RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 PRDM11Q9NQV5 511 aa23.37■■□□□ 1.33
PCDHB2-202ENST00000622947 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.37■■□□□ 1.33
PCDHB2-202ENST00000622947 SIPA1L3O60292 1781 aaPredicted RBP23.37■■□□□ 1.33
PCDHB2-202ENST00000622947 PDE4AP27815 886 aa23.37■■□□□ 1.33
PCDHB2-202ENST00000622947 NECTIN2Q92692 538 aa23.37■■□□□ 1.33
PCDHB2-202ENST00000622947 EIF4A1P60842 406 aaKnown RBP23.36■■□□□ 1.33
PCDHB2-202ENST00000622947 HDAC1Q13547 482 aaPredicted RBP23.35■■□□□ 1.33
PCDHB2-202ENST00000622947 TEFQ10587 303 aa23.35■■□□□ 1.33
PCDHB2-202ENST00000622947 BACH2Q9BYV9 841 aa23.35■■□□□ 1.33
PCDHB2-202ENST00000622947 C1orf115Q9H7X2 142 aa23.35■■□□□ 1.33
PCDHB2-202ENST00000622947 ROBO1Q9Y6N7 1651 aa23.34■■□□□ 1.33
PCDHB2-202ENST00000622947 PTPRCP08575 1304 aa23.34■■□□□ 1.33
PCDHB2-202ENST00000622947 INTS3Q68E01 1043 aaKnown RBP23.34■■□□□ 1.33
PCDHB2-202ENST00000622947 OVOS2A0A0G2JMS6 1433 aa23.34■■□□□ 1.33
PCDHB2-202ENST00000622947 BTBD11A6QL63 1104 aa23.33■■□□□ 1.33
PCDHB2-202ENST00000622947 TATP17735 454 aaPredicted RBP23.33■■□□□ 1.33
PCDHB2-202ENST00000622947 CACNA1FO60840 1977 aa23.33■■□□□ 1.33
PCDHB2-202ENST00000622947 COL5A2P05997 1499 aaPredicted RBP23.33■■□□□ 1.33
PCDHB2-202ENST00000622947 KDM6AO15550 1401 aaPredicted RBP23.33■■□□□ 1.33
PCDHB2-202ENST00000622947 PDZRN3Q9UPQ7 1066 aa23.33■■□□□ 1.33
PCDHB2-202ENST00000622947 SCN11AQ9UI33 1791 aa23.33■■□□□ 1.32
PCDHB2-202ENST00000622947 PKD1L3Q7Z443 1732 aa23.32■■□□□ 1.32
PCDHB2-202ENST00000622947 WDR17Q8IZU2 1322 aa23.31■■□□□ 1.32
PCDHB2-202ENST00000622947 F6X3S4 739 aa23.31■■□□□ 1.32
PCDHB2-202ENST00000622947 PHKG2P15735 406 aa23.31■■□□□ 1.32
PCDHB2-202ENST00000622947 CCDC30Q5VVM6 783 aa23.31■■□□□ 1.32
PCDHB2-202ENST00000622947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.31■■□□□ 1.32
PCDHB2-202ENST00000622947 CYP27B1O15528 508 aa23.3■■□□□ 1.32
PCDHB2-202ENST00000622947 SIRT2Q8IXJ6 389 aa23.3■■□□□ 1.32
PCDHB2-202ENST00000622947 SOS1Q07889 1333 aaPredicted RBP23.3■■□□□ 1.32
PCDHB2-202ENST00000622947 STK31Q9BXU1 1019 aa23.29■■□□□ 1.32
PCDHB2-202ENST00000622947 SPG7Q9UQ90 795 aa23.28■■□□□ 1.32
PCDHB2-202ENST00000622947 FLIIQ13045 1269 aa23.28■■□□□ 1.32
PCDHB2-202ENST00000622947 HDGFL1Q5TGJ6 251 aa23.28■■□□□ 1.32
PCDHB2-202ENST00000622947 SMC5Q8IY18 1101 aa23.28■■□□□ 1.32
PCDHB2-202ENST00000622947 USP35Q9P2H5 1018 aa23.28■■□□□ 1.32
PCDHB2-202ENST00000622947 TOM1L2Q6ZVM7 507 aa23.27■■□□□ 1.31
PCDHB2-202ENST00000622947 EIF2S2P20042 333 aaKnown RBP23.26■■□□□ 1.31
PCDHB2-202ENST00000622947 C8orf34Q49A92 452 aa23.26■■□□□ 1.31
PCDHB2-202ENST00000622947 HEG1Q9ULI3 1381 aa23.26■■□□□ 1.31
PCDHB2-202ENST00000622947 LARP1Q6PKG0 1096 aaKnown RBP23.25■■□□□ 1.31
PCDHB2-202ENST00000622947 IFNL2Q8IZJ0 200 aa23.25■■□□□ 1.31
PCDHB2-202ENST00000622947 AHDC1Q5TGY3 1603 aaPredicted RBP23.25■■□□□ 1.31
PCDHB2-202ENST00000622947 PRAMEF22A3QJZ6 481 aa23.25■■□□□ 1.31
PCDHB2-202ENST00000622947 PHAXQ9H814 394 aaKnown RBP23.25■■□□□ 1.31
PCDHB2-202ENST00000622947 CHMP4BQ9H444 224 aaKnown RBP23.24■■□□□ 1.31
PCDHB2-202ENST00000622947 SLC4A10Q6U841 1118 aa23.24■■□□□ 1.31
PCDHB2-202ENST00000622947 MEIS3Q99687 375 aa23.24■■□□□ 1.31
PCDHB2-202ENST00000622947 SLC52A2Q9HAB3 445 aa23.24■■□□□ 1.31
PCDHB2-202ENST00000622947 STRN4Q9NRL3 753 aa23.24■■□□□ 1.31
PCDHB2-202ENST00000622947 PLEKHG2Q9H7P9 1386 aa23.24■■□□□ 1.31
PCDHB2-202ENST00000622947 HOXB7P09629 217 aa23.23■■□□□ 1.31
PCDHB2-202ENST00000622947 NFATC2IPQ8NCF5 419 aa23.23■■□□□ 1.31
PCDHB2-202ENST00000622947 PARP4Q9UKK3 1724 aaKnown RBP23.23■■□□□ 1.31
PCDHB2-202ENST00000622947 GIGYF1O75420 1035 aaPredicted RBP23.23■■□□□ 1.31
PCDHB2-202ENST00000622947 SLC39A6Q13433 755 aa23.23■■□□□ 1.31
PCDHB2-202ENST00000622947 FKBP5Q13451 457 aaPredicted RBP23.23■■□□□ 1.31
PCDHB2-202ENST00000622947 CHPF2Q9P2E5 772 aa23.22■■□□□ 1.31
PCDHB2-202ENST00000622947 ATP10DQ9P241 1426 aa23.22■■□□□ 1.31
PCDHB2-202ENST00000622947 ANXA1P04083 346 aa23.21■■□□□ 1.31
PCDHB2-202ENST00000622947 FAM161AQ3B820 660 aa23.21■■□□□ 1.31
PCDHB2-202ENST00000622947 CARD10Q9BWT7 1032 aa23.21■■□□□ 1.31
PCDHB2-202ENST00000622947 SHANK3Q9BYB0 1731 aa23.2■■□□□ 1.3
PCDHB2-202ENST00000622947 MRC1P22897 1456 aa23.2■■□□□ 1.3
PCDHB2-202ENST00000622947 DCAF5Q96JK2 942 aa23.2■■□□□ 1.3
PCDHB2-202ENST00000622947 ZNF790Q6PG37 636 aa23.18■■□□□ 1.3
PCDHB2-202ENST00000622947 N4BP2Q86UW6 1770 aaPredicted RBP23.18■■□□□ 1.3
PCDHB2-202ENST00000622947 COL22A1Q8NFW1 1626 aaPredicted RBP23.18■■□□□ 1.3
PCDHB2-202ENST00000622947 COL16A1Q07092 1604 aaPredicted RBP23.18■■□□□ 1.3
PCDHB2-202ENST00000622947 CCT4P50991 539 aaKnown RBP23.17■■□□□ 1.3
PCDHB2-202ENST00000622947 EVA1CP58658 441 aa23.17■■□□□ 1.3
PCDHB2-202ENST00000622947 NUCB1Q02818 461 aa23.17■■□□□ 1.3
PCDHB2-202ENST00000622947 BTG4Q9NY30 223 aa23.17■■□□□ 1.3
PCDHB2-202ENST00000622947 C5P01031 1676 aa23.17■■□□□ 1.3
PCDHB2-202ENST00000622947 PROSER3Q2NL68 480 aa23.17■■□□□ 1.3
PCDHB2-202ENST00000622947 ZCRB1Q8TBF4 217 aaKnown RBP23.17■■□□□ 1.3
PCDHB2-202ENST00000622947 IL2RBP14784 551 aa23.16■■□□□ 1.3
PCDHB2-202ENST00000622947 CEP85Q6P2H3 762 aa23.16■■□□□ 1.3
PCDHB2-202ENST00000622947 ANKRD44Q8N8A2 993 aa23.14■■□□□ 1.3
PCDHB2-202ENST00000622947 LNPKQ9C0E8 428 aa23.14■■□□□ 1.29
PCDHB2-202ENST00000622947 COL14A1Q05707 1796 aaKnown RBP23.13■■□□□ 1.29
PCDHB2-202ENST00000622947 PCDH11XQ9BZA7 1347 aa23.13■■□□□ 1.29
PCDHB2-202ENST00000622947 PCDH11YQ9BZA8 1340 aa23.13■■□□□ 1.29
PCDHB2-202ENST00000622947 PHLPP1O60346 1717 aa23.13■■□□□ 1.29
PCDHB2-202ENST00000622947 GCC1Q96CN9 775 aa23.13■■□□□ 1.29
PCDHB2-202ENST00000622947 ZNF496Q96IT1 587 aaPredicted RBP23.13■■□□□ 1.29
PCDHB2-202ENST00000622947 PXDNLA1KZ92 1463 aa23.12■■□□□ 1.29
PCDHB2-202ENST00000622947 HSP90AB1P08238 724 aaKnown RBP23.12■■□□□ 1.29
PCDHB2-202ENST00000622947 CHD1LQ86WJ1 897 aa23.12■■□□□ 1.29
PCDHB2-202ENST00000622947 DBF4Q9UBU7 674 aaPredicted RBP23.12■■□□□ 1.29
PCDHB2-202ENST00000622947 PI4KAP2A4QPH2 592 aa23.1■■□□□ 1.29
PCDHB2-202ENST00000622947 PDIA6Q15084 440 aa23.1■■□□□ 1.29
PCDHB2-202ENST00000622947 ANKRD45Q5TZF3 282 aa23.1■■□□□ 1.29
PCDHB2-202ENST00000622947 NPM2Q86SE8 214 aaKnown RBP23.1■■□□□ 1.29
PCDHB2-202ENST00000622947 RPAP2Q8IXW5 612 aaPredicted RBP23.1■■□□□ 1.29
PCDHB2-202ENST00000622947 PI4KAP1Q8N8J0 262 aa23.1■■□□□ 1.29
PCDHB2-202ENST00000622947 ADCY9O60503 1353 aa23.1■■□□□ 1.29
PCDHB2-202ENST00000622947 GLI3P10071 1580 aa23.1■■□□□ 1.29
PCDHB2-202ENST00000622947 CABP4P57796 275 aa23.1■■□□□ 1.29
PCDHB2-202ENST00000622947 DCTPP1Q9H773 170 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms