RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 CCDC112Q8NEF3 446 aa21.94■■□□□ 1.1
GTF2IP1-210ENST00000622829 PRDM15P57071 1507 aaPredicted RBP21.94■■□□□ 1.1
GTF2IP1-210ENST00000622829 C9orf78Q9NZ63 289 aaPredicted RBP21.94■■□□□ 1.1
GTF2IP1-210ENST00000622829 ATP2B3Q16720 1220 aa21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 MSH6P52701 1360 aa21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 IFIT2P09913 472 aaKnown RBP21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 DDIT3P35638 169 aa21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 CHD1O14646 1710 aa21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 ZKSCAN1P17029 563 aaPredicted RBP21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 GNL2Q13823 731 aaKnown RBP21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 HOMER1Q86YM7 354 aa21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 PHF23Q9BUL5 403 aaPredicted RBP21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 TRPM1Q7Z4N2 1603 aa21.93■■□□□ 1.1
GTF2IP1-210ENST00000622829 SYT1P21579 422 aa21.92■■□□□ 1.1
GTF2IP1-210ENST00000622829 AK2P54819 239 aa21.92■■□□□ 1.1
GTF2IP1-210ENST00000622829 FAM184AQ8NB25 1140 aa21.92■■□□□ 1.1
GTF2IP1-210ENST00000622829 LRRC2Q9BYS8 371 aa21.92■■□□□ 1.1
GTF2IP1-210ENST00000622829 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.92■■□□□ 1.1
GTF2IP1-210ENST00000622829 ZBTB22O15209 634 aa21.92■■□□□ 1.1
GTF2IP1-210ENST00000622829 ISM2Q6H9L7 571 aa21.92■■□□□ 1.1
GTF2IP1-210ENST00000622829 CD109Q6YHK3 1445 aa21.91■■□□□ 1.1
GTF2IP1-210ENST00000622829 NUP62CLQ9H1M0 184 aa21.91■■□□□ 1.1
GTF2IP1-210ENST00000622829 PDRG1Q9NUG6 133 aa21.91■■□□□ 1.1
GTF2IP1-210ENST00000622829 MCM2P49736 904 aa21.91■■□□□ 1.1
GTF2IP1-210ENST00000622829 MYRIPQ8NFW9 859 aa21.91■■□□□ 1.1
GTF2IP1-210ENST00000622829 ANKRD36BQ8N2N9 1353 aa21.91■■□□□ 1.1
GTF2IP1-210ENST00000622829 NRBP1Q9UHY1 535 aa21.9■■□□□ 1.1
GTF2IP1-210ENST00000622829 POLR1AO95602 1720 aaPredicted RBP21.9■■□□□ 1.1
GTF2IP1-210ENST00000622829 CREBRFQ8IUR6 639 aa21.9■■□□□ 1.1
GTF2IP1-210ENST00000622829 ZNF330Q9Y3S2 320 aaPredicted RBP21.9■■□□□ 1.1
GTF2IP1-210ENST00000622829 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
GTF2IP1-210ENST00000622829 CHMLP26374 656 aa21.89■■□□□ 1.1
GTF2IP1-210ENST00000622829 HDGFL1Q5TGJ6 251 aa21.89■■□□□ 1.09
GTF2IP1-210ENST00000622829 DACT1Q9NYF0 836 aa21.88■■□□□ 1.09
GTF2IP1-210ENST00000622829 SHANK2Q9UPX8 1470 aa21.88■■□□□ 1.09
GTF2IP1-210ENST00000622829 BRD1O95696 1058 aa21.88■■□□□ 1.09
GTF2IP1-210ENST00000622829 ZSCAN22P10073 491 aaPredicted RBP21.88■■□□□ 1.09
GTF2IP1-210ENST00000622829 CCDC8Q9H0W5 538 aaPredicted RBP21.88■■□□□ 1.09
GTF2IP1-210ENST00000622829 DNAJC25Q9H1X3 360 aa21.88■■□□□ 1.09
GTF2IP1-210ENST00000622829 IL16Q14005 1332 aa21.88■■□□□ 1.09
GTF2IP1-210ENST00000622829 SF3A1Q15459 793 aaKnown RBP21.88■■□□□ 1.09
GTF2IP1-210ENST00000622829 SPATA32Q96LK8 384 aa21.88■■□□□ 1.09
GTF2IP1-210ENST00000622829 HS1BP3Q53T59 392 aa21.87■■□□□ 1.09
GTF2IP1-210ENST00000622829 ANO6Q4KMQ2 910 aa21.87■■□□□ 1.09
GTF2IP1-210ENST00000622829 CHMP4AQ9BY43 222 aa21.87■■□□□ 1.09
GTF2IP1-210ENST00000622829 ERCC6L2Q5T890 1561 aa21.87■■□□□ 1.09
GTF2IP1-210ENST00000622829 TNNT3P45378 269 aaPredicted RBP21.87■■□□□ 1.09
GTF2IP1-210ENST00000622829 MAP3K11Q16584 847 aa21.87■■□□□ 1.09
GTF2IP1-210ENST00000622829 PIBF1Q8WXW3 757 aa21.87■■□□□ 1.09
GTF2IP1-210ENST00000622829 MCM5P33992 734 aa21.86■■□□□ 1.09
GTF2IP1-210ENST00000622829 CNTROBQ8N137 903 aa21.86■■□□□ 1.09
GTF2IP1-210ENST00000622829 POLR3GO15318 223 aaPredicted RBP21.86■■□□□ 1.09
GTF2IP1-210ENST00000622829 GNAI3P08754 354 aa21.86■■□□□ 1.09
GTF2IP1-210ENST00000622829 PPP1R42Q7Z4L9 355 aa21.86■■□□□ 1.09
GTF2IP1-210ENST00000622829 BOLA2Q9H3K6 86 aa21.86■■□□□ 1.09
GTF2IP1-210ENST00000622829 CYP46A1Q9Y6A2 500 aa21.86■■□□□ 1.09
GTF2IP1-210ENST00000622829 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
GTF2IP1-210ENST00000622829 FLIIQ13045 1269 aa21.86■■□□□ 1.09
GTF2IP1-210ENST00000622829 RAB11FIP3O75154 756 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 KRT85P78386 507 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 SMAP1Q8IYB5 467 aaPredicted RBP21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 ARHGAP45Q92619 1136 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 FSD1Q9BTV5 496 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 PA2G4Q9UQ80 394 aaKnown RBP21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 ADGBQ8N7X0 1667 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 RAB11FIP4Q86YS3 637 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 LIMCH1Q9UPQ0 1083 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 HSP90AA4PQ58FG1 418 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 SDF4Q9BRK5 362 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 CLIP2Q9UDT6 1046 aa21.85■■□□□ 1.09
GTF2IP1-210ENST00000622829 BIN1O00499 593 aa21.84■■□□□ 1.09
GTF2IP1-210ENST00000622829 SMC2O95347 1197 aa21.84■■□□□ 1.09
GTF2IP1-210ENST00000622829 UBE2HP62256 183 aa21.84■■□□□ 1.09
GTF2IP1-210ENST00000622829 RBM33Q96EV2 1170 aaKnown RBP21.84■■□□□ 1.09
GTF2IP1-210ENST00000622829 NUDT16Q96DE0 195 aaKnown RBP21.84■■□□□ 1.09
GTF2IP1-210ENST00000622829 TAF7Q15545 349 aaPredicted RBP21.84■■□□□ 1.09
GTF2IP1-210ENST00000622829 RASEFQ8IZ41 740 aa21.84■■□□□ 1.09
GTF2IP1-210ENST00000622829 CLASRPQ8N2M8 674 aaKnown RBP21.83■■□□□ 1.09
GTF2IP1-210ENST00000622829 NDUFB9Q9Y6M9 179 aa21.83■■□□□ 1.09
GTF2IP1-210ENST00000622829 PDLIM2Q96JY6 352 aa21.83■■□□□ 1.08
GTF2IP1-210ENST00000622829 ZNF165P49910 485 aa21.82■■□□□ 1.08
GTF2IP1-210ENST00000622829 CCT4P50991 539 aaKnown RBP21.82■■□□□ 1.08
GTF2IP1-210ENST00000622829 DNAJC2Q99543 621 aaKnown RBP21.82■■□□□ 1.08
GTF2IP1-210ENST00000622829 ZNF518AQ6AHZ1 1483 aa21.82■■□□□ 1.08
GTF2IP1-210ENST00000622829 PRIMPOLQ96LW4 560 aa21.82■■□□□ 1.08
GTF2IP1-210ENST00000622829 PHAXQ9H814 394 aaKnown RBP21.82■■□□□ 1.08
GTF2IP1-210ENST00000622829 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
GTF2IP1-210ENST00000622829 F13A1P00488 732 aa21.82■■□□□ 1.08
GTF2IP1-210ENST00000622829 ATP10AO60312 1499 aa21.82■■□□□ 1.08
GTF2IP1-210ENST00000622829 AACSQ86V21 672 aa21.81■■□□□ 1.08
GTF2IP1-210ENST00000622829 A0A0G2JS52 829 aa21.81■■□□□ 1.08
GTF2IP1-210ENST00000622829 LARGE1O95461 756 aa21.81■■□□□ 1.08
GTF2IP1-210ENST00000622829 IL25Q9H293 177 aa21.81■■□□□ 1.08
GTF2IP1-210ENST00000622829 LIG1P18858 919 aa21.8■■□□□ 1.08
GTF2IP1-210ENST00000622829 NLRP6P59044 892 aa21.8■■□□□ 1.08
GTF2IP1-210ENST00000622829 TEFQ10587 303 aa21.8■■□□□ 1.08
GTF2IP1-210ENST00000622829 TTLL5Q6EMB2 1281 aa21.8■■□□□ 1.08
GTF2IP1-210ENST00000622829 EIF2AK4Q9P2K8 1649 aaKnown RBP21.8■■□□□ 1.08
GTF2IP1-210ENST00000622829 SAMD9LQ8IVG5 1584 aa21.79■■□□□ 1.08
GTF2IP1-210ENST00000622829 CCDC30Q5VVM6 783 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms