RNA–Protein interactions for RNA: ENST00000619580.4

PTMS-207, Transcript of parathymosin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTMS, Length 1,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-207ENST00000619580 HMGB2P26583 209 aaKnown RBP27.72■■■□□ 2.03
PTMS-207ENST00000619580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.72■■■□□ 2.032e-9■□□□□ 10.7
PTMS-207ENST00000619580 SPG7Q9UQ90 795 aa27.72■■■□□ 2.03
PTMS-207ENST00000619580 PALLDQ8WX93 1383 aa27.72■■■□□ 2.03
PTMS-207ENST00000619580 ITGB4P16144 1822 aa27.71■■■□□ 2.03
PTMS-207ENST00000619580 MPRIPQ6WCQ1 1025 aa27.71■■■□□ 2.03
PTMS-207ENST00000619580 HTRA3P83110 453 aa27.7■■■□□ 2.02
PTMS-207ENST00000619580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.69■■■□□ 2.02
PTMS-207ENST00000619580 CC2D1BQ5T0F9 858 aaKnown RBP27.69■■■□□ 2.02
PTMS-207ENST00000619580 NMRK2Q9NPI5 230 aa27.69■■■□□ 2.02
PTMS-207ENST00000619580 NKX1-1Q15270 411 aaPredicted RBP27.66■■■□□ 2.02
PTMS-207ENST00000619580 KLRG1Q96E93 195 aa27.65■■■□□ 2.02
PTMS-207ENST00000619580 MTHFSP49914 203 aa27.64■■■□□ 2.02
PTMS-207ENST00000619580 TNS4Q8IZW8 715 aa27.64■■■□□ 2.02
PTMS-207ENST00000619580 IL13P35225 146 aa27.63■■■□□ 2.01
PTMS-207ENST00000619580 ARHGAP27Q6ZUM4 889 aa27.63■■■□□ 2.01
PTMS-207ENST00000619580 BCS1LQ9Y276 419 aa27.63■■■□□ 2.01
PTMS-207ENST00000619580 C4BP0C0L5 1744 aa27.63■■■□□ 2.01
PTMS-207ENST00000619580 KDRP35968 1356 aa27.62■■■□□ 2.01
PTMS-207ENST00000619580 IFNL2Q8IZJ0 200 aa27.62■■■□□ 2.01
PTMS-207ENST00000619580 TAF1LQ8IZX4 1826 aa27.62■■■□□ 2.01
PTMS-207ENST00000619580 PHKG2P15735 406 aa27.61■■■□□ 2.01
PTMS-207ENST00000619580 C16orf71Q8IYS4 520 aaPredicted RBP27.61■■■□□ 2.01
PTMS-207ENST00000619580 JMYQ8N9B5 988 aa27.61■■■□□ 2.01
PTMS-207ENST00000619580 RBM46Q8TBY0 533 aaKnown RBP27.61■■■□□ 2.01
PTMS-207ENST00000619580 SMARCC1Q92922 1105 aaPredicted RBP27.61■■■□□ 2.01
PTMS-207ENST00000619580 CICQ96RK0 1608 aaPredicted RBP27.6■■■□□ 2.01
PTMS-207ENST00000619580 SSFA2P28290 1259 aa27.6■■■□□ 2.01
PTMS-207ENST00000619580 A0A0G2JLW4 131 aa27.59■■■□□ 2.01
PTMS-207ENST00000619580 PRELPP51888 382 aa27.59■■■□□ 2.01
PTMS-207ENST00000619580 AEBP1Q8IUX7 1158 aa27.59■■■□□ 2.01
PTMS-207ENST00000619580 MMP10P09238 476 aa27.58■■■□□ 2.01
PTMS-207ENST00000619580 WDR90Q96KV7 1748 aa27.58■■■□□ 2.01
PTMS-207ENST00000619580 AMOTQ4VCS5 1084 aa27.57■■■□□ 2
PTMS-207ENST00000619580 PLEKHO1Q53GL0 409 aaPredicted RBP27.57■■■□□ 2
PTMS-207ENST00000619580 SULT6B1Q6IMI4 303 aa27.57■■■□□ 2
PTMS-207ENST00000619580 LINC00116Q8NCU8 138 aa27.56■■■□□ 2
PTMS-207ENST00000619580 PXDNLA1KZ92 1463 aa27.56■■■□□ 2
PTMS-207ENST00000619580 COL3A1P02461 1466 aaPredicted RBP27.56■■■□□ 2
PTMS-207ENST00000619580 CNGB1Q14028 1251 aaPredicted RBP27.55■■■□□ 2
PTMS-207ENST00000619580 PIGBQ92521 554 aa27.55■■■□□ 2
PTMS-207ENST00000619580 UBR3Q6ZT12 1888 aa27.55■■■□□ 2
PTMS-207ENST00000619580 GNPATO15228 680 aa27.54■■■□□ 2
PTMS-207ENST00000619580 DIAPH1O60610 1272 aaKnown RBP27.53■■■□□ 2
PTMS-207ENST00000619580 TGFB2P61812 414 aa27.53■■■□□ 2
PTMS-207ENST00000619580 LOC102724428A0A0B4J2F2 783 aa27.52■■■□□ 2
PTMS-207ENST00000619580 FCHSD2O94868 740 aa27.52■■■□□ 2
PTMS-207ENST00000619580 HSP90AB1P08238 724 aaKnown RBP27.52■■■□□ 2
PTMS-207ENST00000619580 SIK1P57059 783 aa27.52■■■□□ 2
PTMS-207ENST00000619580 FSTL1Q12841 308 aa27.52■■■□□ 2
PTMS-207ENST00000619580 C9orf131Q5VYM1 1079 aa27.51■■□□□ 1.99
PTMS-207ENST00000619580 ZNF530Q6P9A1 599 aaPredicted RBP27.51■■□□□ 1.99
PTMS-207ENST00000619580 TMOD3Q9NYL9 352 aa27.51■■□□□ 1.99
PTMS-207ENST00000619580 DPEP1P16444 411 aa27.49■■□□□ 1.99
PTMS-207ENST00000619580 DCAF5Q96JK2 942 aa27.49■■□□□ 1.99
PTMS-207ENST00000619580 KDM6AO15550 1401 aaPredicted RBP27.49■■□□□ 1.99
PTMS-207ENST00000619580 N4BP2Q86UW6 1770 aaPredicted RBP27.48■■□□□ 1.99
PTMS-207ENST00000619580 SCN11AQ9UI33 1791 aa27.48■■□□□ 1.99
PTMS-207ENST00000619580 ERVV-2B6SEH9 535 aa27.47■■□□□ 1.99
PTMS-207ENST00000619580 ITPK1Q13572 414 aa27.47■■□□□ 1.99
PTMS-207ENST00000619580 C1orf141Q5JVX7 400 aa27.47■■□□□ 1.99
PTMS-207ENST00000619580 RRAGCQ9HB90 399 aa27.46■■□□□ 1.99
PTMS-207ENST00000619580 HMOX1P09601 288 aa27.45■■□□□ 1.98
PTMS-207ENST00000619580 ATP6V1AP38606 617 aa27.45■■□□□ 1.98
PTMS-207ENST00000619580 VIRMAQ69YN4 1812 aaKnown RBP27.45■■□□□ 1.98
PTMS-207ENST00000619580 ZNF831Q5JPB2 1677 aa27.44■■□□□ 1.98
PTMS-207ENST00000619580 ASAP1Q9ULH1 1129 aa27.44■■□□□ 1.98
PTMS-207ENST00000619580 KDM2BQ8NHM5 1336 aa27.43■■□□□ 1.98
PTMS-207ENST00000619580 NLGN1Q8N2Q7 840 aa27.43■■□□□ 1.98
PTMS-207ENST00000619580 KIAA1551Q9HCM1 1747 aa27.43■■□□□ 1.98
PTMS-207ENST00000619580 KCPQ6ZWJ8 1503 aa27.42■■□□□ 1.98
PTMS-207ENST00000619580 TRAPPC3LQ5T215 181 aa27.42■■□□□ 1.98
PTMS-207ENST00000619580 CCDC87Q9NVE4 849 aa27.42■■□□□ 1.98
PTMS-207ENST00000619580 C10orf71Q711Q0 1435 aa27.41■■□□□ 1.98
PTMS-207ENST00000619580 CFAP53Q96M91 514 aa27.41■■□□□ 1.98
PTMS-207ENST00000619580 KIF13BQ9NQT8 1826 aa27.41■■□□□ 1.98
PTMS-207ENST00000619580 ADAMTS7Q9UKP4 1686 aa27.4■■□□□ 1.98
PTMS-207ENST00000619580 PPP2R1AP30153 589 aa27.4■■□□□ 1.98
PTMS-207ENST00000619580 AKAP4Q5JQC9 854 aa27.4■■□□□ 1.98
PTMS-207ENST00000619580 ATG3Q9NT62 314 aa27.4■■□□□ 1.98
PTMS-207ENST00000619580 RNF181Q9P0P0 153 aa27.4■■□□□ 1.98
PTMS-207ENST00000619580 U2SURPO15042 1029 aaKnown RBP27.39■■□□□ 1.98
PTMS-207ENST00000619580 RTCBQ9Y3I0 505 aaKnown RBP27.39■■□□□ 1.98
PTMS-207ENST00000619580 HSPA1AP0DMV8 641 aaKnown RBP27.38■■□□□ 1.97
PTMS-207ENST00000619580 HSPA1BP0DMV9 641 aaKnown RBP27.38■■□□□ 1.97
PTMS-207ENST00000619580 KCNA3P22001 575 aa27.38■■□□□ 1.97
PTMS-207ENST00000619580 CABP4P57796 275 aa27.38■■□□□ 1.97
PTMS-207ENST00000619580 SMC1BQ8NDV3 1235 aa27.37■■□□□ 1.97
PTMS-207ENST00000619580 PARP3Q9Y6F1 533 aa27.37■■□□□ 1.97
PTMS-207ENST00000619580 PIM2Q9P1W9 311 aa27.36■■□□□ 1.97
PTMS-207ENST00000619580 MRC1P22897 1456 aa27.36■■□□□ 1.97
PTMS-207ENST00000619580 ARHGEF1Q92888 912 aaKnown RBP27.35■■□□□ 1.97
PTMS-207ENST00000619580 COL5A3P25940 1745 aaPredicted RBP27.35■■□□□ 1.97
PTMS-207ENST00000619580 MTHFSDQ2M296 383 aaKnown RBP27.34■■□□□ 1.97
PTMS-207ENST00000619580 GYS1P13807 737 aa27.33■■□□□ 1.97
PTMS-207ENST00000619580 DALRD3Q5D0E6 543 aaKnown RBP27.33■■□□□ 1.97
PTMS-207ENST00000619580 RFC4P35249 363 aa27.32■■□□□ 1.96
PTMS-207ENST00000619580 NFATC2IPQ8NCF5 419 aa27.32■■□□□ 1.96
PTMS-207ENST00000619580 NUDCQ9Y266 331 aa27.31■■□□□ 1.96
PTMS-207ENST00000619580 RBM42Q9BTD8 480 aaKnown RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms