RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 SSFA2P28290 1259 aa11□□□□□ -0.65
GGA3-222ENST00000621217 GPATCH3Q96I76 525 aa11□□□□□ -0.65
GGA3-222ENST00000621217 MAP3K4Q9Y6R4 1608 aa11□□□□□ -0.65
GGA3-222ENST00000621217 LRRCC1Q9C099 1032 aa10.99□□□□□ -0.65
GGA3-222ENST00000621217 PHAXQ9H814 394 aaKnown RBP10.99□□□□□ -0.65
GGA3-222ENST00000621217 EDC4Q6P2E9 1401 aaKnown RBP10.99□□□□□ -0.65
GGA3-222ENST00000621217 SKOR2Q2VWA4 1001 aaPredicted RBP10.99□□□□□ -0.65
GGA3-222ENST00000621217 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
GGA3-222ENST00000621217 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
GGA3-222ENST00000621217 CCT4P50991 539 aaKnown RBP10.99□□□□□ -0.65
GGA3-222ENST00000621217 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
GGA3-222ENST00000621217 ABCA6Q8N139 1617 aa10.99□□□□□ -0.65
GGA3-222ENST00000621217 GOLGA6L4A6NEF3 574 aa10.98□□□□□ -0.65
GGA3-222ENST00000621217 FOSBP53539 338 aa10.98□□□□□ -0.65
GGA3-222ENST00000621217 ZNF771Q7L3S4 317 aaPredicted RBP10.98□□□□□ -0.65
GGA3-222ENST00000621217 POLR1AO95602 1720 aaPredicted RBP10.98□□□□□ -0.65
GGA3-222ENST00000621217 DIP2CQ9Y2E4 1556 aa10.98□□□□□ -0.65
GGA3-222ENST00000621217 MSH6P52701 1360 aa10.98□□□□□ -0.65
GGA3-222ENST00000621217 RPAP2Q8IXW5 612 aaPredicted RBP10.98□□□□□ -0.65
GGA3-222ENST00000621217 TNPO1Q92973 898 aaKnown RBP10.98□□□□□ -0.65
GGA3-222ENST00000621217 ZMYND15Q9H091 742 aa10.98□□□□□ -0.65
GGA3-222ENST00000621217 MRE11P49959 708 aa10.98□□□□□ -0.65
GGA3-222ENST00000621217 CLASRPQ8N2M8 674 aaKnown RBP10.98□□□□□ -0.65
GGA3-222ENST00000621217 KCNQ3O43525 872 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 CSPP1Q1MSJ5 1256 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 BMP2KLQ5H9B9 411 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 SYAP1Q96A49 352 aaPredicted RBP10.97□□□□□ -0.65
GGA3-222ENST00000621217 HDAC5Q9UQL6 1122 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 INO80Q9ULG1 1556 aaPredicted RBP10.97□□□□□ -0.65
GGA3-222ENST00000621217 DNAJC2Q99543 621 aaKnown RBP10.97□□□□□ -0.65
GGA3-222ENST00000621217 MYD88Q99836 296 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 PANK2Q9BZ23 570 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 TOMM22Q9NS69 142 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 NPHP3Q7Z494 1330 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 ERC2O15083 957 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 SDSP20132 328 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 DRC7Q8IY82 874 aa10.97□□□□□ -0.65
GGA3-222ENST00000621217 HSP90B1P14625 803 aaKnown RBP10.96□□□□□ -0.65
GGA3-222ENST00000621217 CWC27Q6UX04 472 aaKnown RBP10.96□□□□□ -0.65
GGA3-222ENST00000621217 VPS37CA5D8V6 355 aaPredicted RBP10.96□□□□□ -0.66
GGA3-222ENST00000621217 RABEP1Q15276 862 aa10.96□□□□□ -0.66
GGA3-222ENST00000621217 AMOTQ4VCS5 1084 aa10.96□□□□□ -0.66
GGA3-222ENST00000621217 IP6K1Q92551 441 aa10.96□□□□□ -0.66
GGA3-222ENST00000621217 MAP3K2Q9Y2U5 619 aa10.96□□□□□ -0.66
GGA3-222ENST00000621217 GPTP24298 496 aa10.95□□□□□ -0.66
GGA3-222ENST00000621217 BICDL1Q6ZP65 573 aa10.95□□□□□ -0.66
GGA3-222ENST00000621217 ACSBG1Q96GR2 724 aa10.95□□□□□ -0.66
GGA3-222ENST00000621217 DNAAF4Q8WXU2 420 aa10.95□□□□□ -0.66
GGA3-222ENST00000621217 ARHGAP31Q2M1Z3 1444 aa10.95□□□□□ -0.66
GGA3-222ENST00000621217 CWF19L2Q2TBE0 894 aaKnown RBP10.95□□□□□ -0.66
GGA3-222ENST00000621217 MX1P20591 662 aa10.94□□□□□ -0.66
GGA3-222ENST00000621217 IFNL2Q8IZJ0 200 aa10.94□□□□□ -0.66
GGA3-222ENST00000621217 NGLY1Q96IV0 654 aa10.94□□□□□ -0.66
GGA3-222ENST00000621217 CCDC8Q9H0W5 538 aaPredicted RBP10.94□□□□□ -0.66
GGA3-222ENST00000621217 TTC22Q5TAA0 569 aa10.94□□□□□ -0.66
GGA3-222ENST00000621217 IL17REQ8NFR9 667 aa10.94□□□□□ -0.66
GGA3-222ENST00000621217 PLEKHG1Q9ULL1 1385 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 NUCB2P80303 420 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 AACSQ86V21 672 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 PLEKHM2Q8IWE5 1019 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 GDPD2Q9HCC8 539 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 TMOD3Q9NYL9 352 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 DBF4Q9UBU7 674 aaPredicted RBP10.93□□□□□ -0.66
GGA3-222ENST00000621217 CEP85Q6P2H3 762 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 COPS6Q7L5N1 327 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 ISY1Q9ULR0 285 aaKnown RBP10.93□□□□□ -0.66
GGA3-222ENST00000621217 GLI2P10070 1586 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 TMEM94Q12767 1356 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 KDM4AO75164 1064 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
GGA3-222ENST00000621217 APPP05067 770 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 UBE3BQ7Z3V4 1068 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 PPP1R42Q7Z4L9 355 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 ANKRD44Q8N8A2 993 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 ARHGAP45Q92619 1136 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 ZFYVE9O95405 1425 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 GRPEL1Q9HAV7 217 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 ALKQ9UM73 1620 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 CLTCQ00610 1675 aaKnown RBP10.92□□□□□ -0.66
GGA3-222ENST00000621217 ADGRB3O60242 1522 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 NASPP49321 788 aaPredicted RBP10.92□□□□□ -0.66
GGA3-222ENST00000621217 XAGE3Q8WTP9 111 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 SLAIN2Q9P270 581 aa10.92□□□□□ -0.66
GGA3-222ENST00000621217 PA2G4Q9UQ80 394 aaKnown RBP10.92□□□□□ -0.66
GGA3-222ENST00000621217 BTG4Q9NY30 223 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 R3HCC1Q9Y3T6 440 aaKnown RBP10.91□□□□□ -0.66
GGA3-222ENST00000621217 USP19O94966 1318 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 ZNF335Q9H4Z2 1342 aaPredicted RBP10.91□□□□□ -0.66
GGA3-222ENST00000621217 A0A087WZG4 1122 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 UBAP1LF5GYI3 381 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 NLRP1Q9C000 1473 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 CHL1O00533 1208 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 FIBPO43427 364 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 STK3Q13188 491 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 BOLA2Q9H3K6 86 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 SBNO1A3KN83 1393 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 WASHC4Q2M389 1173 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
GGA3-222ENST00000621217 CHAMP1Q96JM3 812 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms