RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SLC4A10Q6U841 1118 aa23.84■■□□□ 1.41
PDLIM3-212ENST00000620787 EXOC6BQ9Y2D4 811 aa23.84■■□□□ 1.41
PDLIM3-212ENST00000620787 TECPR2O15040 1411 aa23.83■■□□□ 1.41
PDLIM3-212ENST00000620787 RIMS1Q86UR5 1692 aaKnown RBP23.83■■□□□ 1.41
PDLIM3-212ENST00000620787 MIS18AQ9NYP9 233 aa23.83■■□□□ 1.41
PDLIM3-212ENST00000620787 OVOS2A0A0J9YW53 1432 aa23.83■■□□□ 1.41
PDLIM3-212ENST00000620787 OVOS2Q6IE36 1432 aa23.83■■□□□ 1.41
PDLIM3-212ENST00000620787 INTS4Q96HW7 963 aaKnown RBP23.83■■□□□ 1.4
PDLIM3-212ENST00000620787 ANAPC15P60006 121 aa23.82■■□□□ 1.4
PDLIM3-212ENST00000620787 XRN1Q8IZH2 1706 aaKnown RBP23.82■■□□□ 1.4
PDLIM3-212ENST00000620787 GNAI2P04899 355 aa23.81■■□□□ 1.4
PDLIM3-212ENST00000620787 RBM10P98175 930 aaKnown RBP23.81■■□□□ 1.4
PDLIM3-212ENST00000620787 SSH2Q76I76 1423 aa23.81■■□□□ 1.4
PDLIM3-212ENST00000620787 MCCP23508 829 aa23.81■■□□□ 1.4
PDLIM3-212ENST00000620787 CSPP1Q1MSJ5 1256 aa23.81■■□□□ 1.4
PDLIM3-212ENST00000620787 RNF214Q8ND24 703 aa23.81■■□□□ 1.4
PDLIM3-212ENST00000620787 IL17RAQ96F46 866 aa23.81■■□□□ 1.4
PDLIM3-212ENST00000620787 FMN2Q9NZ56 1722 aa23.81■■□□□ 1.4
PDLIM3-212ENST00000620787 TTC21BQ7Z4L5 1316 aa23.8■■□□□ 1.4
PDLIM3-212ENST00000620787 MX1P20591 662 aa23.8■■□□□ 1.4
PDLIM3-212ENST00000620787 CHMLP26374 656 aa23.8■■□□□ 1.4
PDLIM3-212ENST00000620787 TOPAZ1Q8N9V7 1692 aa23.8■■□□□ 1.4
PDLIM3-212ENST00000620787 FAM208AQ9UK61 1670 aaKnown RBP23.8■■□□□ 1.4
PDLIM3-212ENST00000620787 TCHHQ07283 1943 aa23.8■■□□□ 1.4
PDLIM3-212ENST00000620787 HSP90AB2PQ58FF8 381 aa23.8■■□□□ 1.4
PDLIM3-212ENST00000620787 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
PDLIM3-212ENST00000620787 LRRCC1Q9C099 1032 aa23.8■■□□□ 1.4
PDLIM3-212ENST00000620787 TSPY26PQ9H489 355 aa23.79■■□□□ 1.4
PDLIM3-212ENST00000620787 N4BP2Q86UW6 1770 aaPredicted RBP23.79■■□□□ 1.4
PDLIM3-212ENST00000620787 AGLP35573 1532 aa23.79■■□□□ 1.4
PDLIM3-212ENST00000620787 UQCRHLA0A096LP55 91 aa23.79■■□□□ 1.4
PDLIM3-212ENST00000620787 UQCRHP07919 91 aa23.79■■□□□ 1.4
PDLIM3-212ENST00000620787 NOL8Q76FK4 1167 aaKnown RBP23.78■■□□□ 1.4
PDLIM3-212ENST00000620787 ANO2Q9NQ90 1003 aa23.78■■□□□ 1.4
PDLIM3-212ENST00000620787 TSPYL4Q9UJ04 414 aa23.78■■□□□ 1.4
PDLIM3-212ENST00000620787 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
PDLIM3-212ENST00000620787 PPP6R1Q9UPN7 881 aa23.77■■□□□ 1.4
PDLIM3-212ENST00000620787 FOXO3O43524 673 aa23.77■■□□□ 1.4
PDLIM3-212ENST00000620787 PNMA6EA0A0J9YXQ4 647 aa23.76■■□□□ 1.39
PDLIM3-212ENST00000620787 STAP2Q9UGK3 403 aa23.76■■□□□ 1.39
PDLIM3-212ENST00000620787 RILPL2Q969X0 211 aa23.76■■□□□ 1.39
PDLIM3-212ENST00000620787 SYAP1Q96A49 352 aaPredicted RBP23.76■■□□□ 1.39
PDLIM3-212ENST00000620787 MAP3K19Q56UN5 1328 aa23.75■■□□□ 1.39
PDLIM3-212ENST00000620787 TRIM6-TRIM34B2RNG4 842 aa23.74■■□□□ 1.39
PDLIM3-212ENST00000620787 ATP8B2P98198 1209 aa23.74■■□□□ 1.39
PDLIM3-212ENST00000620787 MTHFSDQ2M296 383 aaKnown RBP23.74■■□□□ 1.39
PDLIM3-212ENST00000620787 MAP7D2Q96T17 732 aa23.74■■□□□ 1.39
PDLIM3-212ENST00000620787 FAM13BQ9NYF5 915 aa23.74■■□□□ 1.39
PDLIM3-212ENST00000620787 USP31Q70CQ4 1352 aa23.74■■□□□ 1.39
PDLIM3-212ENST00000620787 GADD45BO75293 160 aaPredicted RBP23.74■■□□□ 1.39
PDLIM3-212ENST00000620787 CACNA1FO60840 1977 aa23.74■■□□□ 1.39
PDLIM3-212ENST00000620787 UNC5CLQ8IV45 518 aa23.73■■□□□ 1.39
PDLIM3-212ENST00000620787 UPF3BQ9BZI7 483 aaKnown RBP23.73■■□□□ 1.39
PDLIM3-212ENST00000620787 LRRC37A3O60309 1634 aa23.73■■□□□ 1.39
PDLIM3-212ENST00000620787 GNAI3P08754 354 aa23.73■■□□□ 1.39
PDLIM3-212ENST00000620787 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.73■■□□□ 1.39
PDLIM3-212ENST00000620787 ACEP12821 1306 aa23.73■■□□□ 1.39
PDLIM3-212ENST00000620787 SASS6Q6UVJ0 657 aa23.72■■□□□ 1.39
PDLIM3-212ENST00000620787 RTF1Q92541 710 aaKnown RBP23.72■■□□□ 1.39
PDLIM3-212ENST00000620787 GDPD2Q9HCC8 539 aa23.72■■□□□ 1.39
PDLIM3-212ENST00000620787 USP6P35125 1406 aa23.71■■□□□ 1.39
PDLIM3-212ENST00000620787 DYNC1I1O14576 645 aa23.71■■□□□ 1.39
PDLIM3-212ENST00000620787 USP48Q86UV5 1035 aa23.71■■□□□ 1.39
PDLIM3-212ENST00000620787 SRCIN1Q9C0H9 1055 aa23.71■■□□□ 1.39
PDLIM3-212ENST00000620787 IL25Q9H293 177 aa23.71■■□□□ 1.39
PDLIM3-212ENST00000620787 FLIIQ13045 1269 aa23.71■■□□□ 1.39
PDLIM3-212ENST00000620787 STK31Q9BXU1 1019 aa23.71■■□□□ 1.39
PDLIM3-212ENST00000620787 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.71■■□□□ 1.39
PDLIM3-212ENST00000620787 WDR33Q9C0J8 1336 aaKnown RBP23.71■■□□□ 1.39
PDLIM3-212ENST00000620787 PHF14O94880 888 aa23.7■■□□□ 1.38
PDLIM3-212ENST00000620787 FOXD4L6Q3SYB3 417 aaPredicted RBP23.7■■□□□ 1.38
PDLIM3-212ENST00000620787 FOXD4L3Q6VB84 417 aaPredicted RBP23.7■■□□□ 1.38
PDLIM3-212ENST00000620787 AOX1Q06278 1338 aa23.7■■□□□ 1.38
PDLIM3-212ENST00000620787 ROBO2Q9HCK4 1378 aa23.7■■□□□ 1.38
PDLIM3-212ENST00000620787 RPAP1Q9BWH6 1393 aaPredicted RBP23.7■■□□□ 1.38
PDLIM3-212ENST00000620787 PLEKHG5O94827 1062 aa23.69■■□□□ 1.38
PDLIM3-212ENST00000620787 PTMAP06454 111 aaKnown RBP23.69■■□□□ 1.38
PDLIM3-212ENST00000620787 EPB41L2O43491 1005 aaKnown RBP23.69■■□□□ 1.38
PDLIM3-212ENST00000620787 KDRP35968 1356 aa23.69■■□□□ 1.38
PDLIM3-212ENST00000620787 HSPA4P34932 840 aa23.68■■□□□ 1.38
PDLIM3-212ENST00000620787 FKBP5Q13451 457 aaPredicted RBP23.68■■□□□ 1.38
PDLIM3-212ENST00000620787 TMEM87AQ8NBN3 555 aa23.68■■□□□ 1.38
PDLIM3-212ENST00000620787 PLEKHG3A1L390 1219 aa23.67■■□□□ 1.38
PDLIM3-212ENST00000620787 KIAA2012Q0VF49 1180 aa23.67■■□□□ 1.38
PDLIM3-212ENST00000620787 LRRFIP2Q9Y608 721 aaKnown RBP23.67■■□□□ 1.38
PDLIM3-212ENST00000620787 CEP170BQ9Y4F5 1589 aaPredicted RBP23.67■■□□□ 1.38
PDLIM3-212ENST00000620787 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
PDLIM3-212ENST00000620787 SOX12O15370 315 aa23.66■■□□□ 1.38
PDLIM3-212ENST00000620787 UVSSAQ2YD98 709 aa23.66■■□□□ 1.38
PDLIM3-212ENST00000620787 FAM184AQ8NB25 1140 aa23.66■■□□□ 1.38
PDLIM3-212ENST00000620787 CCDC30Q5VVM6 783 aa23.65■■□□□ 1.38
PDLIM3-212ENST00000620787 PXDNLA1KZ92 1463 aa23.65■■□□□ 1.38
PDLIM3-212ENST00000620787 CCDC183Q5T5S1 534 aa23.63■■□□□ 1.37
PDLIM3-212ENST00000620787 SOS1Q07889 1333 aaPredicted RBP23.63■■□□□ 1.37
PDLIM3-212ENST00000620787 MTERF4Q7Z6M4 381 aaKnown RBP23.63■■□□□ 1.37
PDLIM3-212ENST00000620787 IL1RAPL2Q9NP60 686 aa23.63■■□□□ 1.37
PDLIM3-212ENST00000620787 SBNO1A3KN83 1393 aa23.63■■□□□ 1.37
PDLIM3-212ENST00000620787 FLT4P35916 1363 aa23.63■■□□□ 1.37
PDLIM3-212ENST00000620787 NECTIN2Q92692 538 aa23.62■■□□□ 1.37
PDLIM3-212ENST00000620787 USP44Q9H0E7 712 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms