RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 COL16A1Q07092 1604 aaPredicted RBP16.1■□□□□ 0.17
TNFAIP3-209ENST00000619035 COL14A1Q05707 1796 aaKnown RBP16.1■□□□□ 0.17
TNFAIP3-209ENST00000619035 CHMP4AQ9BY43 222 aa16.1■□□□□ 0.17
TNFAIP3-209ENST00000619035 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
TNFAIP3-209ENST00000619035 KCNQ3O43525 872 aa16.1■□□□□ 0.17
TNFAIP3-209ENST00000619035 PHKG2P15735 406 aa16.1■□□□□ 0.17
TNFAIP3-209ENST00000619035 NPM2Q86SE8 214 aaKnown RBP16.1■□□□□ 0.17
TNFAIP3-209ENST00000619035 CARD10Q9BWT7 1032 aa16.1■□□□□ 0.17
TNFAIP3-209ENST00000619035 BACH2Q9BYV9 841 aa16.1■□□□□ 0.17
TNFAIP3-209ENST00000619035 PARP4Q9UKK3 1724 aaKnown RBP16.09■□□□□ 0.17
TNFAIP3-209ENST00000619035 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
TNFAIP3-209ENST00000619035 LARP1Q6PKG0 1096 aaKnown RBP16.09■□□□□ 0.17
TNFAIP3-209ENST00000619035 IFNL2Q8IZJ0 200 aa16.08■□□□□ 0.17
TNFAIP3-209ENST00000619035 USP35Q9P2H5 1018 aa16.08■□□□□ 0.17
TNFAIP3-209ENST00000619035 EIF4A1P60842 406 aaKnown RBP16.08■□□□□ 0.16
TNFAIP3-209ENST00000619035 G2E3Q7L622 706 aa16.08■□□□□ 0.16
TNFAIP3-209ENST00000619035 ZBTB40Q9NUA8 1239 aa16.08■□□□□ 0.16
TNFAIP3-209ENST00000619035 KDM3BQ7LBC6 1761 aa16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 BTG4Q9NY30 223 aa16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 PTPRCP08575 1304 aa16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 CYP27B1O15528 508 aa16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 CACNA1FO60840 1977 aa16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 KDM6AO15550 1401 aaPredicted RBP16.07■□□□□ 0.16
TNFAIP3-209ENST00000619035 HOXB7P09629 217 aa16.06■□□□□ 0.16
TNFAIP3-209ENST00000619035 CHMP4BQ9H444 224 aaKnown RBP16.06■□□□□ 0.16
TNFAIP3-209ENST00000619035 RGS12O14924 1447 aa16.06■□□□□ 0.16
TNFAIP3-209ENST00000619035 SCN11AQ9UI33 1791 aa16.06■□□□□ 0.16
TNFAIP3-209ENST00000619035 ZBTB7BO15156 539 aaPredicted RBP16.06■□□□□ 0.16
TNFAIP3-209ENST00000619035 C1orf115Q9H7X2 142 aa16.05■□□□□ 0.16
TNFAIP3-209ENST00000619035 SIPA1L3O60292 1781 aaPredicted RBP16.05■□□□□ 0.16
TNFAIP3-209ENST00000619035 SLC4A10Q6U841 1118 aa16.05■□□□□ 0.16
TNFAIP3-209ENST00000619035 SLC52A2Q9HAB3 445 aa16.05■□□□□ 0.16
TNFAIP3-209ENST00000619035 F6X3S4 739 aa16.04■□□□□ 0.16
TNFAIP3-209ENST00000619035 IL2RBP14784 551 aa16.04■□□□□ 0.16
TNFAIP3-209ENST00000619035 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
TNFAIP3-209ENST00000619035 FLIIQ13045 1269 aa16.03■□□□□ 0.16
TNFAIP3-209ENST00000619035 FKBP5Q13451 457 aaPredicted RBP16.03■□□□□ 0.16
TNFAIP3-209ENST00000619035 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
TNFAIP3-209ENST00000619035 DCAF5Q96JK2 942 aa16.03■□□□□ 0.16
TNFAIP3-209ENST00000619035 SLC39A6Q13433 755 aa16.03■□□□□ 0.16
TNFAIP3-209ENST00000619035 UBAP1LF5GYI3 381 aa16.02■□□□□ 0.16
TNFAIP3-209ENST00000619035 ADAMTS2O95450 1211 aa16.02■□□□□ 0.16
TNFAIP3-209ENST00000619035 ANP32AP39687 249 aaKnown RBP16.02■□□□□ 0.16
TNFAIP3-209ENST00000619035 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.16
TNFAIP3-209ENST00000619035 PCDH11XQ9BZA7 1347 aa16.02■□□□□ 0.16
TNFAIP3-209ENST00000619035 PCDH11YQ9BZA8 1340 aa16.02■□□□□ 0.16
TNFAIP3-209ENST00000619035 DDX54Q8TDD1 881 aaKnown RBP16.02■□□□□ 0.15
TNFAIP3-209ENST00000619035 MRC1P22897 1456 aa16.02■□□□□ 0.15
TNFAIP3-209ENST00000619035 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
TNFAIP3-209ENST00000619035 NUTM2BA6NNL0 878 aaPredicted RBP16.01■□□□□ 0.15
TNFAIP3-209ENST00000619035 NUTM2EB1AL46 878 aaPredicted RBP16.01■□□□□ 0.15
TNFAIP3-209ENST00000619035 HDAC1Q13547 482 aaPredicted RBP16.01■□□□□ 0.15
TNFAIP3-209ENST00000619035 NUTM2AQ8IVF1 878 aaPredicted RBP16.01■□□□□ 0.15
TNFAIP3-209ENST00000619035 ANP32EQ9BTT0 268 aa16.01■□□□□ 0.15
TNFAIP3-209ENST00000619035 PRAMEF22A3QJZ6 481 aa16■□□□□ 0.15
TNFAIP3-209ENST00000619035 CABP4P57796 275 aa16■□□□□ 0.15
TNFAIP3-209ENST00000619035 ZNF790Q6PG37 636 aa16■□□□□ 0.15
TNFAIP3-209ENST00000619035 PHAXQ9H814 394 aaKnown RBP16■□□□□ 0.15
TNFAIP3-209ENST00000619035 GIGYF1O75420 1035 aaPredicted RBP15.99■□□□□ 0.15
TNFAIP3-209ENST00000619035 ANXA1P04083 346 aa15.99■□□□□ 0.15
TNFAIP3-209ENST00000619035 NKX1-1Q15270 411 aaPredicted RBP15.99■□□□□ 0.15
TNFAIP3-209ENST00000619035 C8orf34Q49A92 452 aa15.99■□□□□ 0.15
TNFAIP3-209ENST00000619035 HEG1Q9ULI3 1381 aa15.99■□□□□ 0.15
TNFAIP3-209ENST00000619035 PLCH1Q4KWH8 1693 aa15.98■□□□□ 0.15
TNFAIP3-209ENST00000619035 TTC5Q8N0Z6 440 aa15.98■□□□□ 0.15
TNFAIP3-209ENST00000619035 PDZRN3Q9UPQ7 1066 aa15.98■□□□□ 0.15
TNFAIP3-209ENST00000619035 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
TNFAIP3-209ENST00000619035 CCT4P50991 539 aaKnown RBP15.97■□□□□ 0.15
TNFAIP3-209ENST00000619035 ERICH6Q7L0X2 663 aa15.97■□□□□ 0.15
TNFAIP3-209ENST00000619035 CERKQ8TCT0 537 aa15.97■□□□□ 0.15
TNFAIP3-209ENST00000619035 MEIS3Q99687 375 aa15.97■□□□□ 0.15
TNFAIP3-209ENST00000619035 IPO9Q96P70 1041 aaKnown RBP15.97■□□□□ 0.15
TNFAIP3-209ENST00000619035 ERVV-2B6SEH9 535 aa15.96■□□□□ 0.15
TNFAIP3-209ENST00000619035 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
TNFAIP3-209ENST00000619035 CDCA7Q9BWT1 371 aaPredicted RBP15.96■□□□□ 0.15
TNFAIP3-209ENST00000619035 JCADQ9P266 1359 aa15.96■□□□□ 0.15
TNFAIP3-209ENST00000619035 ZNF496Q96IT1 587 aaPredicted RBP15.96■□□□□ 0.14
TNFAIP3-209ENST00000619035 DBF4Q9UBU7 674 aaPredicted RBP15.96■□□□□ 0.14
TNFAIP3-209ENST00000619035 SHANK3Q9BYB0 1731 aa15.95■□□□□ 0.14
TNFAIP3-209ENST00000619035 THRAP3Q9Y2W1 955 aaKnown RBP15.95■□□□□ 0.14
TNFAIP3-209ENST00000619035 DISP2A7MBM2 1401 aa15.95■□□□□ 0.14
TNFAIP3-209ENST00000619035 NOP58Q9Y2X3 529 aaKnown RBP15.94■□□□□ 0.14
TNFAIP3-209ENST00000619035 NRAPQ86VF7 1730 aa15.94■□□□□ 0.14
TNFAIP3-209ENST00000619035 PROSER3Q2NL68 480 aa15.94■□□□□ 0.14
TNFAIP3-209ENST00000619035 SIRT2Q8IXJ6 389 aa15.94■□□□□ 0.14
TNFAIP3-209ENST00000619035 SMC5Q8IY18 1101 aa15.93■□□□□ 0.14
TNFAIP3-209ENST00000619035 WNK3Q9BYP7 1800 aa15.93■□□□□ 0.14
TNFAIP3-209ENST00000619035 FMNL2Q96PY5 1086 aa15.92■□□□□ 0.14
TNFAIP3-209ENST00000619035 SLIT2O94813 1529 aa15.92■□□□□ 0.14
TNFAIP3-209ENST00000619035 C5P01031 1676 aa15.92■□□□□ 0.14
TNFAIP3-209ENST00000619035 PI4KAP2A4QPH2 592 aa15.92■□□□□ 0.14
TNFAIP3-209ENST00000619035 PI4KAP1Q8N8J0 262 aa15.92■□□□□ 0.14
TNFAIP3-209ENST00000619035 SPATA31A6Q5VVP1 1343 aa15.91■□□□□ 0.14
TNFAIP3-209ENST00000619035 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
TNFAIP3-209ENST00000619035 ATP10DQ9P241 1426 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms