RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 USP26Q9BXU7 913 aa14.79□□□□□ -0.04
TP53-227ENST00000622645 CHD2O14647 1828 aaKnown RBP14.79□□□□□ -0.04
TP53-227ENST00000622645 GNAI3P08754 354 aa14.79□□□□□ -0.04
TP53-227ENST00000622645 TSHZ3Q63HK5 1081 aa14.79□□□□□ -0.04
TP53-227ENST00000622645 BABAM1Q9NWV8 329 aa14.79□□□□□ -0.04
TP53-227ENST00000622645 SETD1BQ9UPS6 1966 aaKnown RBP14.78□□□□□ -0.04
TP53-227ENST00000622645 EIF2S2P20042 333 aaKnown RBP14.78□□□□□ -0.04
TP53-227ENST00000622645 PDE1AP54750 535 aa14.78□□□□□ -0.04
TP53-227ENST00000622645 GZF1Q9H116 711 aaPredicted RBP14.78□□□□□ -0.04
TP53-227ENST00000622645 LRRFIP2Q9Y608 721 aaKnown RBP14.78□□□□□ -0.04
TP53-227ENST00000622645 USP54Q70EL1 1684 aa14.77□□□□□ -0.04
TP53-227ENST00000622645 ADGRL3Q9HAR2 1447 aa14.77□□□□□ -0.04
TP53-227ENST00000622645 KCNQ3O43525 872 aa14.77□□□□□ -0.04
TP53-227ENST00000622645 LMOD2Q6P5Q4 547 aa14.77□□□□□ -0.04
TP53-227ENST00000622645 KCNH5Q8NCM2 988 aa14.77□□□□□ -0.04
TP53-227ENST00000622645 USP44Q9H0E7 712 aa14.77□□□□□ -0.04
TP53-227ENST00000622645 CEMIPQ8WUJ3 1361 aa14.77□□□□□ -0.04
TP53-227ENST00000622645 ATP8B2P98198 1209 aa14.77□□□□□ -0.05
TP53-227ENST00000622645 TNPO1Q92973 898 aaKnown RBP14.77□□□□□ -0.05
TP53-227ENST00000622645 NFAT5O94916 1531 aa14.76□□□□□ -0.05
TP53-227ENST00000622645 LTN1O94822 1766 aa14.76□□□□□ -0.05
TP53-227ENST00000622645 CASC1Q6TDU7 716 aa14.76□□□□□ -0.05
TP53-227ENST00000622645 SOS1Q07889 1333 aaPredicted RBP14.76□□□□□ -0.05
TP53-227ENST00000622645 TRAK2O60296 914 aa14.76□□□□□ -0.05
TP53-227ENST00000622645 GCP02774 474 aa14.76□□□□□ -0.05
TP53-227ENST00000622645 EIF4A1P60842 406 aaKnown RBP14.76□□□□□ -0.05
TP53-227ENST00000622645 MPRIPQ6WCQ1 1025 aa14.76□□□□□ -0.05
TP53-227ENST00000622645 LRRCC1Q9C099 1032 aa14.76□□□□□ -0.05
TP53-227ENST00000622645 OSBPL3Q9H4L5 887 aa14.76□□□□□ -0.05
TP53-227ENST00000622645 FAM208AQ9UK61 1670 aaKnown RBP14.75□□□□□ -0.05
TP53-227ENST00000622645 EIF5BO60841 1220 aaKnown RBP14.74□□□□□ -0.05
TP53-227ENST00000622645 RABEP1Q15276 862 aa14.74□□□□□ -0.05
TP53-227ENST00000622645 ZNF530Q6P9A1 599 aaPredicted RBP14.74□□□□□ -0.05
TP53-227ENST00000622645 ARXQ96QS3 562 aa14.74□□□□□ -0.05
TP53-227ENST00000622645 CIZ1Q9ULV3 898 aaPredicted RBP14.74□□□□□ -0.05
TP53-227ENST00000622645 UBTFL1P0CB47 393 aaPredicted RBP14.74□□□□□ -0.05
TP53-227ENST00000622645 RAB3GAP1Q15042 981 aa14.74□□□□□ -0.05
TP53-227ENST00000622645 CHPF2Q9P2E5 772 aa14.74□□□□□ -0.05
TP53-227ENST00000622645 ANXA1P04083 346 aa14.73□□□□□ -0.05
TP53-227ENST00000622645 TEFQ10587 303 aa14.73□□□□□ -0.05
TP53-227ENST00000622645 ARHGEF25Q86VW2 580 aa14.73□□□□□ -0.05
TP53-227ENST00000622645 SALL3Q9BXA9 1300 aa14.73□□□□□ -0.05
TP53-227ENST00000622645 BTBD11A6QL63 1104 aa14.72□□□□□ -0.05
TP53-227ENST00000622645 MX1P20591 662 aa14.72□□□□□ -0.05
TP53-227ENST00000622645 IBTKQ9P2D0 1353 aaPredicted RBP14.72□□□□□ -0.05
TP53-227ENST00000622645 DDX11L8A8MPP1 907 aa14.72□□□□□ -0.05
TP53-227ENST00000622645 ERC2O15083 957 aa14.72□□□□□ -0.05
TP53-227ENST00000622645 REC8O95072 547 aa14.72□□□□□ -0.05
TP53-227ENST00000622645 AKAP4Q5JQC9 854 aa14.72□□□□□ -0.05
TP53-227ENST00000622645 NPHP4O75161 1426 aaPredicted RBP14.72□□□□□ -0.05
TP53-227ENST00000622645 PLEKHO1Q53GL0 409 aaPredicted RBP14.71□□□□□ -0.05
TP53-227ENST00000622645 SRCIN1Q9C0H9 1055 aa14.71□□□□□ -0.05
TP53-227ENST00000622645 AXIN2Q9Y2T1 843 aa14.71□□□□□ -0.05
TP53-227ENST00000622645 PI4KAP2A4QPH2 592 aa14.71□□□□□ -0.05
TP53-227ENST00000622645 NBPF7P0C2Y1 421 aaPredicted RBP14.71□□□□□ -0.05
TP53-227ENST00000622645 PI4KAP1Q8N8J0 262 aa14.71□□□□□ -0.05
TP53-227ENST00000622645 IL1RAPL2Q9NP60 686 aa14.71□□□□□ -0.05
TP53-227ENST00000622645 ANKRD24Q8TF21 1146 aa14.7□□□□□ -0.06
TP53-227ENST00000622645 PPP1R42Q7Z4L9 355 aa14.7□□□□□ -0.06
TP53-227ENST00000622645 RGPD2P0DJD1 1756 aa14.7□□□□□ -0.06
TP53-227ENST00000622645 SSFA2P28290 1259 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 SSH3Q8TE77 659 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 RILPL2Q969X0 211 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 ZNF142P52746 1687 aaPredicted RBP14.69□□□□□ -0.06
TP53-227ENST00000622645 TRIM6-TRIM34B2RNG4 842 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 C1orf141Q5JVX7 400 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 GBP4Q96PP9 640 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 PXDNLA1KZ92 1463 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 RNMTO43148 476 aaKnown RBP14.69□□□□□ -0.06
TP53-227ENST00000622645 SURF6O75683 361 aaKnown RBP14.69□□□□□ -0.06
TP53-227ENST00000622645 HOXB7P09629 217 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 AMOTQ4VCS5 1084 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 BEND3Q5T5X7 828 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 KRT28Q7Z3Y7 464 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 PROSER2Q86WR7 435 aaPredicted RBP14.69□□□□□ -0.06
TP53-227ENST00000622645 DNAAF4Q8WXU2 420 aa14.69□□□□□ -0.06
TP53-227ENST00000622645 MED1Q15648 1581 aaPredicted RBP14.68□□□□□ -0.06
TP53-227ENST00000622645 CACNA1FO60840 1977 aa14.68□□□□□ -0.06
TP53-227ENST00000622645 UNC5CLQ8IV45 518 aa14.68□□□□□ -0.06
TP53-227ENST00000622645 PXDNQ92626 1479 aa14.68□□□□□ -0.06
TP53-227ENST00000622645 GOLGA6L3A6NEY3 463 aa14.68□□□□□ -0.06
TP53-227ENST00000622645 SRGAP3O43295 1099 aa14.68□□□□□ -0.06
TP53-227ENST00000622645 NUTM1Q86Y26 1132 aa14.68□□□□□ -0.06
TP53-227ENST00000622645 PRAMEF22A3QJZ6 481 aa14.67□□□□□ -0.06
TP53-227ENST00000622645 L1TD1Q5T7N2 865 aaKnown RBP14.67□□□□□ -0.06
TP53-227ENST00000622645 STAP2Q9UGK3 403 aa14.67□□□□□ -0.06
TP53-227ENST00000622645 FSD2A1L4K1 749 aa14.67□□□□□ -0.06
TP53-227ENST00000622645 ST18O60284 1047 aa14.67□□□□□ -0.06
TP53-227ENST00000622645 ZC3H6P61129 1189 aaKnown RBP14.67□□□□□ -0.06
TP53-227ENST00000622645 ESYT1Q9BSJ8 1104 aa14.67□□□□□ -0.06
TP53-227ENST00000622645 CHMLP26374 656 aa14.66□□□□□ -0.06
TP53-227ENST00000622645 PROSER3Q2NL68 480 aa14.66□□□□□ -0.06
TP53-227ENST00000622645 XRCC6P12956 609 aaKnown RBP eCLIP14.66□□□□□ -0.06
TP53-227ENST00000622645 POLA2Q14181 598 aa14.66□□□□□ -0.06
TP53-227ENST00000622645 GIGYF1O75420 1035 aaPredicted RBP14.65□□□□□ -0.06
TP53-227ENST00000622645 RHPN1Q8TCX5 695 aa14.65□□□□□ -0.06
TP53-227ENST00000622645 DBF4Q9UBU7 674 aaPredicted RBP14.65□□□□□ -0.06
TP53-227ENST00000622645 ADCY9O60503 1353 aa14.65□□□□□ -0.06
TP53-227ENST00000622645 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
TP53-227ENST00000622645 PKP1Q13835 747 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms