RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 AKAP4Q5JQC9 854 aa14.62□□□□□ -0.07
SSBP4-215ENST00000625926 NFATC2IPQ8NCF5 419 aa14.62□□□□□ -0.07
SSBP4-215ENST00000625926 MAP3K5Q99683 1374 aa14.61□□□□□ -0.07
SSBP4-215ENST00000625926 KLHL34Q8N239 644 aa14.61□□□□□ -0.07
SSBP4-215ENST00000625926 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
SSBP4-215ENST00000625926 KDM6AO15550 1401 aaPredicted RBP14.6□□□□□ -0.07
SSBP4-215ENST00000625926 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.6□□□□□ -0.07
SSBP4-215ENST00000625926 U2SURPO15042 1029 aaKnown RBP14.6□□□□□ -0.07
SSBP4-215ENST00000625926 PHF14O94880 888 aa14.6□□□□□ -0.07
SSBP4-215ENST00000625926 SSFA2P28290 1259 aa14.6□□□□□ -0.07
SSBP4-215ENST00000625926 MSL1Q68DK7 614 aa14.6□□□□□ -0.07
SSBP4-215ENST00000625926 LY75O60449 1722 aa14.59□□□□□ -0.07
SSBP4-215ENST00000625926 GNPATO15228 680 aa14.59□□□□□ -0.07
SSBP4-215ENST00000625926 AMIGO3Q86WK7 504 aa14.59□□□□□ -0.07
SSBP4-215ENST00000625926 CFAP53Q96M91 514 aa14.59□□□□□ -0.07
SSBP4-215ENST00000625926 SLC4A9Q96Q91 983 aa14.59□□□□□ -0.07
SSBP4-215ENST00000625926 MTHFSDQ2M296 383 aaKnown RBP14.58□□□□□ -0.08
SSBP4-215ENST00000625926 SMIM5Q71RC9 77 aa14.58□□□□□ -0.08
SSBP4-215ENST00000625926 LGR6Q9HBX8 967 aa14.58□□□□□ -0.08
SSBP4-215ENST00000625926 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.08
SSBP4-215ENST00000625926 PTCD1O75127 700 aaKnown RBP14.57□□□□□ -0.08
SSBP4-215ENST00000625926 RC3H1Q5TC82 1133 aaKnown RBP14.57□□□□□ -0.08
SSBP4-215ENST00000625926 RTCBQ9Y3I0 505 aaKnown RBP14.57□□□□□ -0.08
SSBP4-215ENST00000625926 RNMTO43148 476 aaKnown RBP14.56□□□□□ -0.08
SSBP4-215ENST00000625926 TRAPPC3LQ5T215 181 aa14.56□□□□□ -0.08
SSBP4-215ENST00000625926 SLC52A2Q9HAB3 445 aa14.56□□□□□ -0.08
SSBP4-215ENST00000625926 PPP2R1AP30153 589 aa14.55□□□□□ -0.08
SSBP4-215ENST00000625926 GPR162Q16538 588 aa14.55□□□□□ -0.08
SSBP4-215ENST00000625926 NUDCQ9Y266 331 aa14.55□□□□□ -0.08
SSBP4-215ENST00000625926 NLGN2Q8NFZ4 835 aa14.54□□□□□ -0.08
SSBP4-215ENST00000625926 GAS2L2Q8NHY3 880 aa14.54□□□□□ -0.08
SSBP4-215ENST00000625926 CD2APQ9Y5K6 639 aa14.54□□□□□ -0.08
SSBP4-215ENST00000625926 CNTNAP4Q9C0A0 1308 aa14.54□□□□□ -0.08
SSBP4-215ENST00000625926 KAT6BQ8WYB5 2073 aa14.54□□□□□ -0.08
SSBP4-215ENST00000625926 RPS6KA4O75676 772 aa14.53□□□□□ -0.08
SSBP4-215ENST00000625926 ADRA2BP18089 450 aa14.53□□□□□ -0.08
SSBP4-215ENST00000625926 CHD4Q14839 1912 aa14.53□□□□□ -0.08
SSBP4-215ENST00000625926 C4BP0C0L5 1744 aa14.52□□□□□ -0.08
SSBP4-215ENST00000625926 COL3A1P02461 1466 aaPredicted RBP14.52□□□□□ -0.08
SSBP4-215ENST00000625926 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.09
SSBP4-215ENST00000625926 ARHGEF1Q92888 912 aaKnown RBP14.52□□□□□ -0.09
SSBP4-215ENST00000625926 GNAT3A8MTJ3 354 aa14.51□□□□□ -0.09
SSBP4-215ENST00000625926 U2AF1L5P0DN76 240 aaPredicted RBP14.51□□□□□ -0.09
SSBP4-215ENST00000625926 RFC4P35249 363 aa14.51□□□□□ -0.09
SSBP4-215ENST00000625926 CRKLP46109 303 aaKnown RBP14.51□□□□□ -0.09
SSBP4-215ENST00000625926 U2AF1Q01081 240 aaKnown RBP eCLIP14.51□□□□□ -0.09
SSBP4-215ENST00000625926 SLC39A6Q13433 755 aa14.51□□□□□ -0.09
SSBP4-215ENST00000625926 NLGN1Q8N2Q7 840 aa14.51□□□□□ -0.09
SSBP4-215ENST00000625926 QSER1Q2KHR3 1735 aa14.51□□□□□ -0.09
SSBP4-215ENST00000625926 C5P01031 1676 aa14.51□□□□□ -0.09
SSBP4-215ENST00000625926 PRKAR2BP31323 418 aa14.5□□□□□ -0.09
SSBP4-215ENST00000625926 PHACTR3Q96KR7 559 aa14.5□□□□□ -0.09
SSBP4-215ENST00000625926 RSPH6AQ9H0K4 717 aa14.5□□□□□ -0.09
SSBP4-215ENST00000625926 FCHSD2O94868 740 aa14.49□□□□□ -0.09
SSBP4-215ENST00000625926 TEFQ10587 303 aa14.49□□□□□ -0.09
SSBP4-215ENST00000625926 DNAJC10Q8IXB1 793 aa14.49□□□□□ -0.09
SSBP4-215ENST00000625926 IL17REQ8NFR9 667 aa14.49□□□□□ -0.09
SSBP4-215ENST00000625926 ITGB4P16144 1822 aa14.49□□□□□ -0.09
SSBP4-215ENST00000625926 GRIN3BO60391 1043 aa14.48□□□□□ -0.09
SSBP4-215ENST00000625926 MMP10P09238 476 aa14.48□□□□□ -0.09
SSBP4-215ENST00000625926 INTS5Q6P9B9 1019 aaKnown RBP14.48□□□□□ -0.09
SSBP4-215ENST00000625926 TTC5Q8N0Z6 440 aa14.48□□□□□ -0.09
SSBP4-215ENST00000625926 GYS1P13807 737 aa14.47□□□□□ -0.09
SSBP4-215ENST00000625926 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
SSBP4-215ENST00000625926 CCDC87Q9NVE4 849 aa14.47□□□□□ -0.09
SSBP4-215ENST00000625926 CYP19A1P11511 503 aaPredicted RBP14.46□□□□□ -0.09
SSBP4-215ENST00000625926 MRC1P22897 1456 aa14.45□□□□□ -0.1
SSBP4-215ENST00000625926 YBX3P16989 372 aaKnown RBP eCLIP14.45□□□□□ -0.1
SSBP4-215ENST00000625926 ZNF790Q6PG37 636 aa14.45□□□□□ -0.1
SSBP4-215ENST00000625926 PARP3Q9Y6F1 533 aa14.45□□□□□ -0.1
SSBP4-215ENST00000625926 COL24A1Q17RW2 1714 aa14.44□□□□□ -0.1
SSBP4-215ENST00000625926 TUBGCP6Q96RT7 1819 aa14.44□□□□□ -0.1
SSBP4-215ENST00000625926 RTF1Q92541 710 aaKnown RBP14.44□□□□□ -0.1
SSBP4-215ENST00000625926 SRP68Q9UHB9 627 aaKnown RBP14.44□□□□□ -0.1
SSBP4-215ENST00000625926 USP42Q9H9J4 1324 aaKnown RBP14.43□□□□□ -0.1
SSBP4-215ENST00000625926 ZPR1O75312 459 aa14.43□□□□□ -0.1
SSBP4-215ENST00000625926 STARD3NLO95772 234 aa14.43□□□□□ -0.1
SSBP4-215ENST00000625926 NEFMP07197 916 aa14.43□□□□□ -0.1
SSBP4-215ENST00000625926 ZNF496Q96IT1 587 aaPredicted RBP14.43□□□□□ -0.1
SSBP4-215ENST00000625926 TEX13AQ9BXU3 409 aaPredicted RBP14.43□□□□□ -0.1
SSBP4-215ENST00000625926 SOS1Q07889 1333 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-215ENST00000625926 BTBD11A6QL63 1104 aa14.42□□□□□ -0.1
SSBP4-215ENST00000625926 HTATSF1O43719 755 aaKnown RBP14.42□□□□□ -0.1
SSBP4-215ENST00000625926 SLC34A2O95436 690 aa14.42□□□□□ -0.1
SSBP4-215ENST00000625926 TGFB2P61812 414 aa14.42□□□□□ -0.1
SSBP4-215ENST00000625926 DDX10Q13206 875 aaKnown RBP14.42□□□□□ -0.1
SSBP4-215ENST00000625926 FKBP8Q14318 412 aa14.42□□□□□ -0.1
SSBP4-215ENST00000625926 RALBP1Q15311 655 aa14.42□□□□□ -0.1
SSBP4-215ENST00000625926 ZBTB1Q9Y2K1 713 aa14.42□□□□□ -0.1
SSBP4-215ENST00000625926 TAF1LQ8IZX4 1826 aa14.42□□□□□ -0.1
SSBP4-215ENST00000625926 CEMIPQ8WUJ3 1361 aa14.42□□□□□ -0.1
SSBP4-215ENST00000625926 ZNF831Q5JPB2 1677 aa14.42□□□□□ -0.1
SSBP4-215ENST00000625926 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
SSBP4-215ENST00000625926 MCM10Q7L590 875 aa14.41□□□□□ -0.1
SSBP4-215ENST00000625926 FMNL2Q96PY5 1086 aa14.41□□□□□ -0.1
SSBP4-215ENST00000625926 HEG1Q9ULI3 1381 aa14.4□□□□□ -0.1
SSBP4-215ENST00000625926 USPL1Q5W0Q7 1092 aa14.4□□□□□ -0.1
SSBP4-215ENST00000625926 PNNQ9H307 717 aaKnown RBP14.4□□□□□ -0.1
SSBP4-215ENST00000625926 NARFQ9UHQ1 456 aa14.4□□□□□ -0.1
SSBP4-215ENST00000625926 KCPQ6ZWJ8 1503 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms