RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 HSPA1AP0DMV8 641 aaKnown RBP10.33□□□□□ -0.76
LINC00963-218ENST00000624138 HSPA1BP0DMV9 641 aaKnown RBP10.33□□□□□ -0.76
LINC00963-218ENST00000624138 KCNA3P22001 575 aa10.33□□□□□ -0.76
LINC00963-218ENST00000624138 PIGBQ92521 554 aa10.33□□□□□ -0.76
LINC00963-218ENST00000624138 PUS7Q96PZ0 661 aaKnown RBP10.33□□□□□ -0.76
LINC00963-218ENST00000624138 RRAGCQ9HB90 399 aa10.33□□□□□ -0.76
LINC00963-218ENST00000624138 LOC102724428A0A0B4J2F2 783 aa10.32□□□□□ -0.76
LINC00963-218ENST00000624138 FCHSD2O94868 740 aa10.32□□□□□ -0.76
LINC00963-218ENST00000624138 DPEP1P16444 411 aa10.32□□□□□ -0.76
LINC00963-218ENST00000624138 SIK1P57059 783 aa10.32□□□□□ -0.76
LINC00963-218ENST00000624138 NKX1-1Q15270 411 aaPredicted RBP10.32□□□□□ -0.76
LINC00963-218ENST00000624138 USHBP1Q8N6Y0 703 aa10.32□□□□□ -0.76
LINC00963-218ENST00000624138 SMC1BQ8NDV3 1235 aa10.32□□□□□ -0.76
LINC00963-218ENST00000624138 COG3Q96JB2 828 aa10.32□□□□□ -0.76
LINC00963-218ENST00000624138 KIF20BQ96Q89 1820 aa10.31□□□□□ -0.76
LINC00963-218ENST00000624138 NLGN1Q8N2Q7 840 aa10.31□□□□□ -0.76
LINC00963-218ENST00000624138 AFDNP55196 1824 aaKnown RBP10.3□□□□□ -0.76
LINC00963-218ENST00000624138 VIRMAQ69YN4 1812 aaKnown RBP10.3□□□□□ -0.76
LINC00963-218ENST00000624138 DLEC1Q9Y238 1755 aa10.3□□□□□ -0.76
LINC00963-218ENST00000624138 GNPATO15228 680 aa10.3□□□□□ -0.76
LINC00963-218ENST00000624138 TMF1P82094 1093 aa10.3□□□□□ -0.76
LINC00963-218ENST00000624138 ITPK1Q13572 414 aa10.3□□□□□ -0.76
LINC00963-218ENST00000624138 DCAF5Q96JK2 942 aa10.3□□□□□ -0.76
LINC00963-218ENST00000624138 CCDC87Q9NVE4 849 aa10.3□□□□□ -0.76
LINC00963-218ENST00000624138 SMG6Q86US8 1419 aaKnown RBP10.3□□□□□ -0.76
LINC00963-218ENST00000624138 TIAM2Q8IVF5 1701 aa10.3□□□□□ -0.76
LINC00963-218ENST00000624138 INSRP06213 1382 aa10.28□□□□□ -0.76
LINC00963-218ENST00000624138 NCAPD2Q15021 1401 aa10.28□□□□□ -0.76
LINC00963-218ENST00000624138 ATP6V1AP38606 617 aa10.28□□□□□ -0.76
LINC00963-218ENST00000624138 RRS1Q15050 365 aaKnown RBP10.28□□□□□ -0.76
LINC00963-218ENST00000624138 TRAPPC3LQ5T215 181 aa10.28□□□□□ -0.76
LINC00963-218ENST00000624138 RNF181Q9P0P0 153 aa10.28□□□□□ -0.76
LINC00963-218ENST00000624138 PIM2Q9P1W9 311 aa10.28□□□□□ -0.76
LINC00963-218ENST00000624138 ASAP1Q9ULH1 1129 aa10.28□□□□□ -0.76
LINC00963-218ENST00000624138 ANKRD26Q9UPS8 1709 aa10.27□□□□□ -0.76
LINC00963-218ENST00000624138 GYS1P13807 737 aa10.27□□□□□ -0.77
LINC00963-218ENST00000624138 ADRA2BP18089 450 aa10.27□□□□□ -0.77
LINC00963-218ENST00000624138 HSP90AB2PQ58FF8 381 aa10.27□□□□□ -0.77
LINC00963-218ENST00000624138 RC3H1Q5TC82 1133 aaKnown RBP10.27□□□□□ -0.77
LINC00963-218ENST00000624138 ARHGEF1Q92888 912 aaKnown RBP10.27□□□□□ -0.77
LINC00963-218ENST00000624138 RTCBQ9Y3I0 505 aaKnown RBP10.27□□□□□ -0.77
LINC00963-218ENST00000624138 PARP3Q9Y6F1 533 aa10.27□□□□□ -0.77
LINC00963-218ENST00000624138 ZC3H4Q9UPT8 1303 aaKnown RBP10.27□□□□□ -0.77
LINC00963-218ENST00000624138 KIF24Q5T7B8 1368 aa10.26□□□□□ -0.77
LINC00963-218ENST00000624138 KDM6AO15550 1401 aaPredicted RBP10.26□□□□□ -0.77
LINC00963-218ENST00000624138 DALRD3Q5D0E6 543 aaKnown RBP10.26□□□□□ -0.77
LINC00963-218ENST00000624138 ATG3Q9NT62 314 aa10.26□□□□□ -0.77
LINC00963-218ENST00000624138 KDRP35968 1356 aa10.26□□□□□ -0.77
LINC00963-218ENST00000624138 ADAMTS7Q9UKP4 1686 aa10.25□□□□□ -0.77
LINC00963-218ENST00000624138 FYB1O15117 783 aa10.25□□□□□ -0.77
LINC00963-218ENST00000624138 VEGFAP15692 232 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-218ENST00000624138 TMOD3Q9NYL9 352 aa10.25□□□□□ -0.77
LINC00963-218ENST00000624138 PCDH10Q9P2E7 1040 aa10.25□□□□□ -0.77
LINC00963-218ENST00000624138 FER1L6Q2WGJ9 1857 aa10.25□□□□□ -0.77
LINC00963-218ENST00000624138 FLT4P35916 1363 aa10.25□□□□□ -0.77
LINC00963-218ENST00000624138 NRXN2Q9P2S2 1712 aa10.24□□□□□ -0.77
LINC00963-218ENST00000624138 GLTPD2A6NH11 291 aa10.24□□□□□ -0.77
LINC00963-218ENST00000624138 RPS6KA4O75676 772 aa10.24□□□□□ -0.77
LINC00963-218ENST00000624138 SLC4A9Q96Q91 983 aa10.24□□□□□ -0.77
LINC00963-218ENST00000624138 SIN3AQ96ST3 1273 aa10.24□□□□□ -0.77
LINC00963-218ENST00000624138 CARD11Q9BXL7 1154 aa10.24□□□□□ -0.77
LINC00963-218ENST00000624138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC00963-218ENST00000624138 SPG7Q9UQ90 795 aa10.24□□□□□ -0.77
LINC00963-218ENST00000624138 RFC4P35249 363 aa10.23□□□□□ -0.77
LINC00963-218ENST00000624138 PRDM10Q9NQV6 1147 aa10.23□□□□□ -0.77
LINC00963-218ENST00000624138 CNTNAP4Q9C0A0 1308 aa10.23□□□□□ -0.77
LINC00963-218ENST00000624138 TONSLQ96HA7 1378 aa10.23□□□□□ -0.77
LINC00963-218ENST00000624138 TJP1Q07157 1748 aa10.22□□□□□ -0.77
LINC00963-218ENST00000624138 POTECB2RU33 542 aa10.22□□□□□ -0.77
LINC00963-218ENST00000624138 IFNL2Q8IZJ0 200 aa10.22□□□□□ -0.77
LINC00963-218ENST00000624138 GGNBP2Q9H3C7 697 aa10.22□□□□□ -0.77
LINC00963-218ENST00000624138 SCN4AP35499 1836 aa10.21□□□□□ -0.77
LINC00963-218ENST00000624138 CACNA1SQ13698 1873 aa10.21□□□□□ -0.77
LINC00963-218ENST00000624138 FOXN1O15353 648 aa10.21□□□□□ -0.77
LINC00963-218ENST00000624138 PHKG2P15735 406 aa10.21□□□□□ -0.77
LINC00963-218ENST00000624138 LMNB1P20700 586 aa10.21□□□□□ -0.77
LINC00963-218ENST00000624138 CHRNA5P30532 468 aa10.21□□□□□ -0.77
LINC00963-218ENST00000624138 RASSF7Q02833 373 aa10.2□□□□□ -0.78
LINC00963-218ENST00000624138 DDR1Q08345 913 aa10.2□□□□□ -0.78
LINC00963-218ENST00000624138 TESK2Q96S53 571 aa10.2□□□□□ -0.78
LINC00963-218ENST00000624138 CREBZFQ9NS37 354 aa10.2□□□□□ -0.78
LINC00963-218ENST00000624138 ANKRD31Q8N7Z5 1873 aa10.19□□□□□ -0.78
LINC00963-218ENST00000624138 SCN11AQ9UI33 1791 aa10.19□□□□□ -0.78
LINC00963-218ENST00000624138 ERVV-2B6SEH9 535 aa10.19□□□□□ -0.78
LINC00963-218ENST00000624138 TM4SF1P30408 202 aa10.19□□□□□ -0.78
LINC00963-218ENST00000624138 FKBP8Q14318 412 aa10.19□□□□□ -0.78
LINC00963-218ENST00000624138 RBM42Q9BTD8 480 aaKnown RBP10.19□□□□□ -0.78
LINC00963-218ENST00000624138 USP42Q9H9J4 1324 aaKnown RBP10.18□□□□□ -0.78
LINC00963-218ENST00000624138 POLRMTO00411 1230 aaKnown RBP10.18□□□□□ -0.78
LINC00963-218ENST00000624138 SLC24A1O60721 1099 aa10.18□□□□□ -0.78
LINC00963-218ENST00000624138 NEUROD1Q13562 356 aa10.18□□□□□ -0.78
LINC00963-218ENST00000624138 EYA1Q99502 592 aa10.18□□□□□ -0.78
LINC00963-218ENST00000624138 SRP68Q9UHB9 627 aaKnown RBP10.18□□□□□ -0.78
LINC00963-218ENST00000624138 MKRN1Q9UHC7 482 aaKnown RBP10.18□□□□□ -0.78
LINC00963-218ENST00000624138 CNTNAP1P78357 1384 aa10.17□□□□□ -0.78
LINC00963-218ENST00000624138 ARFGEF2Q9Y6D5 1785 aa10.17□□□□□ -0.78
LINC00963-218ENST00000624138 CTCFP49711 727 aaPredicted RBP10.17□□□□□ -0.78
LINC00963-218ENST00000624138 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
LINC00963-218ENST00000624138 WASHC2AQ641Q2 1341 aa10.16□□□□□ -0.78
LINC00963-218ENST00000624138 CHADLQ6NUI6 762 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms