RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 NFATC2IPQ8NCF5 419 aa16.93■□□□□ 0.3
USP8-219ENST00000625664 LINC00116Q8NCU8 138 aa16.93■□□□□ 0.3
USP8-219ENST00000625664 SLC16A10Q8TF71 515 aa16.93■□□□□ 0.3
USP8-219ENST00000625664 AK7Q96M32 723 aa16.93■□□□□ 0.3
USP8-219ENST00000625664 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
USP8-219ENST00000625664 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
USP8-219ENST00000625664 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
USP8-219ENST00000625664 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
USP8-219ENST00000625664 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
USP8-219ENST00000625664 DDX10Q13206 875 aaKnown RBP16.9■□□□□ 0.3
USP8-219ENST00000625664 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
USP8-219ENST00000625664 NUDCQ9Y266 331 aa16.9■□□□□ 0.3
USP8-219ENST00000625664 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.3
USP8-219ENST00000625664 PHF14O94880 888 aa16.89■□□□□ 0.3
USP8-219ENST00000625664 AMIGO3Q86WK7 504 aa16.89■□□□□ 0.3
USP8-219ENST00000625664 ARXQ96QS3 562 aa16.89■□□□□ 0.3
USP8-219ENST00000625664 PTCD1O75127 700 aaKnown RBP16.89■□□□□ 0.29
USP8-219ENST00000625664 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
USP8-219ENST00000625664 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
USP8-219ENST00000625664 MSL1Q68DK7 614 aa16.89■□□□□ 0.29
USP8-219ENST00000625664 FHDC1Q9C0D6 1143 aaPredicted RBP16.89■□□□□ 0.29
USP8-219ENST00000625664 UBR3Q6ZT12 1888 aa16.88■□□□□ 0.29
USP8-219ENST00000625664 POLD1P28340 1107 aa16.88■□□□□ 0.29
USP8-219ENST00000625664 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
USP8-219ENST00000625664 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
USP8-219ENST00000625664 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
USP8-219ENST00000625664 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
USP8-219ENST00000625664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.87■□□□□ 0.29
USP8-219ENST00000625664 GNPATO15228 680 aa16.87■□□□□ 0.29
USP8-219ENST00000625664 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
USP8-219ENST00000625664 GAS2L2Q8NHY3 880 aa16.86■□□□□ 0.29
USP8-219ENST00000625664 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
USP8-219ENST00000625664 MRC1P22897 1456 aa16.86■□□□□ 0.29
USP8-219ENST00000625664 COL24A1Q17RW2 1714 aa16.86■□□□□ 0.29
USP8-219ENST00000625664 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
USP8-219ENST00000625664 SYT17Q9BSW7 474 aa16.85■□□□□ 0.29
USP8-219ENST00000625664 MAP3K5Q99683 1374 aa16.85■□□□□ 0.29
USP8-219ENST00000625664 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
USP8-219ENST00000625664 ADAMTS7Q9UKP4 1686 aa16.85■□□□□ 0.29
USP8-219ENST00000625664 SSFA2P28290 1259 aa16.85■□□□□ 0.29
USP8-219ENST00000625664 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
USP8-219ENST00000625664 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
USP8-219ENST00000625664 COL5A3P25940 1745 aaPredicted RBP16.83■□□□□ 0.28
USP8-219ENST00000625664 IL17REQ8NFR9 667 aa16.82■□□□□ 0.28
USP8-219ENST00000625664 FCHSD2O94868 740 aa16.81■□□□□ 0.28
USP8-219ENST00000625664 TEFQ10587 303 aa16.81■□□□□ 0.28
USP8-219ENST00000625664 RTCBQ9Y3I0 505 aaKnown RBP16.81■□□□□ 0.28
USP8-219ENST00000625664 CNTNAP4Q9C0A0 1308 aa16.81■□□□□ 0.28
USP8-219ENST00000625664 TJP1Q07157 1748 aa16.81■□□□□ 0.28
USP8-219ENST00000625664 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
USP8-219ENST00000625664 RALBP1Q15311 655 aa16.81■□□□□ 0.28
USP8-219ENST00000625664 RC3H1Q5TC82 1133 aaKnown RBP16.81■□□□□ 0.28
USP8-219ENST00000625664 MYH14Q7Z406 1995 aaKnown RBP16.8■□□□□ 0.28
USP8-219ENST00000625664 DNAJC10Q8IXB1 793 aa16.8■□□□□ 0.28
USP8-219ENST00000625664 CRKLP46109 303 aaKnown RBP16.79■□□□□ 0.28
USP8-219ENST00000625664 TRAPPC3LQ5T215 181 aa16.79■□□□□ 0.28
USP8-219ENST00000625664 KCPQ6ZWJ8 1503 aa16.79■□□□□ 0.28
USP8-219ENST00000625664 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
USP8-219ENST00000625664 CICQ96RK0 1608 aaPredicted RBP16.77■□□□□ 0.28
USP8-219ENST00000625664 ARHGEF1Q92888 912 aaKnown RBP16.77■□□□□ 0.28
USP8-219ENST00000625664 TTC5Q8N0Z6 440 aa16.77■□□□□ 0.27
USP8-219ENST00000625664 NLGN2Q8NFZ4 835 aa16.77■□□□□ 0.27
USP8-219ENST00000625664 CEMIPQ8WUJ3 1361 aa16.76■□□□□ 0.27
USP8-219ENST00000625664 SIPA1L3O60292 1781 aaPredicted RBP16.76■□□□□ 0.27
USP8-219ENST00000625664 ADRA2BP18089 450 aa16.76■□□□□ 0.27
USP8-219ENST00000625664 MCM10Q7L590 875 aa16.76■□□□□ 0.27
USP8-219ENST00000625664 RTF1Q92541 710 aaKnown RBP16.76■□□□□ 0.27
USP8-219ENST00000625664 UBR2Q8IWV8 1755 aa16.75■□□□□ 0.27
USP8-219ENST00000625664 NEFMP07197 916 aa16.75■□□□□ 0.27
USP8-219ENST00000625664 RFC4P35249 363 aa16.75■□□□□ 0.27
USP8-219ENST00000625664 DCTN1Q14203 1278 aa16.75■□□□□ 0.27
USP8-219ENST00000625664 INTS5Q6P9B9 1019 aaKnown RBP16.75■□□□□ 0.27
USP8-219ENST00000625664 CCDC87Q9NVE4 849 aa16.75■□□□□ 0.27
USP8-219ENST00000625664 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
USP8-219ENST00000625664 CYP19A1P11511 503 aaPredicted RBP16.74■□□□□ 0.27
USP8-219ENST00000625664 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
USP8-219ENST00000625664 ZNF496Q96IT1 587 aaPredicted RBP16.74■□□□□ 0.27
USP8-219ENST00000625664 C4AP0C0L4 1744 aa16.74■□□□□ 0.27
USP8-219ENST00000625664 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
USP8-219ENST00000625664 KCNQ3O43525 872 aa16.72■□□□□ 0.27
USP8-219ENST00000625664 MMP10P09238 476 aa16.72■□□□□ 0.27
USP8-219ENST00000625664 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
USP8-219ENST00000625664 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
USP8-219ENST00000625664 PLEKHF1Q96S99 279 aa16.72■□□□□ 0.27
USP8-219ENST00000625664 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
USP8-219ENST00000625664 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
USP8-219ENST00000625664 GYS1P13807 737 aa16.72■□□□□ 0.27
USP8-219ENST00000625664 ZBTB1Q9Y2K1 713 aa16.72■□□□□ 0.27
USP8-219ENST00000625664 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.27
USP8-219ENST00000625664 MAPK8IP3Q9UPT6 1336 aa16.71■□□□□ 0.27
USP8-219ENST00000625664 GPR162Q16538 588 aa16.71■□□□□ 0.27
USP8-219ENST00000625664 NLGN1Q8N2Q7 840 aa16.71■□□□□ 0.27
USP8-219ENST00000625664 CD2APQ9Y5K6 639 aa16.71■□□□□ 0.27
USP8-219ENST00000625664 DLG5Q8TDM6 1919 aa16.7■□□□□ 0.26
USP8-219ENST00000625664 HTATSF1O43719 755 aaKnown RBP16.7■□□□□ 0.26
USP8-219ENST00000625664 FMNL2Q96PY5 1086 aa16.7■□□□□ 0.26
USP8-219ENST00000625664 PRKRIP1Q9H875 184 aaPredicted RBP16.7■□□□□ 0.26
USP8-219ENST00000625664 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
USP8-219ENST00000625664 STARD3NLO95772 234 aa16.69■□□□□ 0.26
USP8-219ENST00000625664 CANXP27824 592 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms