RNA–Protein interactions for RNA: ENST00000625521.2

UBAP1-204, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2 BASIC

Gene UBAP1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-204ENST00000625521 SPG7Q9UQ90 795 aa25.4■■□□□ 1.66
UBAP1-204ENST00000625521 RWDD1Q9H446 243 aaPredicted RBP25.39■■□□□ 1.66
UBAP1-204ENST00000625521 ZBTB40Q9NUA8 1239 aa25.39■■□□□ 1.66
UBAP1-204ENST00000625521 PDZRN3Q9UPQ7 1066 aa25.38■■□□□ 1.65
UBAP1-204ENST00000625521 WDR17Q8IZU2 1322 aa25.38■■□□□ 1.65
UBAP1-204ENST00000625521 MEGF6O75095 1541 aa25.38■■□□□ 1.65
UBAP1-204ENST00000625521 SLC4A2P04920 1241 aa25.37■■□□□ 1.65
UBAP1-204ENST00000625521 AHDC1Q5TGY3 1603 aaPredicted RBP25.37■■□□□ 1.65
UBAP1-204ENST00000625521 CCDC30Q5VVM6 783 aa25.37■■□□□ 1.65
UBAP1-204ENST00000625521 ROBO1Q9Y6N7 1651 aa25.37■■□□□ 1.65
UBAP1-204ENST00000625521 SEC24BO95487 1268 aa25.36■■□□□ 1.65
UBAP1-204ENST00000625521 STK31Q9BXU1 1019 aa25.36■■□□□ 1.65
UBAP1-204ENST00000625521 USP35Q9P2H5 1018 aa25.36■■□□□ 1.65
UBAP1-204ENST00000625521 COL5A2P05997 1499 aaPredicted RBP25.36■■□□□ 1.65
UBAP1-204ENST00000625521 ADAMTS7Q9UKP4 1686 aa25.35■■□□□ 1.65
UBAP1-204ENST00000625521 BTBD11A6QL63 1104 aa25.35■■□□□ 1.65
UBAP1-204ENST00000625521 ZBTB7BO15156 539 aaPredicted RBP25.34■■□□□ 1.65
UBAP1-204ENST00000625521 CHMP4AQ9BY43 222 aa25.34■■□□□ 1.65
UBAP1-204ENST00000625521 HOXB7P09629 217 aa25.34■■□□□ 1.65
UBAP1-204ENST00000625521 EIF4A1P60842 406 aaKnown RBP25.34■■□□□ 1.65
UBAP1-204ENST00000625521 BCL11AQ9H165 835 aa25.34■■□□□ 1.65
UBAP1-204ENST00000625521 KDM3BQ7LBC6 1761 aa25.34■■□□□ 1.65
UBAP1-204ENST00000625521 RGS12O14924 1447 aa25.33■■□□□ 1.65
UBAP1-204ENST00000625521 HDAC1Q13547 482 aaPredicted RBP25.33■■□□□ 1.65
UBAP1-204ENST00000625521 PHKG2P15735 406 aa25.32■■□□□ 1.64
UBAP1-204ENST00000625521 IFNL2Q8IZJ0 200 aa25.32■■□□□ 1.64
UBAP1-204ENST00000625521 INTS3Q68E01 1043 aaKnown RBP25.32■■□□□ 1.64
UBAP1-204ENST00000625521 TOM1L2Q6ZVM7 507 aa25.32■■□□□ 1.64
UBAP1-204ENST00000625521 PKD1L3Q7Z443 1732 aa25.3■■□□□ 1.64
UBAP1-204ENST00000625521 CARD10Q9BWT7 1032 aa25.29■■□□□ 1.64
UBAP1-204ENST00000625521 HSP90AB1P08238 724 aaKnown RBP25.28■■□□□ 1.64
UBAP1-204ENST00000625521 HDGFL1Q5TGJ6 251 aa25.28■■□□□ 1.64
UBAP1-204ENST00000625521 DAXXQ9UER7 740 aaPredicted RBP25.27■■□□□ 1.64
UBAP1-204ENST00000625521 KDM6AO15550 1401 aaPredicted RBP25.27■■□□□ 1.64
UBAP1-204ENST00000625521 EVA1CP58658 441 aa25.26■■□□□ 1.63
UBAP1-204ENST00000625521 G2E3Q7L622 706 aa25.26■■□□□ 1.63
UBAP1-204ENST00000625521 DCAF5Q96JK2 942 aa25.26■■□□□ 1.63
UBAP1-204ENST00000625521 COL22A1Q8NFW1 1626 aaPredicted RBP25.26■■□□□ 1.63
UBAP1-204ENST00000625521 PARP4Q9UKK3 1724 aaKnown RBP25.26■■□□□ 1.63
UBAP1-204ENST00000625521 SIPA1L3O60292 1781 aaPredicted RBP25.25■■□□□ 1.63
UBAP1-204ENST00000625521 SLC52A2Q9HAB3 445 aa25.25■■□□□ 1.63
UBAP1-204ENST00000625521 CYP27B1O15528 508 aa25.25■■□□□ 1.63
UBAP1-204ENST00000625521 KCNQ3O43525 872 aa25.25■■□□□ 1.63
UBAP1-204ENST00000625521 FLIIQ13045 1269 aa25.25■■□□□ 1.63
UBAP1-204ENST00000625521 HEG1Q9ULI3 1381 aa25.23■■□□□ 1.63
UBAP1-204ENST00000625521 NECTIN2Q92692 538 aa25.23■■□□□ 1.63
UBAP1-204ENST00000625521 STRN4Q9NRL3 753 aa25.23■■□□□ 1.63
UBAP1-204ENST00000625521 SCN11AQ9UI33 1791 aa25.23■■□□□ 1.63
UBAP1-204ENST00000625521 IL2RBP14784 551 aa25.22■■□□□ 1.63
UBAP1-204ENST00000625521 LARP1Q6PKG0 1096 aaKnown RBP25.22■■□□□ 1.63
UBAP1-204ENST00000625521 MRC1P22897 1456 aa25.22■■□□□ 1.63
UBAP1-204ENST00000625521 CCT4P50991 539 aaKnown RBP25.22■■□□□ 1.63
UBAP1-204ENST00000625521 NFKBIBQ15653 356 aa25.22■■□□□ 1.63
UBAP1-204ENST00000625521 PCDH11XQ9BZA7 1347 aa25.22■■□□□ 1.63
UBAP1-204ENST00000625521 PCDH11YQ9BZA8 1340 aa25.22■■□□□ 1.63
UBAP1-204ENST00000625521 SMC5Q8IY18 1101 aa25.21■■□□□ 1.63
UBAP1-204ENST00000625521 ZCRB1Q8TBF4 217 aaKnown RBP25.21■■□□□ 1.63
UBAP1-204ENST00000625521 TOM1O60784 492 aa25.2■■□□□ 1.63
UBAP1-204ENST00000625521 FKBP5Q13451 457 aaPredicted RBP25.2■■□□□ 1.63
UBAP1-204ENST00000625521 EIF2S2P20042 333 aaKnown RBP25.2■■□□□ 1.62
UBAP1-204ENST00000625521 COL14A1Q05707 1796 aaKnown RBP25.2■■□□□ 1.62
UBAP1-204ENST00000625521 GIGYF1O75420 1035 aaPredicted RBP25.19■■□□□ 1.62
UBAP1-204ENST00000625521 BTG4Q9NY30 223 aa25.19■■□□□ 1.62
UBAP1-204ENST00000625521 CACNA1FO60840 1977 aa25.19■■□□□ 1.62
UBAP1-204ENST00000625521 ZNF790Q6PG37 636 aa25.18■■□□□ 1.62
UBAP1-204ENST00000625521 NFATC2IPQ8NCF5 419 aa25.18■■□□□ 1.62
UBAP1-204ENST00000625521 F6X3S4 739 aa25.17■■□□□ 1.62
UBAP1-204ENST00000625521 C1orf115Q9H7X2 142 aa25.17■■□□□ 1.62
UBAP1-204ENST00000625521 SLC4A10Q6U841 1118 aa25.17■■□□□ 1.62
UBAP1-204ENST00000625521 TBC1D32Q96NH3 1257 aa25.17■■□□□ 1.62
UBAP1-204ENST00000625521 PXDNLA1KZ92 1463 aa25.16■■□□□ 1.62
UBAP1-204ENST00000625521 COL16A1Q07092 1604 aaPredicted RBP25.16■■□□□ 1.62
UBAP1-204ENST00000625521 PHLPP1O60346 1717 aa25.15■■□□□ 1.62
UBAP1-204ENST00000625521 CHPF2Q9P2E5 772 aa25.15■■□□□ 1.62
UBAP1-204ENST00000625521 DBF4Q9UBU7 674 aaPredicted RBP25.15■■□□□ 1.62
UBAP1-204ENST00000625521 CABP4P57796 275 aa25.14■■□□□ 1.62
UBAP1-204ENST00000625521 GCC1Q96CN9 775 aa25.14■■□□□ 1.62
UBAP1-204ENST00000625521 NKX1-1Q15270 411 aaPredicted RBP25.13■■□□□ 1.61
UBAP1-204ENST00000625521 PHAXQ9H814 394 aaKnown RBP25.13■■□□□ 1.61
UBAP1-204ENST00000625521 RPAP2Q8IXW5 612 aaPredicted RBP25.12■■□□□ 1.61
UBAP1-204ENST00000625521 SLC39A6Q13433 755 aa25.12■■□□□ 1.61
UBAP1-204ENST00000625521 SIRT2Q8IXJ6 389 aa25.12■■□□□ 1.61
UBAP1-204ENST00000625521 TTC5Q8N0Z6 440 aa25.12■■□□□ 1.61
UBAP1-204ENST00000625521 MEIS3Q99687 375 aa25.12■■□□□ 1.61
UBAP1-204ENST00000625521 ERVV-2B6SEH9 535 aa25.1■■□□□ 1.61
UBAP1-204ENST00000625521 UPF2Q9HAU5 1272 aaKnown RBP25.1■■□□□ 1.61
UBAP1-204ENST00000625521 ATP10DQ9P241 1426 aa25.1■■□□□ 1.61
UBAP1-204ENST00000625521 ANKRD44Q8N8A2 993 aa25.1■■□□□ 1.61
UBAP1-204ENST00000625521 PIP4K2BP78356 416 aa25.09■■□□□ 1.61
UBAP1-204ENST00000625521 NUCB1Q02818 461 aa25.09■■□□□ 1.61
UBAP1-204ENST00000625521 BECN1Q14457 450 aa25.08■■□□□ 1.61
UBAP1-204ENST00000625521 N4BP2Q86UW6 1770 aaPredicted RBP25.07■■□□□ 1.6
UBAP1-204ENST00000625521 PRAMEF22A3QJZ6 481 aa25.07■■□□□ 1.6
UBAP1-204ENST00000625521 GNAI3P08754 354 aa25.07■■□□□ 1.6
UBAP1-204ENST00000625521 CEP85Q6P2H3 762 aa25.07■■□□□ 1.6
UBAP1-204ENST00000625521 FMNL2Q96PY5 1086 aa25.07■■□□□ 1.6
UBAP1-204ENST00000625521 HYPKQ9NX55 129 aa25.07■■□□□ 1.6
UBAP1-204ENST00000625521 DDX54Q8TDD1 881 aaKnown RBP25.07■■□□□ 1.6
UBAP1-204ENST00000625521 ZNF496Q96IT1 587 aaPredicted RBP25.07■■□□□ 1.6
UBAP1-204ENST00000625521 SHANK3Q9BYB0 1731 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms