RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 FAM83GA6ND36 823 aa9.13□□□□□ -0.95
BRCC3-209ENST00000620502 BHMG1C9JSJ3 638 aaPredicted RBP9.13□□□□□ -0.95
BRCC3-209ENST00000620502 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
BRCC3-209ENST00000620502 TMF1P82094 1093 aa9.13□□□□□ -0.95
BRCC3-209ENST00000620502 ABTB2Q8N961 1025 aa9.13□□□□□ -0.95
BRCC3-209ENST00000620502 TMC1Q8TDI8 760 aa9.13□□□□□ -0.95
BRCC3-209ENST00000620502 SLIT2O94813 1529 aa9.13□□□□□ -0.95
BRCC3-209ENST00000620502 PIK3C2AO00443 1686 aa9.13□□□□□ -0.95
BRCC3-209ENST00000620502 PLCH1Q4KWH8 1693 aa9.13□□□□□ -0.95
BRCC3-209ENST00000620502 KTN1Q86UP2 1357 aaKnown RBP9.12□□□□□ -0.95
BRCC3-209ENST00000620502 TTC21BQ7Z4L5 1316 aa9.12□□□□□ -0.95
BRCC3-209ENST00000620502 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
BRCC3-209ENST00000620502 HSPA5P11021 654 aaKnown RBP9.12□□□□□ -0.95
BRCC3-209ENST00000620502 PRSS12P56730 875 aa9.12□□□□□ -0.95
BRCC3-209ENST00000620502 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
BRCC3-209ENST00000620502 QTRT2Q9H974 415 aaKnown RBP9.12□□□□□ -0.95
BRCC3-209ENST00000620502 RABGEF1Q9UJ41 708 aa9.12□□□□□ -0.95
BRCC3-209ENST00000620502 USP21Q9UK80 565 aa9.12□□□□□ -0.95
BRCC3-209ENST00000620502 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.11□□□□□ -0.95
BRCC3-209ENST00000620502 NWD2Q9ULI1 1742 aa9.11□□□□□ -0.95
BRCC3-209ENST00000620502 USP19O94966 1318 aa9.11□□□□□ -0.95
BRCC3-209ENST00000620502 NLRP13Q86W25 1043 aa9.11□□□□□ -0.95
BRCC3-209ENST00000620502 CDCA7LQ96GN5 454 aa9.11□□□□□ -0.95
BRCC3-209ENST00000620502 TSKSQ9UJT2 592 aa9.11□□□□□ -0.95
BRCC3-209ENST00000620502 COL14A1Q05707 1796 aaKnown RBP9.11□□□□□ -0.95
BRCC3-209ENST00000620502 A0A1W2PP64 1363 aa9.11□□□□□ -0.95
BRCC3-209ENST00000620502 NINLQ9Y2I6 1382 aa9.11□□□□□ -0.95
BRCC3-209ENST00000620502 MYOM1P52179 1685 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 TTC21AQ8NDW8 1320 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 TULP1O00294 542 aaPredicted RBP9.1□□□□□ -0.95
BRCC3-209ENST00000620502 GCP02774 474 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 RXRBP28702 533 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.1□□□□□ -0.95
BRCC3-209ENST00000620502 TTC13Q8NBP0 860 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 TERF2IPQ9NYB0 399 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 KIAA1468Q9P260 1216 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 RBM27Q9P2N5 1060 aaKnown RBP9.1□□□□□ -0.95
BRCC3-209ENST00000620502 FAM198AQ9UFP1 575 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 ATRNO75882 1429 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 SLIT3O75094 1523 aa9.1□□□□□ -0.95
BRCC3-209ENST00000620502 NRAPQ86VF7 1730 aa9.09□□□□□ -0.95
BRCC3-209ENST00000620502 C11orf95C9JLR9 678 aaPredicted RBP9.09□□□□□ -0.95
BRCC3-209ENST00000620502 GPR37O15354 613 aa9.09□□□□□ -0.95
BRCC3-209ENST00000620502 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.95
BRCC3-209ENST00000620502 CDCA8Q53HL2 280 aa9.09□□□□□ -0.95
BRCC3-209ENST00000620502 HDGFL2Q7Z4V5 671 aaPredicted RBP9.09□□□□□ -0.95
BRCC3-209ENST00000620502 UNC5CLQ8IV45 518 aa9.09□□□□□ -0.95
BRCC3-209ENST00000620502 TRPC5Q9UL62 973 aaPredicted RBP9.09□□□□□ -0.95
BRCC3-209ENST00000620502 USP54Q70EL1 1684 aa9.09□□□□□ -0.95
BRCC3-209ENST00000620502 KIAA0232Q92628 1395 aa9.09□□□□□ -0.95
BRCC3-209ENST00000620502 EDC4Q6P2E9 1401 aaKnown RBP9.08□□□□□ -0.96
BRCC3-209ENST00000620502 SOCS7O14512 581 aa9.08□□□□□ -0.96
BRCC3-209ENST00000620502 FCHSD2O94868 740 aa9.08□□□□□ -0.96
BRCC3-209ENST00000620502 RBM6P78332 1123 aaKnown RBP9.08□□□□□ -0.96
BRCC3-209ENST00000620502 NME9Q86XW9 330 aa9.08□□□□□ -0.96
BRCC3-209ENST00000620502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.08□□□□□ -0.96
BRCC3-209ENST00000620502 BTG4Q9NY30 223 aa9.08□□□□□ -0.96
BRCC3-209ENST00000620502 CPDO75976 1380 aa9.08□□□□□ -0.96
BRCC3-209ENST00000620502 USP31Q70CQ4 1352 aa9.08□□□□□ -0.96
BRCC3-209ENST00000620502 ANKRD36BQ8N2N9 1353 aa9.08□□□□□ -0.96
BRCC3-209ENST00000620502 CDK12Q9NYV4 1490 aaPredicted RBP9.08□□□□□ -0.96
BRCC3-209ENST00000620502 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
BRCC3-209ENST00000620502 COL18A1P39060 1754 aa9.07□□□□□ -0.96
BRCC3-209ENST00000620502 CHRNA2Q15822 529 aa9.07□□□□□ -0.96
BRCC3-209ENST00000620502 VPS72Q15906 364 aa9.07□□□□□ -0.96
BRCC3-209ENST00000620502 PADI6Q6TGC4 694 aa9.07□□□□□ -0.96
BRCC3-209ENST00000620502 GJD4Q96KN9 370 aaPredicted RBP9.07□□□□□ -0.96
BRCC3-209ENST00000620502 PRDM11Q9NQV5 511 aa9.07□□□□□ -0.96
BRCC3-209ENST00000620502 GLI3P10071 1580 aa9.07□□□□□ -0.96
BRCC3-209ENST00000620502 CAMTA1Q9Y6Y1 1673 aa9.07□□□□□ -0.96
BRCC3-209ENST00000620502 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
BRCC3-209ENST00000620502 GPIHBP1Q8IV16 184 aa9.06□□□□□ -0.96
BRCC3-209ENST00000620502 CARD14Q9BXL6 1004 aa9.06□□□□□ -0.96
BRCC3-209ENST00000620502 NBPF3Q9H094 633 aa9.06□□□□□ -0.96
BRCC3-209ENST00000620502 RGS12O14924 1447 aa9.05□□□□□ -0.96
BRCC3-209ENST00000620502 NFAT5O94916 1531 aa9.05□□□□□ -0.96
BRCC3-209ENST00000620502 C3orf80F5H4A9 247 aa9.05□□□□□ -0.96
BRCC3-209ENST00000620502 ARHGEF25Q86VW2 580 aa9.05□□□□□ -0.96
BRCC3-209ENST00000620502 KCNH5Q8NCM2 988 aa9.05□□□□□ -0.96
BRCC3-209ENST00000620502 OVOS2A0A0J9YW53 1432 aa9.05□□□□□ -0.96
BRCC3-209ENST00000620502 OVOS2Q6IE36 1432 aa9.05□□□□□ -0.96
BRCC3-209ENST00000620502 RGPD5Q99666 1765 aa9.04□□□□□ -0.96
BRCC3-209ENST00000620502 AATKQ6ZMQ8 1374 aa9.04□□□□□ -0.96
BRCC3-209ENST00000620502 FYB1O15117 783 aa9.04□□□□□ -0.96
BRCC3-209ENST00000620502 HIC1Q14526 733 aa9.04□□□□□ -0.96
BRCC3-209ENST00000620502 MRPL50Q8N5N7 158 aaKnown RBP9.04□□□□□ -0.96
BRCC3-209ENST00000620502 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
BRCC3-209ENST00000620502 LTN1O94822 1766 aa9.03□□□□□ -0.96
BRCC3-209ENST00000620502 BRWD3Q6RI45 1802 aa9.03□□□□□ -0.96
BRCC3-209ENST00000620502 KIF20BQ96Q89 1820 aa9.03□□□□□ -0.96
BRCC3-209ENST00000620502 SPATA31A5Q5VU36 1347 aa9.03□□□□□ -0.96
BRCC3-209ENST00000620502 SPATA31A7Q8IWB4 1347 aa9.03□□□□□ -0.96
BRCC3-209ENST00000620502 GNPATO15228 680 aa9.02□□□□□ -0.97
BRCC3-209ENST00000620502 FECHP22830 423 aa9.02□□□□□ -0.97
BRCC3-209ENST00000620502 TATDN2Q93075 761 aa9.02□□□□□ -0.97
BRCC3-209ENST00000620502 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
BRCC3-209ENST00000620502 POLR3GLQ9BT43 218 aa9.02□□□□□ -0.97
BRCC3-209ENST00000620502 STRN4Q9NRL3 753 aa9.02□□□□□ -0.97
BRCC3-209ENST00000620502 SEPT9Q9UHD8 586 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms