RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 PCDHGA10Q9Y5H3 936 aa10.85□□□□□ -0.67
TCF4-260ENST00000627685 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 WNK3Q9BYP7 1800 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 CHRNA2Q15822 529 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 LMOD2Q6P5Q4 547 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 SLC12A5Q9H2X9 1139 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 BTG4Q9NY30 223 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 ARIH1Q9Y4X5 557 aaPredicted RBP10.84□□□□□ -0.67
TCF4-260ENST00000627685 PEAK1Q9H792 1746 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 LRRC37A3O60309 1634 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 TTC21AQ8NDW8 1320 aa10.84□□□□□ -0.67
TCF4-260ENST00000627685 AATKQ6ZMQ8 1374 aa10.83□□□□□ -0.68
TCF4-260ENST00000627685 KTN1Q86UP2 1357 aaKnown RBP10.83□□□□□ -0.68
TCF4-260ENST00000627685 GCP02774 474 aa10.83□□□□□ -0.68
TCF4-260ENST00000627685 KCNV2Q8TDN2 545 aa10.83□□□□□ -0.68
TCF4-260ENST00000627685 DISP2A7MBM2 1401 aa10.83□□□□□ -0.68
TCF4-260ENST00000627685 ANKRD36BQ8N2N9 1353 aa10.82□□□□□ -0.68
TCF4-260ENST00000627685 NINLQ9Y2I6 1382 aa10.82□□□□□ -0.68
TCF4-260ENST00000627685 TNS1Q9HBL0 1735 aaKnown RBP10.82□□□□□ -0.68
TCF4-260ENST00000627685 PARP4Q9UKK3 1724 aaKnown RBP10.82□□□□□ -0.68
TCF4-260ENST00000627685 PHF14O94880 888 aa10.82□□□□□ -0.68
TCF4-260ENST00000627685 ABTB2Q8N961 1025 aa10.82□□□□□ -0.68
TCF4-260ENST00000627685 ADAM33Q9BZ11 813 aa10.82□□□□□ -0.68
TCF4-260ENST00000627685 BCL2L12Q9HB09 334 aa10.82□□□□□ -0.68
TCF4-260ENST00000627685 SPATA31A1Q5TZJ5 1347 aa10.82□□□□□ -0.68
TCF4-260ENST00000627685 PTGER2P43116 358 aa10.81□□□□□ -0.68
TCF4-260ENST00000627685 ZC3H6P61129 1189 aaKnown RBP10.81□□□□□ -0.68
TCF4-260ENST00000627685 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
TCF4-260ENST00000627685 ARHGEF25Q86VW2 580 aa10.81□□□□□ -0.68
TCF4-260ENST00000627685 NME9Q86XW9 330 aa10.81□□□□□ -0.68
TCF4-260ENST00000627685 PRDM11Q9NQV5 511 aa10.81□□□□□ -0.68
TCF4-260ENST00000627685 PTPREP23469 700 aa10.8□□□□□ -0.68
TCF4-260ENST00000627685 TYW1BQ6NUM6 668 aa10.8□□□□□ -0.68
TCF4-260ENST00000627685 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
TCF4-260ENST00000627685 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
TCF4-260ENST00000627685 ANKRD26Q9UPS8 1709 aa10.79□□□□□ -0.68
TCF4-260ENST00000627685 MMRN1Q13201 1228 aa10.79□□□□□ -0.68
TCF4-260ENST00000627685 NLRP13Q86W25 1043 aa10.79□□□□□ -0.68
TCF4-260ENST00000627685 FBXW7Q969H0 707 aa10.79□□□□□ -0.68
TCF4-260ENST00000627685 EPAS1Q99814 870 aa10.79□□□□□ -0.68
TCF4-260ENST00000627685 LTN1O94822 1766 aa10.78□□□□□ -0.68
TCF4-260ENST00000627685 RGPD5Q99666 1765 aa10.78□□□□□ -0.68
TCF4-260ENST00000627685 CRB1P82279 1406 aa10.78□□□□□ -0.68
TCF4-260ENST00000627685 GRXCR2A6NFK2 248 aa10.78□□□□□ -0.68
TCF4-260ENST00000627685 LARP1Q6PKG0 1096 aaKnown RBP10.78□□□□□ -0.68
TCF4-260ENST00000627685 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
TCF4-260ENST00000627685 CARD14Q9BXL6 1004 aa10.78□□□□□ -0.68
TCF4-260ENST00000627685 C11orf95C9JLR9 678 aaPredicted RBP10.77□□□□□ -0.69
TCF4-260ENST00000627685 NBR1Q14596 966 aa10.77□□□□□ -0.69
TCF4-260ENST00000627685 FAM98CQ17RN3 349 aaKnown RBP10.77□□□□□ -0.69
TCF4-260ENST00000627685 ADGRD1Q6QNK2 874 aa10.76□□□□□ -0.69
TCF4-260ENST00000627685 CCDC125Q86Z20 511 aa10.76□□□□□ -0.69
TCF4-260ENST00000627685 KIF20BQ96Q89 1820 aa10.76□□□□□ -0.69
TCF4-260ENST00000627685 BLMP54132 1417 aaPredicted RBP10.75□□□□□ -0.69
TCF4-260ENST00000627685 BARGINQ6ZT62 677 aa10.75□□□□□ -0.69
TCF4-260ENST00000627685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.69
TCF4-260ENST00000627685 CCER1Q8TC90 406 aaPredicted RBP10.75□□□□□ -0.69
TCF4-260ENST00000627685 WDR17Q8IZU2 1322 aa10.75□□□□□ -0.69
TCF4-260ENST00000627685 HSPA5P11021 654 aaKnown RBP10.74□□□□□ -0.69
TCF4-260ENST00000627685 FBLN1P23142 703 aa10.74□□□□□ -0.69
TCF4-260ENST00000627685 SHANK3Q9BYB0 1731 aa10.74□□□□□ -0.69
TCF4-260ENST00000627685 NCAPD2Q15021 1401 aa10.74□□□□□ -0.69
TCF4-260ENST00000627685 NSD3Q9BZ95 1437 aa10.74□□□□□ -0.69
TCF4-260ENST00000627685 TK2O00142 265 aa10.73□□□□□ -0.69
TCF4-260ENST00000627685 FYB1O15117 783 aa10.73□□□□□ -0.69
TCF4-260ENST00000627685 TMF1P82094 1093 aa10.73□□□□□ -0.69
TCF4-260ENST00000627685 VSIG10Q8N0Z9 540 aa10.73□□□□□ -0.69
TCF4-260ENST00000627685 TMC1Q8TDI8 760 aa10.73□□□□□ -0.69
TCF4-260ENST00000627685 RREB1Q92766 1687 aa10.73□□□□□ -0.69
TCF4-260ENST00000627685 RGPD1P0DJD0 1748 aa10.72□□□□□ -0.69
TCF4-260ENST00000627685 SLC24A1O60721 1099 aa10.72□□□□□ -0.69
TCF4-260ENST00000627685 C6orf132Q5T0Z8 1188 aa10.72□□□□□ -0.69
TCF4-260ENST00000627685 FAM182BQ5T319 152 aa10.72□□□□□ -0.69
TCF4-260ENST00000627685 STRN4Q9NRL3 753 aa10.72□□□□□ -0.69
TCF4-260ENST00000627685 TERF2IPQ9NYB0 399 aa10.72□□□□□ -0.69
TCF4-260ENST00000627685 BCL9O00512 1426 aa10.72□□□□□ -0.69
TCF4-260ENST00000627685 TNS2Q63HR2 1409 aa10.72□□□□□ -0.69
TCF4-260ENST00000627685 MAP3K7O43318 606 aa10.71□□□□□ -0.69
TCF4-260ENST00000627685 MAP3K19Q56UN5 1328 aa10.71□□□□□ -0.69
TCF4-260ENST00000627685 KRT27Q7Z3Y8 459 aa10.71□□□□□ -0.69
TCF4-260ENST00000627685 HDGFL2Q7Z4V5 671 aaPredicted RBP10.71□□□□□ -0.69
TCF4-260ENST00000627685 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
TCF4-260ENST00000627685 KCNH5Q8NCM2 988 aa10.71□□□□□ -0.69
TCF4-260ENST00000627685 CCDC9Q9Y3X0 531 aaKnown RBP10.71□□□□□ -0.69
TCF4-260ENST00000627685 COL9A1P20849 921 aa10.7□□□□□ -0.7
TCF4-260ENST00000627685 EN1Q05925 392 aaPredicted RBP10.7□□□□□ -0.7
TCF4-260ENST00000627685 TCP11L2Q8N4U5 519 aa10.7□□□□□ -0.7
TCF4-260ENST00000627685 VPS9D1Q9Y2B5 631 aa10.7□□□□□ -0.7
TCF4-260ENST00000627685 MEGF6O75095 1541 aa10.69□□□□□ -0.7
TCF4-260ENST00000627685 RTL1A6NKG5 1358 aa10.69□□□□□ -0.7
TCF4-260ENST00000627685 ZBED2Q9BTP6 218 aa10.69□□□□□ -0.7
TCF4-260ENST00000627685 THRAP3Q9Y2W1 955 aaKnown RBP10.69□□□□□ -0.7
TCF4-260ENST00000627685 NUP188Q5SRE5 1749 aa10.69□□□□□ -0.7
TCF4-260ENST00000627685 RGPD2P0DJD1 1756 aa10.68□□□□□ -0.7
TCF4-260ENST00000627685 PPP1R3GB7ZBB8 358 aa10.68□□□□□ -0.7
TCF4-260ENST00000627685 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.72e-7■■■■■ 31.9
TCF4-260ENST00000627685 PTF1AQ7RTS3 328 aa10.68□□□□□ -0.7
TCF4-260ENST00000627685 DEFB132Q7Z7B7 95 aa10.68□□□□□ -0.7
TCF4-260ENST00000627685 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms