RNA–Protein interactions for RNA: ENST00000624247.1

SMTN-224, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-224ENST00000624247 ITPK1Q13572 414 aa28.71■■■□□ 2.19
SMTN-224ENST00000624247 AMIGO3Q86WK7 504 aa28.71■■■□□ 2.19
SMTN-224ENST00000624247 ARXQ96QS3 562 aa28.71■■■□□ 2.19
SMTN-224ENST00000624247 SMIM5Q71RC9 77 aa28.7■■■□□ 2.18
SMTN-224ENST00000624247 AK7Q96M32 723 aa28.7■■■□□ 2.18
SMTN-224ENST00000624247 ATP6V1AP38606 617 aa28.69■■■□□ 2.18
SMTN-224ENST00000624247 MSL1Q68DK7 614 aa28.68■■■□□ 2.18
SMTN-224ENST00000624247 AKAP4Q5JQC9 854 aa28.67■■■□□ 2.18
SMTN-224ENST00000624247 RBM42Q9BTD8 480 aaKnown RBP28.67■■■□□ 2.18
SMTN-224ENST00000624247 PHF14O94880 888 aa28.66■■■□□ 2.18
SMTN-224ENST00000624247 PPP2R1AP30153 589 aa28.66■■■□□ 2.18
SMTN-224ENST00000624247 MTHFSDQ2M296 383 aaKnown RBP28.66■■■□□ 2.18
SMTN-224ENST00000624247 NFATC2IPQ8NCF5 419 aa28.66■■■□□ 2.18
SMTN-224ENST00000624247 SLC4A9Q96Q91 983 aa28.66■■■□□ 2.18
SMTN-224ENST00000624247 POLD1P28340 1107 aa28.65■■■□□ 2.18
SMTN-224ENST00000624247 SYT17Q9BSW7 474 aa28.65■■■□□ 2.18
SMTN-224ENST00000624247 HMGB2P26583 209 aaKnown RBP28.64■■■□□ 2.18
SMTN-224ENST00000624247 KLHL34Q8N239 644 aa28.64■■■□□ 2.18
SMTN-224ENST00000624247 LGR6Q9HBX8 967 aa28.64■■■□□ 2.18
SMTN-224ENST00000624247 COL5A3P25940 1745 aaPredicted RBP28.63■■■□□ 2.17
SMTN-224ENST00000624247 CFAP53Q96M91 514 aa28.63■■■□□ 2.17
SMTN-224ENST00000624247 ZNF831Q5JPB2 1677 aa28.63■■■□□ 2.17
SMTN-224ENST00000624247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.61■■■□□ 2.17
SMTN-224ENST00000624247 GNPATO15228 680 aa28.61■■■□□ 2.17
SMTN-224ENST00000624247 FLAD1Q8NFF5 587 aa28.61■■■□□ 2.17
SMTN-224ENST00000624247 RNMTO43148 476 aaKnown RBP28.6■■■□□ 2.17
SMTN-224ENST00000624247 PTCD1O75127 700 aaKnown RBP28.6■■■□□ 2.17
SMTN-224ENST00000624247 ADAMTS7Q9UKP4 1686 aa28.6■■■□□ 2.17
SMTN-224ENST00000624247 MRC1P22897 1456 aa28.59■■■□□ 2.17
SMTN-224ENST00000624247 SLC52A2Q9HAB3 445 aa28.59■■■□□ 2.17
SMTN-224ENST00000624247 MAP3K5Q99683 1374 aa28.58■■■□□ 2.17
SMTN-224ENST00000624247 SSFA2P28290 1259 aa28.57■■■□□ 2.16
SMTN-224ENST00000624247 UTRNP46939 3433 aa28.57■■■□□ 2.16
SMTN-224ENST00000624247 TJP1Q07157 1748 aa28.57■■■□□ 2.16
SMTN-224ENST00000624247 MYH14Q7Z406 1995 aaKnown RBP28.57■■■□□ 2.16
SMTN-224ENST00000624247 DCAF8L1A6NGE4 600 aa28.56■■■□□ 2.16
SMTN-224ENST00000624247 PRKAR2BP31323 418 aa28.55■■■□□ 2.16
SMTN-224ENST00000624247 RSPH6AQ9H0K4 717 aa28.54■■■□□ 2.16
SMTN-224ENST00000624247 SLC39A6Q13433 755 aa28.53■■■□□ 2.16
SMTN-224ENST00000624247 NUDCQ9Y266 331 aa28.53■■■□□ 2.16
SMTN-224ENST00000624247 U2AF1L5P0DN76 240 aaPredicted RBP28.52■■■□□ 2.16
SMTN-224ENST00000624247 U2AF1Q01081 240 aaKnown RBP eCLIP28.52■■■□□ 2.16
SMTN-224ENST00000624247 PHACTR3Q96KR7 559 aa28.52■■■□□ 2.16
SMTN-224ENST00000624247 GOLGB1Q14789 3259 aaKnown RBP28.51■■■□□ 2.16
SMTN-224ENST00000624247 CICQ96RK0 1608 aaPredicted RBP28.51■■■□□ 2.15
SMTN-224ENST00000624247 CNTNAP4Q9C0A0 1308 aa28.51■■■□□ 2.15
SMTN-224ENST00000624247 NLGN2Q8NFZ4 835 aa28.51■■■□□ 2.15
SMTN-224ENST00000624247 GAS2L2Q8NHY3 880 aa28.51■■■□□ 2.15
SMTN-224ENST00000624247 RTCBQ9Y3I0 505 aaKnown RBP28.5■■■□□ 2.15
SMTN-224ENST00000624247 KCPQ6ZWJ8 1503 aa28.49■■■□□ 2.15
SMTN-224ENST00000624247 GNAT3A8MTJ3 354 aa28.48■■■□□ 2.15
SMTN-224ENST00000624247 RC3H1Q5TC82 1133 aaKnown RBP28.48■■■□□ 2.15
SMTN-224ENST00000624247 C4AP0C0L4 1744 aa28.48■■■□□ 2.15
SMTN-224ENST00000624247 SIPA1L3O60292 1781 aaPredicted RBP28.47■■■□□ 2.15
SMTN-224ENST00000624247 CRKLP46109 303 aaKnown RBP28.47■■■□□ 2.15
SMTN-224ENST00000624247 DDX10Q13206 875 aaKnown RBP28.47■■■□□ 2.15
SMTN-224ENST00000624247 IL17REQ8NFR9 667 aa28.47■■■□□ 2.15
SMTN-224ENST00000624247 TRAPPC3LQ5T215 181 aa28.46■■■□□ 2.15
SMTN-224ENST00000624247 UBR2Q8IWV8 1755 aa28.46■■■□□ 2.15
SMTN-224ENST00000624247 DNAJC10Q8IXB1 793 aa28.45■■■□□ 2.14
SMTN-224ENST00000624247 RPS6KA4O75676 772 aa28.44■■■□□ 2.14
SMTN-224ENST00000624247 ARHGEF1Q92888 912 aaKnown RBP28.44■■■□□ 2.14
SMTN-224ENST00000624247 YY1P25490 414 aa28.43■■■□□ 2.14
SMTN-224ENST00000624247 TEFQ10587 303 aa28.42■■■□□ 2.14
SMTN-224ENST00000624247 PELP1Q8IZL8 1130 aaKnown RBP28.42■■■□□ 2.14
SMTN-224ENST00000624247 FCHSD2O94868 740 aa28.41■■■□□ 2.14
SMTN-224ENST00000624247 ADRA2BP18089 450 aa28.41■■■□□ 2.14
SMTN-224ENST00000624247 GPR162Q16538 588 aa28.4■■■□□ 2.14
SMTN-224ENST00000624247 RFC4P35249 363 aa28.39■■■□□ 2.14
SMTN-224ENST00000624247 INTS5Q6P9B9 1019 aaKnown RBP28.39■■■□□ 2.14
SMTN-224ENST00000624247 CEMIPQ8WUJ3 1361 aa28.38■■■□□ 2.13
SMTN-224ENST00000624247 MMP10P09238 476 aa28.38■■■□□ 2.13
SMTN-224ENST00000624247 TTC5Q8N0Z6 440 aa28.38■■■□□ 2.13
SMTN-224ENST00000624247 CCDC87Q9NVE4 849 aa28.37■■■□□ 2.13
SMTN-224ENST00000624247 SRP68Q9UHB9 627 aaKnown RBP28.37■■■□□ 2.13
SMTN-224ENST00000624247 CHD4Q14839 1912 aa28.36■■■□□ 2.13
SMTN-224ENST00000624247 CYP19A1P11511 503 aaPredicted RBP28.36■■■□□ 2.13
SMTN-224ENST00000624247 GYS1P13807 737 aa28.36■■■□□ 2.13
SMTN-224ENST00000624247 CD2APQ9Y5K6 639 aa28.36■■■□□ 2.13
SMTN-224ENST00000624247 MCM10Q7L590 875 aa28.35■■■□□ 2.13
SMTN-224ENST00000624247 DLG5Q8TDM6 1919 aa28.34■■■□□ 2.13
SMTN-224ENST00000624247 RALBP1Q15311 655 aa28.34■■■□□ 2.13
SMTN-224ENST00000624247 ZNF790Q6PG37 636 aa28.34■■■□□ 2.13
SMTN-224ENST00000624247 ZNF496Q96IT1 587 aaPredicted RBP28.34■■■□□ 2.13
SMTN-224ENST00000624247 DCTN1Q14203 1278 aa28.33■■■□□ 2.13
SMTN-224ENST00000624247 ZBTB1Q9Y2K1 713 aa28.33■■■□□ 2.13
SMTN-224ENST00000624247 YBX3P16989 372 aaKnown RBP eCLIP28.32■■■□□ 2.12
SMTN-224ENST00000624247 VSIG10Q8N0Z9 540 aa28.32■■■□□ 2.12
SMTN-224ENST00000624247 NLGN1Q8N2Q7 840 aa28.32■■■□□ 2.12
SMTN-224ENST00000624247 RTF1Q92541 710 aaKnown RBP28.32■■■□□ 2.12
SMTN-224ENST00000624247 SOS1Q07889 1333 aaPredicted RBP28.32■■■□□ 2.12
SMTN-224ENST00000624247 USP42Q9H9J4 1324 aaKnown RBP28.32■■■□□ 2.12
SMTN-224ENST00000624247 KCNQ3O43525 872 aa28.31■■■□□ 2.12
SMTN-224ENST00000624247 HEG1Q9ULI3 1381 aa28.3■■■□□ 2.12
SMTN-224ENST00000624247 BTBD11A6QL63 1104 aa28.3■■■□□ 2.12
SMTN-224ENST00000624247 WWC3Q9ULE0 1092 aa28.3■■■□□ 2.12
SMTN-224ENST00000624247 COL15A1P39059 1388 aa28.28■■■□□ 2.12
SMTN-224ENST00000624247 KIF13BQ9NQT8 1826 aa28.28■■■□□ 2.12
SMTN-224ENST00000624247 FKBP8Q14318 412 aa28.28■■■□□ 2.12
SMTN-224ENST00000624247 PLEKHF1Q96S99 279 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms