RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 IL2RBP14784 551 aa9.82□□□□□ -0.84
VPS45-213ENST00000618148 TATP17735 454 aaPredicted RBP9.82□□□□□ -0.84
VPS45-213ENST00000618148 PLEKHO1Q53GL0 409 aaPredicted RBP9.82□□□□□ -0.84
VPS45-213ENST00000618148 BARGINQ6ZT62 677 aa9.82□□□□□ -0.84
VPS45-213ENST00000618148 CEMIPQ8WUJ3 1361 aa9.82□□□□□ -0.84
VPS45-213ENST00000618148 MAP3K5Q99683 1374 aa9.82□□□□□ -0.84
VPS45-213ENST00000618148 TRMT2AQ8IZ69 625 aaKnown RBP9.81□□□□□ -0.84
VPS45-213ENST00000618148 CDCA7Q9BWT1 371 aaPredicted RBP9.81□□□□□ -0.84
VPS45-213ENST00000618148 AFF2P51816 1311 aa9.81□□□□□ -0.84
VPS45-213ENST00000618148 TNS2Q63HR2 1409 aa9.81□□□□□ -0.84
VPS45-213ENST00000618148 ATN1P54259 1190 aaPredicted RBP9.8□□□□□ -0.84
VPS45-213ENST00000618148 USP21Q9UK80 565 aa9.8□□□□□ -0.84
VPS45-213ENST00000618148 THSD7AQ9UPZ6 1657 aa9.8□□□□□ -0.84
VPS45-213ENST00000618148 GLI3P10071 1580 aa9.8□□□□□ -0.84
VPS45-213ENST00000618148 MRC1P22897 1456 aa9.8□□□□□ -0.84
VPS45-213ENST00000618148 GNAT3A8MTJ3 354 aa9.8□□□□□ -0.84
VPS45-213ENST00000618148 GOLGA2Q08379 1002 aa9.8□□□□□ -0.84
VPS45-213ENST00000618148 AKAP4Q5JQC9 854 aa9.8□□□□□ -0.84
VPS45-213ENST00000618148 MEX3CQ5U5Q3 659 aaKnown RBP9.8□□□□□ -0.84
VPS45-213ENST00000618148 ZNF530Q6P9A1 599 aaPredicted RBP9.8□□□□□ -0.84
VPS45-213ENST00000618148 SPG7Q9UQ90 795 aa9.8□□□□□ -0.84
VPS45-213ENST00000618148 SENP3-EIF4A1A0A087X0R7 540 aa9.79□□□□□ -0.84
VPS45-213ENST00000618148 E9PSI1 815 aa9.79□□□□□ -0.84
VPS45-213ENST00000618148 CYP27B1O15528 508 aa9.79□□□□□ -0.84
VPS45-213ENST00000618148 CALD1Q05682 793 aaKnown RBP9.79□□□□□ -0.84
VPS45-213ENST00000618148 SLFN5Q08AF3 891 aa9.79□□□□□ -0.84
VPS45-213ENST00000618148 NKX1-1Q15270 411 aaPredicted RBP9.79□□□□□ -0.84
VPS45-213ENST00000618148 NEUROD2Q15784 382 aa9.79□□□□□ -0.84
VPS45-213ENST00000618148 PCDH11XQ9BZA7 1347 aa9.79□□□□□ -0.84
VPS45-213ENST00000618148 PCDH11YQ9BZA8 1340 aa9.79□□□□□ -0.84
VPS45-213ENST00000618148 ZNF853P0CG23 659 aa9.78□□□□□ -0.84
VPS45-213ENST00000618148 PHKG2P15735 406 aa9.78□□□□□ -0.84
VPS45-213ENST00000618148 ZCRB1Q8TBF4 217 aaKnown RBP9.78□□□□□ -0.84
VPS45-213ENST00000618148 SALL2Q9Y467 1007 aaPredicted RBP9.78□□□□□ -0.84
VPS45-213ENST00000618148 KDM6AO15550 1401 aaPredicted RBP9.78□□□□□ -0.84
VPS45-213ENST00000618148 SCN11AQ9UI33 1791 aa9.78□□□□□ -0.84
VPS45-213ENST00000618148 ONECUT3O60422 494 aaPredicted RBP9.77□□□□□ -0.84
VPS45-213ENST00000618148 DUSP27Q5VZP5 1158 aa9.77□□□□□ -0.84
VPS45-213ENST00000618148 IL17REQ8NFR9 667 aa9.77□□□□□ -0.84
VPS45-213ENST00000618148 CDCA7LQ96GN5 454 aa9.77□□□□□ -0.84
VPS45-213ENST00000618148 IFT57Q9NWB7 429 aa9.77□□□□□ -0.84
VPS45-213ENST00000618148 TRPC5Q9UL62 973 aaPredicted RBP9.77□□□□□ -0.84
VPS45-213ENST00000618148 CENPBP07199 599 aaPredicted RBP9.77□□□□□ -0.85
VPS45-213ENST00000618148 HSP90AB1P08238 724 aaKnown RBP9.77□□□□□ -0.85
VPS45-213ENST00000618148 C1orf141Q5JVX7 400 aa9.77□□□□□ -0.85
VPS45-213ENST00000618148 IFNL2Q8IZJ0 200 aa9.77□□□□□ -0.85
VPS45-213ENST00000618148 GJD4Q96KN9 370 aaPredicted RBP9.77□□□□□ -0.85
VPS45-213ENST00000618148 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.85
VPS45-213ENST00000618148 BABAM1Q9NWV8 329 aa9.77□□□□□ -0.85
VPS45-213ENST00000618148 USP35Q9P2H5 1018 aa9.77□□□□□ -0.85
VPS45-213ENST00000618148 SIPA1L3O60292 1781 aaPredicted RBP9.77□□□□□ -0.85
VPS45-213ENST00000618148 DCTN1Q14203 1278 aa9.76□□□□□ -0.85
VPS45-213ENST00000618148 MCM10Q7L590 875 aa9.76□□□□□ -0.85
VPS45-213ENST00000618148 RTF1Q92541 710 aaKnown RBP9.76□□□□□ -0.85
VPS45-213ENST00000618148 DCAF5Q96JK2 942 aa9.76□□□□□ -0.85
VPS45-213ENST00000618148 CFAP44Q96MT7 982 aa9.76□□□□□ -0.85
VPS45-213ENST00000618148 THUMPD2Q9BTF0 503 aaKnown RBP9.76□□□□□ -0.85
VPS45-213ENST00000618148 MYH16Q9H6N6 1097 aa9.76□□□□□ -0.85
VPS45-213ENST00000618148 VIRMAQ69YN4 1812 aaKnown RBP9.75□□□□□ -0.85
VPS45-213ENST00000618148 CHL1O00533 1208 aa9.75□□□□□ -0.85
VPS45-213ENST00000618148 RNMTO43148 476 aaKnown RBP9.75□□□□□ -0.85
VPS45-213ENST00000618148 BCL9O00512 1426 aa9.75□□□□□ -0.85
VPS45-213ENST00000618148 TOGARAM1Q9Y4F4 1720 aa9.74□□□□□ -0.85
VPS45-213ENST00000618148 GNAI1P63096 354 aa9.74□□□□□ -0.85
VPS45-213ENST00000618148 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
VPS45-213ENST00000618148 FANCIQ9NVI1 1328 aa9.74□□□□□ -0.85
VPS45-213ENST00000618148 EXOC5O00471 708 aa9.74□□□□□ -0.85
VPS45-213ENST00000618148 MPRIPQ6WCQ1 1025 aa9.74□□□□□ -0.85
VPS45-213ENST00000618148 KIF12Q96FN5 646 aa9.74□□□□□ -0.85
VPS45-213ENST00000618148 LGR6Q9HBX8 967 aa9.74□□□□□ -0.85
VPS45-213ENST00000618148 CCDC9Q9Y3X0 531 aaKnown RBP9.74□□□□□ -0.85
VPS45-213ENST00000618148 KDM3BQ7LBC6 1761 aa9.73□□□□□ -0.85
VPS45-213ENST00000618148 POTEFA5A3E0 1075 aa9.73□□□□□ -0.85
VPS45-213ENST00000618148 TAF7Q15545 349 aaPredicted RBP9.73□□□□□ -0.85
VPS45-213ENST00000618148 DDB1Q16531 1140 aa9.73□□□□□ -0.85
VPS45-213ENST00000618148 FAM98CQ17RN3 349 aaKnown RBP9.73□□□□□ -0.85
VPS45-213ENST00000618148 QTRT2Q9H974 415 aaKnown RBP9.73□□□□□ -0.85
VPS45-213ENST00000618148 BMP2KQ9NSY1 1161 aaPredicted RBP9.73□□□□□ -0.85
VPS45-213ENST00000618148 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
VPS45-213ENST00000618148 CT47B1P0C2W7 299 aaPredicted RBP9.72□□□□□ -0.85
VPS45-213ENST00000618148 SLC52A2Q9HAB3 445 aa9.72□□□□□ -0.85
VPS45-213ENST00000618148 MBIPQ9NS73 344 aa9.72□□□□□ -0.85
VPS45-213ENST00000618148 RGS17Q9UGC6 210 aaPredicted RBP9.72□□□□□ -0.85
VPS45-213ENST00000618148 PAPPAQ13219 1627 aa9.72□□□□□ -0.85
VPS45-213ENST00000618148 MARCH10Q8NA82 808 aaPredicted RBP9.71□□□□□ -0.85
VPS45-213ENST00000618148 TSR2Q969E8 191 aaKnown RBP9.71□□□□□ -0.85
VPS45-213ENST00000618148 TIE1P35590 1138 aa9.71□□□□□ -0.86
VPS45-213ENST00000618148 RBM6P78332 1123 aaKnown RBP9.71□□□□□ -0.86
VPS45-213ENST00000618148 TEFQ10587 303 aa9.71□□□□□ -0.86
VPS45-213ENST00000618148 DDX54Q8TDD1 881 aaKnown RBP9.71□□□□□ -0.86
VPS45-213ENST00000618148 HEG1Q9ULI3 1381 aa9.71□□□□□ -0.86
VPS45-213ENST00000618148 SOS1Q07889 1333 aaPredicted RBP9.7□□□□□ -0.86
VPS45-213ENST00000618148 CDAN1Q8IWY9 1227 aa9.7□□□□□ -0.86
VPS45-213ENST00000618148 UBR2Q8IWV8 1755 aa9.69□□□□□ -0.86
VPS45-213ENST00000618148 DOT1LQ8TEK3 1739 aa9.69□□□□□ -0.86
VPS45-213ENST00000618148 RNF123Q5XPI4 1314 aa9.69□□□□□ -0.86
VPS45-213ENST00000618148 SEPT12Q8IYM1 358 aa9.69□□□□□ -0.86
VPS45-213ENST00000618148 ZNF428Q96B54 188 aa9.69□□□□□ -0.86
VPS45-213ENST00000618148 TSPYL4Q9UJ04 414 aa9.69□□□□□ -0.86
VPS45-213ENST00000618148 ITGB4P16144 1822 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms