RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 MKNK2Q9HBH9 465 aa23.74■■□□□ 1.39
FGFR1-241ENST00000619564 CASTP20810 708 aaKnown RBP23.74■■□□□ 1.39
FGFR1-241ENST00000619564 DZIP1Q86YF9 867 aaKnown RBP23.74■■□□□ 1.39
FGFR1-241ENST00000619564 CCDC181Q5TID7 509 aa23.73■■□□□ 1.39
FGFR1-241ENST00000619564 TRMT112Q9UI30 125 aaKnown RBP23.73■■□□□ 1.39
FGFR1-241ENST00000619564 ALDH1L2Q3SY69 923 aa23.73■■□□□ 1.39
FGFR1-241ENST00000619564 WASLO00401 505 aaPredicted RBP23.73■■□□□ 1.39
FGFR1-241ENST00000619564 NGLY1Q96IV0 654 aa23.73■■□□□ 1.39
FGFR1-241ENST00000619564 TNIP1Q15025 636 aa23.73■■□□□ 1.39
FGFR1-241ENST00000619564 VSIG10Q8N0Z9 540 aa23.73■■□□□ 1.39
FGFR1-241ENST00000619564 MINDY4BA8MYZ0 360 aa23.72■■□□□ 1.39
FGFR1-241ENST00000619564 MAP3K12Q12852 859 aa23.72■■□□□ 1.39
FGFR1-241ENST00000619564 CAMSAP2Q08AD1 1489 aa23.72■■□□□ 1.39
FGFR1-241ENST00000619564 SLC5A1P13866 664 aa23.72■■□□□ 1.39
FGFR1-241ENST00000619564 EXOC5O00471 708 aa23.72■■□□□ 1.39
FGFR1-241ENST00000619564 WDHD1O75717 1129 aaPredicted RBP23.72■■□□□ 1.39
FGFR1-241ENST00000619564 DESP17661 470 aa23.72■■□□□ 1.39
FGFR1-241ENST00000619564 RPGRQ92834 1020 aaKnown RBP23.72■■□□□ 1.39
FGFR1-241ENST00000619564 NAPBQ9H115 298 aa23.71■■□□□ 1.39
FGFR1-241ENST00000619564 SEPT11Q9NVA2 429 aaKnown RBP23.71■■□□□ 1.39
FGFR1-241ENST00000619564 BACH2Q9BYV9 841 aa23.71■■□□□ 1.39
FGFR1-241ENST00000619564 HYPKQ9NX55 129 aa23.71■■□□□ 1.39
FGFR1-241ENST00000619564 NUP62CLQ9H1M0 184 aa23.7■■□□□ 1.39
FGFR1-241ENST00000619564 NEFHP12036 1026 aa23.7■■□□□ 1.38
FGFR1-241ENST00000619564 KIF14Q15058 1648 aa23.7■■□□□ 1.38
FGFR1-241ENST00000619564 DDX11Q96FC9 970 aa23.69■■□□□ 1.38
FGFR1-241ENST00000619564 BOLA2Q9H3K6 86 aa23.69■■□□□ 1.38
FGFR1-241ENST00000619564 ANKRD18BA2A2Z9 1011 aa23.69■■□□□ 1.38
FGFR1-241ENST00000619564 NAIPQ13075 1403 aa23.69■■□□□ 1.38
FGFR1-241ENST00000619564 DNAAF4Q8WXU2 420 aa23.69■■□□□ 1.38
FGFR1-241ENST00000619564 EMILIN1Q9Y6C2 1016 aa23.69■■□□□ 1.38
FGFR1-241ENST00000619564 CCDC196A0A1B0GTZ2 297 aa23.69■■□□□ 1.38
FGFR1-241ENST00000619564 SLF2Q8IX21 1173 aa23.69■■□□□ 1.38
FGFR1-241ENST00000619564 CIZ1Q9ULV3 898 aaPredicted RBP23.68■■□□□ 1.38
FGFR1-241ENST00000619564 DBF4Q9UBU7 674 aaPredicted RBP23.68■■□□□ 1.38
FGFR1-241ENST00000619564 FAM135AQ9P2D6 1515 aa23.68■■□□□ 1.38
FGFR1-241ENST00000619564 HMGN5P82970 282 aaKnown RBP23.67■■□□□ 1.38
FGFR1-241ENST00000619564 AXDND1Q5T1B0 1012 aaPredicted RBP23.67■■□□□ 1.38
FGFR1-241ENST00000619564 FBXO31Q5XUX0 539 aaPredicted RBP23.67■■□□□ 1.38
FGFR1-241ENST00000619564 UPF3BQ9BZI7 483 aaKnown RBP23.67■■□□□ 1.38
FGFR1-241ENST00000619564 DMRT2Q9Y5R5 561 aa23.67■■□□□ 1.38
FGFR1-241ENST00000619564 TRIM21P19474 475 aaKnown RBP23.67■■□□□ 1.38
FGFR1-241ENST00000619564 SMTNL1A8MU46 457 aa23.67■■□□□ 1.38
FGFR1-241ENST00000619564 PRPF40BQ6NWY9 871 aaKnown RBP23.66■■□□□ 1.38
FGFR1-241ENST00000619564 GOLGA6L10A6NI86 522 aa23.66■■□□□ 1.38
FGFR1-241ENST00000619564 KRT28Q7Z3Y7 464 aa23.66■■□□□ 1.38
FGFR1-241ENST00000619564 MTERF4Q7Z6M4 381 aaKnown RBP23.66■■□□□ 1.38
FGFR1-241ENST00000619564 CTCFLQ8NI51 663 aaPredicted RBP23.66■■□□□ 1.38
FGFR1-241ENST00000619564 ZNF444Q8N0Y2 327 aaPredicted RBP23.66■■□□□ 1.38
FGFR1-241ENST00000619564 ANKRD18AQ8IVF6 992 aa23.66■■□□□ 1.38
FGFR1-241ENST00000619564 TEX13AQ9BXU3 409 aaPredicted RBP23.66■■□□□ 1.38
FGFR1-241ENST00000619564 PPP1R12BO60237 982 aaPredicted RBP23.66■■□□□ 1.38
FGFR1-241ENST00000619564 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
FGFR1-241ENST00000619564 SSH1Q8WYL5 1049 aa23.65■■□□□ 1.38
FGFR1-241ENST00000619564 CEBPAP49715 358 aaPredicted RBP23.65■■□□□ 1.38
FGFR1-241ENST00000619564 CCDC191Q8NCU4 936 aa23.65■■□□□ 1.38
FGFR1-241ENST00000619564 H0YHG0 523 aa23.65■■□□□ 1.38
FGFR1-241ENST00000619564 EIF5P55010 431 aaKnown RBP23.65■■□□□ 1.38
FGFR1-241ENST00000619564 ZRSR2Q15696 482 aaKnown RBP23.65■■□□□ 1.38
FGFR1-241ENST00000619564 IQCA1Q86XH1 822 aa23.64■■□□□ 1.38
FGFR1-241ENST00000619564 TTC21BQ7Z4L5 1316 aa23.64■■□□□ 1.38
FGFR1-241ENST00000619564 SMARCA5O60264 1052 aaPredicted RBP23.64■■□□□ 1.38
FGFR1-241ENST00000619564 SEPT7Q16181 437 aaKnown RBP23.64■■□□□ 1.38
FGFR1-241ENST00000619564 IDI1Q13907 227 aa23.64■■□□□ 1.37
FGFR1-241ENST00000619564 CWC15Q9P013 229 aaKnown RBP23.63■■□□□ 1.37
FGFR1-241ENST00000619564 A0A087WZG4 1122 aa23.63■■□□□ 1.37
FGFR1-241ENST00000619564 PLB1Q6P1J6 1458 aa23.63■■□□□ 1.37
FGFR1-241ENST00000619564 HMGB1P09429 215 aaKnown RBP23.63■■□□□ 1.37
FGFR1-241ENST00000619564 RNF41Q9H4P4 317 aaPredicted RBP23.63■■□□□ 1.37
FGFR1-241ENST00000619564 CCDC96Q2M329 555 aa23.63■■□□□ 1.37
FGFR1-241ENST00000619564 PPP4R3AQ6IN85 833 aa23.63■■□□□ 1.37
FGFR1-241ENST00000619564 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
FGFR1-241ENST00000619564 RANBP6O60518 1105 aaKnown RBP23.62■■□□□ 1.37
FGFR1-241ENST00000619564 IFNL2Q8IZJ0 200 aa23.62■■□□□ 1.37
FGFR1-241ENST00000619564 NEBLO76041 1014 aa23.62■■□□□ 1.37
FGFR1-241ENST00000619564 POTEJP0CG39 1038 aa23.62■■□□□ 1.37
FGFR1-241ENST00000619564 RARSP54136 660 aaKnown RBP23.62■■□□□ 1.37
FGFR1-241ENST00000619564 CCDC83Q8IWF9 413 aa23.62■■□□□ 1.37
FGFR1-241ENST00000619564 DNAI2Q9GZS0 605 aa23.62■■□□□ 1.37
FGFR1-241ENST00000619564 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
FGFR1-241ENST00000619564 SCLT1Q96NL6 688 aa23.61■■□□□ 1.37
FGFR1-241ENST00000619564 CCDC8Q9H0W5 538 aaPredicted RBP23.61■■□□□ 1.37
FGFR1-241ENST00000619564 F6X3S4 739 aa23.61■■□□□ 1.37
FGFR1-241ENST00000619564 CUL5Q93034 780 aa23.61■■□□□ 1.37
FGFR1-241ENST00000619564 MAP7D2Q96T17 732 aa23.61■■□□□ 1.37
FGFR1-241ENST00000619564 IBSPP21815 317 aaPredicted RBP23.61■■□□□ 1.37
FGFR1-241ENST00000619564 LRRFIP2Q9Y608 721 aaKnown RBP23.61■■□□□ 1.37
FGFR1-241ENST00000619564 ZNF213O14771 459 aa23.6■■□□□ 1.37
FGFR1-241ENST00000619564 PHAXQ9H814 394 aaKnown RBP23.6■■□□□ 1.37
FGFR1-241ENST00000619564 DENND4BO75064 1496 aaPredicted RBP23.6■■□□□ 1.37
FGFR1-241ENST00000619564 IQCEQ6IPM2 695 aa23.6■■□□□ 1.37
FGFR1-241ENST00000619564 GPTP24298 496 aa23.6■■□□□ 1.37
FGFR1-241ENST00000619564 TTLL12Q14166 644 aaPredicted RBP23.6■■□□□ 1.37
FGFR1-241ENST00000619564 ZBTB3Q9H5J0 574 aa23.6■■□□□ 1.37
FGFR1-241ENST00000619564 FAM177A1Q8N128 213 aaPredicted RBP23.6■■□□□ 1.37
FGFR1-241ENST00000619564 SLC12A7Q9Y666 1083 aa23.6■■□□□ 1.37
FGFR1-241ENST00000619564 C6orf229H3BNL8 230 aa23.59■■□□□ 1.37
FGFR1-241ENST00000619564 ABCC5O15440 1437 aa23.59■■□□□ 1.37
FGFR1-241ENST00000619564 CDC5LQ99459 802 aaKnown RBP23.59■■□□□ 1.37
FGFR1-241ENST00000619564 RAB34Q9BZG1 259 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms