RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 DLG5Q8TDM6 1919 aa25.09■■□□□ 1.61
CNOT9-209ENST00000627282 ADAMTS7Q9UKP4 1686 aa25.08■■□□□ 1.61
CNOT9-209ENST00000627282 LRP5O75197 1615 aa25.08■■□□□ 1.61
CNOT9-209ENST00000627282 RNMTO43148 476 aaKnown RBP25.08■■□□□ 1.6
CNOT9-209ENST00000627282 IL17REQ8NFR9 667 aa25.08■■□□□ 1.6
CNOT9-209ENST00000627282 SCN11AQ9UI33 1791 aa25.07■■□□□ 1.6
CNOT9-209ENST00000627282 SENP3-EIF4A1A0A087X0R7 540 aa25.06■■□□□ 1.6
CNOT9-209ENST00000627282 NEFLP07196 543 aa25.06■■□□□ 1.6
CNOT9-209ENST00000627282 RIPK4P57078 832 aa25.06■■□□□ 1.6
CNOT9-209ENST00000627282 DCTN1Q14203 1278 aa25.05■■□□□ 1.6
CNOT9-209ENST00000627282 NEUROD2Q15784 382 aa25.05■■□□□ 1.6
CNOT9-209ENST00000627282 PAPPAQ13219 1627 aa25.05■■□□□ 1.6
CNOT9-209ENST00000627282 HTATSF1O43719 755 aaKnown RBP25.04■■□□□ 1.6
CNOT9-209ENST00000627282 SLC27A3Q5K4L6 730 aa25.04■■□□□ 1.6
CNOT9-209ENST00000627282 MCM10Q7L590 875 aa25.04■■□□□ 1.6
CNOT9-209ENST00000627282 LRRC4BQ9NT99 713 aa25.04■■□□□ 1.6
CNOT9-209ENST00000627282 CEMIPQ8WUJ3 1361 aa25.04■■□□□ 1.6
CNOT9-209ENST00000627282 VIRMAQ69YN4 1812 aaKnown RBP25.04■■□□□ 1.6
CNOT9-209ENST00000627282 ERVV-2B6SEH9 535 aa25.04■■□□□ 1.6
CNOT9-209ENST00000627282 STK32BQ9NY57 414 aa25.04■■□□□ 1.6
CNOT9-209ENST00000627282 LY75O60449 1722 aa25.04■■□□□ 1.6
CNOT9-209ENST00000627282 ITGB4P16144 1822 aa25.03■■□□□ 1.6
CNOT9-209ENST00000627282 FKBP8Q14318 412 aa25.03■■□□□ 1.6
CNOT9-209ENST00000627282 RTF1Q92541 710 aaKnown RBP25.03■■□□□ 1.6
CNOT9-209ENST00000627282 TRIM35Q9UPQ4 493 aa25.02■■□□□ 1.6
CNOT9-209ENST00000627282 MRC1P22897 1456 aa25.02■■□□□ 1.6
CNOT9-209ENST00000627282 SLC15A2Q16348 729 aa25.01■■□□□ 1.59
CNOT9-209ENST00000627282 PIGBQ92521 554 aa25.01■■□□□ 1.59
CNOT9-209ENST00000627282 THUMPD2Q9BTF0 503 aaKnown RBP25.01■■□□□ 1.59
CNOT9-209ENST00000627282 SLC52A2Q9HAB3 445 aa25.01■■□□□ 1.59
CNOT9-209ENST00000627282 CABP4P57796 275 aa25■■□□□ 1.59
CNOT9-209ENST00000627282 NFATC2IPQ8NCF5 419 aa25■■□□□ 1.59
CNOT9-209ENST00000627282 TMOD3Q9NYL9 352 aa25■■□□□ 1.59
CNOT9-209ENST00000627282 CASZ1Q86V15 1759 aa24.98■■□□□ 1.59
CNOT9-209ENST00000627282 LMOD3Q0VAK6 560 aa24.98■■□□□ 1.59
CNOT9-209ENST00000627282 PALLDQ8WX93 1383 aa24.97■■□□□ 1.59
CNOT9-209ENST00000627282 KCNQ4P56696 695 aa24.97■■□□□ 1.59
CNOT9-209ENST00000627282 CCNL1Q9UK58 526 aaPredicted RBP24.97■■□□□ 1.59
CNOT9-209ENST00000627282 TEFQ10587 303 aa24.96■■□□□ 1.59
CNOT9-209ENST00000627282 ZNF827Q17R98 1081 aa24.96■■□□□ 1.59
CNOT9-209ENST00000627282 SMARCC1Q92922 1105 aaPredicted RBP24.95■■□□□ 1.58
CNOT9-209ENST00000627282 PDGFDQ9GZP0 370 aaPredicted RBP24.95■■□□□ 1.58
CNOT9-209ENST00000627282 SIPA1L3O60292 1781 aaPredicted RBP24.95■■□□□ 1.58
CNOT9-209ENST00000627282 AKT1S1Q96B36 256 aa24.94■■□□□ 1.58
CNOT9-209ENST00000627282 SALL2Q9Y467 1007 aaPredicted RBP24.94■■□□□ 1.58
CNOT9-209ENST00000627282 CCDC27Q2M243 656 aa24.94■■□□□ 1.58
CNOT9-209ENST00000627282 NCBP3Q53F19 620 aaKnown RBP24.94■■□□□ 1.58
CNOT9-209ENST00000627282 ASAP1Q9ULH1 1129 aa24.94■■□□□ 1.58
CNOT9-209ENST00000627282 SPON1Q9HCB6 807 aa24.92■■□□□ 1.58
CNOT9-209ENST00000627282 ATG3Q9NT62 314 aa24.92■■□□□ 1.58
CNOT9-209ENST00000627282 WWC1Q8IX03 1113 aa24.91■■□□□ 1.58
CNOT9-209ENST00000627282 SLC39A6Q13433 755 aa24.89■■□□□ 1.57
CNOT9-209ENST00000627282 TAF7Q15545 349 aaPredicted RBP24.89■■□□□ 1.57
CNOT9-209ENST00000627282 C5P01031 1676 aa24.88■■□□□ 1.57
CNOT9-209ENST00000627282 NGEFQ8N5V2 710 aa24.88■■□□□ 1.57
CNOT9-209ENST00000627282 QSER1Q2KHR3 1735 aa24.88■■□□□ 1.57
CNOT9-209ENST00000627282 BTBD11A6QL63 1104 aa24.87■■□□□ 1.57
CNOT9-209ENST00000627282 ZBTB7AO95365 584 aa24.87■■□□□ 1.57
CNOT9-209ENST00000627282 HMGB2P26583 209 aaKnown RBP24.87■■□□□ 1.57
CNOT9-209ENST00000627282 MIS18AQ9NYP9 233 aa24.87■■□□□ 1.57
CNOT9-209ENST00000627282 TFCP2L1Q9NZI6 479 aa24.86■■□□□ 1.57
CNOT9-209ENST00000627282 KCNQ3O43525 872 aa24.86■■□□□ 1.57
CNOT9-209ENST00000627282 ZNF521Q96K83 1311 aa24.85■■□□□ 1.57
CNOT9-209ENST00000627282 LOC102724428A0A0B4J2F2 783 aa24.85■■□□□ 1.57
CNOT9-209ENST00000627282 SIK1P57059 783 aa24.85■■□□□ 1.57
CNOT9-209ENST00000627282 ERICH6BQ5W0A0 696 aa24.85■■□□□ 1.57
CNOT9-209ENST00000627282 TAF1LQ8IZX4 1826 aa24.85■■□□□ 1.57
CNOT9-209ENST00000627282 TUBGCP6Q96RT7 1819 aa24.85■■□□□ 1.57
CNOT9-209ENST00000627282 ZNF790Q6PG37 636 aa24.84■■□□□ 1.57
CNOT9-209ENST00000627282 MTFR1LQ9H019 292 aa24.84■■□□□ 1.57
CNOT9-209ENST00000627282 PNPLA7Q6ZV29 1317 aa24.84■■□□□ 1.57
CNOT9-209ENST00000627282 KCPQ6ZWJ8 1503 aa24.83■■□□□ 1.57
CNOT9-209ENST00000627282 CHL1O00533 1208 aa24.82■■□□□ 1.56
CNOT9-209ENST00000627282 PTCD1O75127 700 aaKnown RBP24.82■■□□□ 1.56
CNOT9-209ENST00000627282 ZNF853P0CG23 659 aa24.82■■□□□ 1.56
CNOT9-209ENST00000627282 CALD1Q05682 793 aaKnown RBP24.82■■□□□ 1.56
CNOT9-209ENST00000627282 SLC4A9Q96Q91 983 aa24.82■■□□□ 1.56
CNOT9-209ENST00000627282 ATF5Q9Y2D1 282 aaPredicted RBP24.82■■□□□ 1.56
CNOT9-209ENST00000627282 RNF123Q5XPI4 1314 aa24.82■■□□□ 1.56
CNOT9-209ENST00000627282 KDM3BQ7LBC6 1761 aa24.82■■□□□ 1.56
CNOT9-209ENST00000627282 UBR2Q8IWV8 1755 aa24.82■■□□□ 1.56
CNOT9-209ENST00000627282 C4BP0C0L5 1744 aa24.81■■□□□ 1.56
CNOT9-209ENST00000627282 WDR63Q8IWG1 891 aa24.81■■□□□ 1.56
CNOT9-209ENST00000627282 CFAP44Q96MT7 982 aa24.81■■□□□ 1.56
CNOT9-209ENST00000627282 LAS1LQ9Y4W2 734 aaKnown RBP24.81■■□□□ 1.56
CNOT9-209ENST00000627282 PTGER2P43116 358 aa24.8■■□□□ 1.56
CNOT9-209ENST00000627282 TTC5Q8N0Z6 440 aa24.8■■□□□ 1.56
CNOT9-209ENST00000627282 ZNF496Q96IT1 587 aaPredicted RBP24.8■■□□□ 1.56
CNOT9-209ENST00000627282 IFT57Q9NWB7 429 aa24.8■■□□□ 1.56
CNOT9-209ENST00000627282 BABAM1Q9NWV8 329 aa24.8■■□□□ 1.56
CNOT9-209ENST00000627282 TSPYL4Q9UJ04 414 aa24.8■■□□□ 1.56
CNOT9-209ENST00000627282 RBM42Q9BTD8 480 aaKnown RBP24.79■■□□□ 1.56
CNOT9-209ENST00000627282 PPP1R1BQ9UD71 204 aaPredicted RBP24.79■■□□□ 1.56
CNOT9-209ENST00000627282 IL16Q14005 1332 aa24.79■■□□□ 1.56
CNOT9-209ENST00000627282 SLC16A10Q8TF71 515 aa24.79■■□□□ 1.56
CNOT9-209ENST00000627282 ZNF831Q5JPB2 1677 aa24.78■■□□□ 1.56
CNOT9-209ENST00000627282 ATP6V1AP38606 617 aa24.78■■□□□ 1.56
CNOT9-209ENST00000627282 ITPK1Q13572 414 aa24.78■■□□□ 1.56
CNOT9-209ENST00000627282 SPINK5Q9NQ38 1064 aaPredicted RBP24.78■■□□□ 1.56
CNOT9-209ENST00000627282 GNAI1P63096 354 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms