RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
VTA1-205ENST00000620996 FLIIQ13045 1269 aa12.47□□□□□ -0.41
VTA1-205ENST00000620996 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
VTA1-205ENST00000620996 STRCQ7RTU9 1775 aa12.46□□□□□ -0.41
VTA1-205ENST00000620996 PXDNQ92626 1479 aa12.46□□□□□ -0.41
VTA1-205ENST00000620996 ANXA1P04083 346 aa12.46□□□□□ -0.42
VTA1-205ENST00000620996 USP35Q9P2H5 1018 aa12.46□□□□□ -0.42
VTA1-205ENST00000620996 IPO9Q96P70 1041 aaKnown RBP12.45□□□□□ -0.42
VTA1-205ENST00000620996 MEIS3Q99687 375 aa12.45□□□□□ -0.42
VTA1-205ENST00000620996 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
VTA1-205ENST00000620996 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
VTA1-205ENST00000620996 EVA1CP58658 441 aa12.45□□□□□ -0.42
VTA1-205ENST00000620996 INTS3Q68E01 1043 aaKnown RBP12.44□□□□□ -0.42
VTA1-205ENST00000620996 NOP58Q9Y2X3 529 aaKnown RBP12.44□□□□□ -0.42
VTA1-205ENST00000620996 EIF4A1P60842 406 aaKnown RBP12.44□□□□□ -0.42
VTA1-205ENST00000620996 PHAXQ9H814 394 aaKnown RBP12.44□□□□□ -0.42
VTA1-205ENST00000620996 ALS2Q96Q42 1657 aa12.44□□□□□ -0.42
VTA1-205ENST00000620996 SLC39A6Q13433 755 aa12.43□□□□□ -0.42
VTA1-205ENST00000620996 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
VTA1-205ENST00000620996 DAXXQ9UER7 740 aaPredicted RBP12.43□□□□□ -0.42
VTA1-205ENST00000620996 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
VTA1-205ENST00000620996 SMC5Q8IY18 1101 aa12.43□□□□□ -0.42
VTA1-205ENST00000620996 CCT4P50991 539 aaKnown RBP12.43□□□□□ -0.42
VTA1-205ENST00000620996 CHD1LQ86WJ1 897 aa12.43□□□□□ -0.42
VTA1-205ENST00000620996 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
VTA1-205ENST00000620996 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
VTA1-205ENST00000620996 SIRT2Q8IXJ6 389 aa12.42□□□□□ -0.42
VTA1-205ENST00000620996 PRAMEF22A3QJZ6 481 aa12.41□□□□□ -0.42
VTA1-205ENST00000620996 NUCB1Q02818 461 aa12.41□□□□□ -0.42
VTA1-205ENST00000620996 NFATC2IPQ8NCF5 419 aa12.41□□□□□ -0.42
VTA1-205ENST00000620996 GCC1Q96CN9 775 aa12.41□□□□□ -0.42
VTA1-205ENST00000620996 RGS12O14924 1447 aa12.41□□□□□ -0.42
VTA1-205ENST00000620996 XIRP1Q702N8 1843 aaKnown RBP12.41□□□□□ -0.42
VTA1-205ENST00000620996 IFNL2Q8IZJ0 200 aa12.41□□□□□ -0.42
VTA1-205ENST00000620996 UPF2Q9HAU5 1272 aaKnown RBP12.41□□□□□ -0.42
VTA1-205ENST00000620996 SOS2Q07890 1332 aaPredicted RBP12.4□□□□□ -0.42
VTA1-205ENST00000620996 SEC24BO95487 1268 aa12.4□□□□□ -0.42
VTA1-205ENST00000620996 PHKG2P15735 406 aa12.4□□□□□ -0.42
VTA1-205ENST00000620996 DDX54Q8TDD1 881 aaKnown RBP12.4□□□□□ -0.42
VTA1-205ENST00000620996 AIMP1Q12904 312 aaKnown RBP12.4□□□□□ -0.42
VTA1-205ENST00000620996 MEGF6O75095 1541 aa12.4□□□□□ -0.42
VTA1-205ENST00000620996 TTC5Q8N0Z6 440 aa12.4□□□□□ -0.43
VTA1-205ENST00000620996 LRRC37A3O60309 1634 aa12.4□□□□□ -0.43
VTA1-205ENST00000620996 PHRF1Q9P1Y6 1649 aaKnown RBP12.4□□□□□ -0.43
VTA1-205ENST00000620996 A0A0U1RQG5 324 aaPredicted RBP12.39□□□□□ -0.43
VTA1-205ENST00000620996 SLC4A3P48751 1232 aa12.39□□□□□ -0.43
VTA1-205ENST00000620996 CEP85Q6P2H3 762 aa12.39□□□□□ -0.43
VTA1-205ENST00000620996 GNAI2P04899 355 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
VTA1-205ENST00000620996 CABP4P57796 275 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 ANKRD44Q8N8A2 993 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 SMARCA5O60264 1052 aaPredicted RBP12.38□□□□□ -0.43
VTA1-205ENST00000620996 HMMRO75330 724 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 MYL6BP14649 208 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 NCAPD2Q15021 1401 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 LARP1Q6PKG0 1096 aaKnown RBP12.38□□□□□ -0.43
VTA1-205ENST00000620996 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
VTA1-205ENST00000620996 CYP27B1O15528 508 aa12.37□□□□□ -0.43
VTA1-205ENST00000620996 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
VTA1-205ENST00000620996 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
VTA1-205ENST00000620996 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
VTA1-205ENST00000620996 CHMP4AQ9BY43 222 aa12.37□□□□□ -0.43
VTA1-205ENST00000620996 CPDO75976 1380 aa12.37□□□□□ -0.43
VTA1-205ENST00000620996 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
VTA1-205ENST00000620996 GIGYF1O75420 1035 aaPredicted RBP12.36□□□□□ -0.43
VTA1-205ENST00000620996 GNAI3P08754 354 aa12.36□□□□□ -0.43
VTA1-205ENST00000620996 UBTFL1P0CB47 393 aaPredicted RBP12.36□□□□□ -0.43
VTA1-205ENST00000620996 PIP4K2AP48426 406 aaPredicted RBP12.36□□□□□ -0.43
VTA1-205ENST00000620996 PIP4K2BP78356 416 aa12.36□□□□□ -0.43
VTA1-205ENST00000620996 PROSER3Q2NL68 480 aa12.36□□□□□ -0.43
VTA1-205ENST00000620996 SRCIN1Q9C0H9 1055 aa12.36□□□□□ -0.43
VTA1-205ENST00000620996 DBF4Q9UBU7 674 aaPredicted RBP12.36□□□□□ -0.43
VTA1-205ENST00000620996 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
VTA1-205ENST00000620996 A0A0G2JS52 829 aa12.36□□□□□ -0.43
VTA1-205ENST00000620996 ZNF790Q6PG37 636 aa12.36□□□□□ -0.43
VTA1-205ENST00000620996 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
VTA1-205ENST00000620996 EXOC6BQ9Y2D4 811 aa12.36□□□□□ -0.43
VTA1-205ENST00000620996 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
VTA1-205ENST00000620996 DCAF5Q96JK2 942 aa12.35□□□□□ -0.43
VTA1-205ENST00000620996 BTG4Q9NY30 223 aa12.35□□□□□ -0.43
VTA1-205ENST00000620996 HOXB7P09629 217 aa12.35□□□□□ -0.43
VTA1-205ENST00000620996 C16orf71Q8IYS4 520 aaPredicted RBP12.35□□□□□ -0.43
VTA1-205ENST00000620996 LMO7Q8WWI1 1683 aa12.35□□□□□ -0.43
VTA1-205ENST00000620996 HSP90AB1P08238 724 aaKnown RBP12.35□□□□□ -0.43
VTA1-205ENST00000620996 DCTPP1Q9H773 170 aa12.35□□□□□ -0.43
VTA1-205ENST00000620996 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
VTA1-205ENST00000620996 IL2RBP14784 551 aa12.34□□□□□ -0.43
VTA1-205ENST00000620996 MAP3K2Q9Y2U5 619 aa12.34□□□□□ -0.43
VTA1-205ENST00000620996 ADAMTS2O95450 1211 aa12.34□□□□□ -0.43
VTA1-205ENST00000620996 ZNF496Q96IT1 587 aaPredicted RBP12.34□□□□□ -0.43
VTA1-205ENST00000620996 ATP10DQ9P241 1426 aa12.33□□□□□ -0.43
VTA1-205ENST00000620996 FAM208AQ9UK61 1670 aaKnown RBP12.33□□□□□ -0.44
VTA1-205ENST00000620996 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
VTA1-205ENST00000620996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■□□□□ 10.8
VTA1-205ENST00000620996 C9orf78Q9NZ63 289 aaPredicted RBP12.33□□□□□ -0.44
VTA1-205ENST00000620996 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
VTA1-205ENST00000620996 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms