1P49257 510 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 CKAP4Q07065 602 aaKnown RBP10.33□□□□□ -0.76
GABRB3-216ENST00000628124 USP37Q86T82 979 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 IQCGQ9H095 443 aaKnown RBP10.33□□□□□ -0.76
GABRB3-216ENST00000628124 ESPNB1AK53 854 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 NOL3O60936 208 aaKnown RBP10.33□□□□□ -0.76
GABRB3-216ENST00000628124 HMGB1P09429 215 aaKnown RBP10.33□□□□□ -0.76
GABRB3-216ENST00000628124 GSDMDP57764 484 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 MRPS9P82933 396 aaKnown RBP10.33□□□□□ -0.76
GABRB3-216ENST00000628124 SEPT6Q14141 434 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 CAVIN4Q5BKX8 364 aa10.33□□□□□ -0.76
GABRB3-216ENST00000628124 GOLIM4O00461 696 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 PRKAR2BP31323 418 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 ZSCAN30Q86W11 494 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 SIL1Q9H173 461 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 NDC80O14777 642 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 KIAA1524Q8TCG1 905 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 ZNF428Q96B54 188 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 NUP88Q99567 741 aaPredicted RBP10.32□□□□□ -0.76
GABRB3-216ENST00000628124 STRN4Q9NRL3 753 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 DYNC1I1O14576 645 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 PUS7Q96PZ0 661 aaKnown RBP10.32□□□□□ -0.76
GABRB3-216ENST00000628124 RNF41Q9H4P4 317 aaPredicted RBP10.32□□□□□ -0.76
GABRB3-216ENST00000628124 A0A087WZG4 1122 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 TMCO5BA8MYB1 307 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 CTR9Q6PD62 1173 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 IQCA1Q86XH1 822 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 DZIP1Q86YF9 867 aaKnown RBP10.32□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC77Q9BR77 488 aa10.32□□□□□ -0.76
GABRB3-216ENST00000628124 ZNF692Q9BU19 519 aaPredicted RBP10.32□□□□□ -0.76
GABRB3-216ENST00000628124 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.32□□□□□ -0.76
GABRB3-216ENST00000628124 TDRD9Q8NDG6 1382 aaKnown RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 IFIT1P09914 478 aaKnown RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 EXOSC9Q06265 439 aaKnown RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 TOM1L2Q6ZVM7 507 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 IDH1O75874 414 aaKnown RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 HSPA4P34932 840 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 MTHFSP49914 203 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC6Q16204 474 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 STMN4Q9H169 189 aaPredicted RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC194A0A1B0GVG4 234 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 ZNF530Q6P9A1 599 aaPredicted RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 CALML4Q96GE6 196 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 MAP4K4O95819 1239 aaPredicted RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 PRPHP41219 470 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 KIAA0753Q2KHM9 967 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 NUTM2GQ5VZR2 741 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 RPAP2Q8IXW5 612 aaPredicted RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 SMC6Q96SB8 1091 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 TTC12Q9H892 705 aaPredicted RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 SH2B1Q9NRF2 756 aaPredicted RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 MKRN1Q9UHC7 482 aaKnown RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 PLEKHH1Q9ULM0 1364 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 PROSER2Q86WR7 435 aaPredicted RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 NAP1L3Q99457 506 aaPredicted RBP10.31□□□□□ -0.76
GABRB3-216ENST00000628124 PSMD1Q99460 953 aa10.31□□□□□ -0.76
GABRB3-216ENST00000628124 TRAF1Q13077 416 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 TTC14Q96N46 770 aa10.3□□□□□ -0.76
GABRB3-216ENST00000628124 MTIF2P46199 727 aaKnown RBP10.3□□□□□ -0.76
GABRB3-216ENST00000628124 CCDC174Q6PII3 467 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms