RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	POLD1	P28340	1107 aa		30.22	■■■□□ 2.43
ARHGEF1-223	ENST00000617585	AKAP4	Q5JQC9	854 aa		30.22	■■■□□ 2.43
ARHGEF1-223	ENST00000617585	ADAMTS7	Q9UKP4	1686 aa		30.21	■■■□□ 2.43
ARHGEF1-223	ENST00000617585	ITPK1	Q13572	414 aa		30.21	■■■□□ 2.43
ARHGEF1-223	ENST00000617585	LINC00116	Q8NCU8	138 aa		30.21	■■■□□ 2.43
ARHGEF1-223	ENST00000617585	COL5A3	P25940	1745 aa	Predicted RBP	30.2	■■■□□ 2.43
ARHGEF1-223	ENST00000617585	AK7	Q96M32	723 aa		30.2	■■■□□ 2.43
ARHGEF1-223	ENST00000617585	HMOX1	P09601	288 aa		30.19	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	ATP6V1A	P38606	617 aa		30.19	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	CABP4	P57796	275 aa		30.19	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	DCAF8L1	A6NGE4	600 aa		30.18	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	AMIGO3	Q86WK7	504 aa		30.18	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	SLC4A9	Q96Q91	983 aa		30.18	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	CIC	Q96RK0	1608 aa	Predicted RBP	30.18	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	SSFA2	P28290	1259 aa		30.17	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	MSH5	O43196	834 aa		30.16	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	MRC1	P22897	1456 aa		30.16	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	NFATC2IP	Q8NCF5	419 aa		30.15	■■■□□ 2.42
ARHGEF1-223	ENST00000617585	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	30.13	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	MTHFSD	Q2M296	383 aa	Known RBP	30.13	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	CNGB1	Q14028	1251 aa	Predicted RBP	30.12	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	RC3H1	Q5TC82	1133 aa	Known RBP	30.12	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	MYH14	Q7Z406	1995 aa	Known RBP	30.12	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	RBM42	Q9BTD8	480 aa	Known RBP	30.1	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	SLC52A2	Q9HAB3	445 aa		30.1	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	LGR6	Q9HBX8	967 aa		30.1	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	RNMT	O43148	476 aa	Known RBP	30.09	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	PPP2R1A	P30153	589 aa		30.09	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	UTRN	P46939	3433 aa		30.09	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	CFAP53	Q96M91	514 aa		30.09	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	CNTNAP4	Q9C0A0	1308 aa		30.09	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	TJP1	Q07157	1748 aa		30.08	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	GNPAT	O15228	680 aa		30.08	■■■□□ 2.41
ARHGEF1-223	ENST00000617585	U2SURP	O15042	1029 aa	Known RBP	30.07	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	MSL1	Q68DK7	614 aa		30.07	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	PHF14	O94880	888 aa		30.06	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	SMIM5	Q71RC9	77 aa		30.06	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	CHD4	Q14839	1912 aa		30.05	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	ADRA2B	P18089	450 aa		30.04	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	GAS2L2	Q8NHY3	880 aa		30.03	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	RTCB	Q9Y3I0	505 aa	Known RBP	30.03	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	PTCD1	O75127	700 aa	Known RBP	30.02	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	RPS6KA4	O75676	772 aa		30.02	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	SIPA1L3	O60292	1781 aa	Predicted RBP	30.02	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	UBR2	Q8IWV8	1755 aa		30.02	■■■□□ 2.4
ARHGEF1-223	ENST00000617585	YY1	P25490	414 aa		30.01	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	RSPH6A	Q9H0K4	717 aa		30.01	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	NUDC	Q9Y266	331 aa		30.01	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	CD2AP	Q9Y5K6	639 aa		30.01	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	C4A	P0C0L4	1744 aa		30	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	TRAPPC3L	Q5T215	181 aa		30	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	NLGN2	Q8NFZ4	835 aa		30	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	KCP	Q6ZWJ8	1503 aa		30	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	KLHL34	Q8N239	644 aa		29.98	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	GNAT3	A8MTJ3	354 aa		29.97	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	ARHGEF1	Q92888	912 aa	Known RBP	29.97	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	CRKL	P46109	303 aa	Known RBP	29.96	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	IL17RE	Q8NFR9	667 aa		29.96	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	GOLGB1	Q14789	3259 aa	Known RBP	29.96	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	FCHSD2	O94868	740 aa		29.95	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	PRKAR2B	P31323	418 aa		29.95	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	VSIG10	Q8N0Z9	540 aa		29.95	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	PHACTR3	Q96KR7	559 aa		29.95	■■■□□ 2.39
ARHGEF1-223	ENST00000617585	CEMIP	Q8WUJ3	1361 aa		29.94	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	SLC39A6	Q13433	755 aa		29.94	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	KIF13B	Q9NQT8	1826 aa		29.94	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	NLGN1	Q8N2Q7	840 aa		29.93	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	GPR162	Q16538	588 aa		29.92	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	INTS5	Q6P9B9	1019 aa	Known RBP	29.92	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.91	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.91	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	DNAJC10	Q8IXB1	793 aa		29.91	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	GYS1	P13807	737 aa		29.9	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	RFC4	P35249	363 aa		29.9	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	CYP19A1	P11511	503 aa	Predicted RBP	29.89	■■■□□ 2.38
ARHGEF1-223	ENST00000617585	TEF	Q10587	303 aa		29.88	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	MMP10	P09238	476 aa		29.87	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	CCDC87	Q9NVE4	849 aa		29.87	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	ZNF790	Q6PG37	636 aa		29.85	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	USP42	Q9H9J4	1324 aa	Known RBP	29.85	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	YBX3	P16989	372 aa	Known RBP eCLIP	29.84	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	SOS1	Q07889	1333 aa	Predicted RBP	29.84	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	KIAA1551	Q9HCM1	1747 aa		29.84	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	GRIN3B	O60391	1043 aa		29.83	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	TTC5	Q8N0Z6	440 aa		29.83	■■■□□ 2.37
ARHGEF1-223	ENST00000617585	HTATSF1	O43719	755 aa	Known RBP	29.82	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	HEG1	Q9ULI3	1381 aa		29.81	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	RALBP1	Q15311	655 aa		29.81	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	DLG5	Q8TDM6	1919 aa		29.81	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	ZNF496	Q96IT1	587 aa	Predicted RBP	29.8	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	C10orf71	Q711Q0	1435 aa		29.79	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	PELP1	Q8IZL8	1130 aa	Known RBP	29.79	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	TEX13A	Q9BXU3	409 aa	Predicted RBP	29.79	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	SRP68	Q9UHB9	627 aa	Known RBP	29.79	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	ZBTB1	Q9Y2K1	713 aa		29.79	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	PLEKHF1	Q96S99	279 aa		29.77	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	COL15A1	P39059	1388 aa		29.77	■■■□□ 2.36
ARHGEF1-223	ENST00000617585	STARD3NL	O95772	234 aa		29.76	■■■□□ 2.35
ARHGEF1-223	ENST00000617585	TGFB2	P61812	414 aa		29.76	■■■□□ 2.35
ARHGEF1-223	ENST00000617585	DDX10	Q13206	875 aa	Known RBP	29.76	■■■□□ 2.35

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms