RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 CC2D1BQ5T0F9 858 aaKnown RBP30.25■■■□□ 2.43
NEDD4L-237ENST00000617539 ERVV-2B6SEH9 535 aa30.24■■■□□ 2.43
NEDD4L-237ENST00000617539 HMGB2P26583 209 aaKnown RBP30.24■■■□□ 2.43
NEDD4L-237ENST00000617539 AK7Q96M32 723 aa30.24■■■□□ 2.43
NEDD4L-237ENST00000617539 SCN11AQ9UI33 1791 aa30.23■■■□□ 2.43
NEDD4L-237ENST00000617539 HSP90AB1P08238 724 aaKnown RBP30.23■■■□□ 2.43
NEDD4L-237ENST00000617539 COL5A3P25940 1745 aaPredicted RBP30.22■■■□□ 2.43
NEDD4L-237ENST00000617539 KLHL34Q8N239 644 aa30.22■■■□□ 2.43
NEDD4L-237ENST00000617539 FLAD1Q8NFF5 587 aa30.22■■■□□ 2.43
NEDD4L-237ENST00000617539 NPC1L1Q9UHC9 1359 aa30.21■■■□□ 2.43
NEDD4L-237ENST00000617539 SLC4A9Q96Q91 983 aa30.21■■■□□ 2.43
NEDD4L-237ENST00000617539 ATP6V1AP38606 617 aa30.2■■■□□ 2.43
NEDD4L-237ENST00000617539 NLGN2Q8NFZ4 835 aa30.2■■■□□ 2.43
NEDD4L-237ENST00000617539 CHD4Q14839 1912 aa30.2■■■□□ 2.42
NEDD4L-237ENST00000617539 VIRMAQ69YN4 1812 aaKnown RBP30.19■■■□□ 2.42
NEDD4L-237ENST00000617539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.19■■■□□ 2.42
NEDD4L-237ENST00000617539 PHF14O94880 888 aa30.19■■■□□ 2.42
NEDD4L-237ENST00000617539 COL3A1P02461 1466 aaPredicted RBP30.19■■■□□ 2.42
NEDD4L-237ENST00000617539 SSFA2P28290 1259 aa30.16■■■□□ 2.42
NEDD4L-237ENST00000617539 C1orf141Q5JVX7 400 aa30.16■■■□□ 2.42
NEDD4L-237ENST00000617539 CABP4P57796 275 aa30.15■■■□□ 2.42
NEDD4L-237ENST00000617539 GNPATO15228 680 aa30.14■■■□□ 2.42
NEDD4L-237ENST00000617539 HMOX1P09601 288 aa30.14■■■□□ 2.42
NEDD4L-237ENST00000617539 MYH14Q7Z406 1995 aaKnown RBP30.12■■■□□ 2.41
NEDD4L-237ENST00000617539 CICQ96RK0 1608 aaPredicted RBP30.12■■■□□ 2.41
NEDD4L-237ENST00000617539 ADAMTS7Q9UKP4 1686 aa30.12■■■□□ 2.41
NEDD4L-237ENST00000617539 CNGB1Q14028 1251 aaPredicted RBP30.12■■■□□ 2.41
NEDD4L-237ENST00000617539 RBM42Q9BTD8 480 aaKnown RBP30.12■■■□□ 2.41
NEDD4L-237ENST00000617539 TJP1Q07157 1748 aa30.12■■■□□ 2.41
NEDD4L-237ENST00000617539 DIAPH1O60610 1272 aaKnown RBP30.11■■■□□ 2.41
NEDD4L-237ENST00000617539 NFATC2IPQ8NCF5 419 aa30.11■■■□□ 2.41
NEDD4L-237ENST00000617539 MRC1P22897 1456 aa30.1■■■□□ 2.41
NEDD4L-237ENST00000617539 GPR162Q16538 588 aa30.09■■■□□ 2.41
NEDD4L-237ENST00000617539 AKAP4Q5JQC9 854 aa30.09■■■□□ 2.41
NEDD4L-237ENST00000617539 C4AP0C0L4 1744 aa30.08■■■□□ 2.41
NEDD4L-237ENST00000617539 CNTNAP4Q9C0A0 1308 aa30.06■■■□□ 2.4
NEDD4L-237ENST00000617539 LGR6Q9HBX8 967 aa30.06■■■□□ 2.4
NEDD4L-237ENST00000617539 PTCD1O75127 700 aaKnown RBP30.05■■■□□ 2.4
NEDD4L-237ENST00000617539 CD2APQ9Y5K6 639 aa30.05■■■□□ 2.4
NEDD4L-237ENST00000617539 YBX3P16989 372 aaKnown RBP eCLIP30.04■■■□□ 2.4
NEDD4L-237ENST00000617539 MTHFSDQ2M296 383 aaKnown RBP30.04■■■□□ 2.4
NEDD4L-237ENST00000617539 RC3H1Q5TC82 1133 aaKnown RBP30.04■■■□□ 2.4
NEDD4L-237ENST00000617539 PELP1Q8IZL8 1130 aaKnown RBP30.04■■■□□ 2.4
NEDD4L-237ENST00000617539 SLC52A2Q9HAB3 445 aa30.02■■■□□ 2.4
NEDD4L-237ENST00000617539 RTCBQ9Y3I0 505 aaKnown RBP30.02■■■□□ 2.4
NEDD4L-237ENST00000617539 RNMTO43148 476 aaKnown RBP30.01■■■□□ 2.39
NEDD4L-237ENST00000617539 ZNF784Q8NCA9 323 aaPredicted RBP30■■■□□ 2.39
NEDD4L-237ENST00000617539 TRAPPC3LQ5T215 181 aa29.99■■■□□ 2.39
NEDD4L-237ENST00000617539 ARHGEF1Q92888 912 aaKnown RBP29.99■■■□□ 2.39
NEDD4L-237ENST00000617539 KCPQ6ZWJ8 1503 aa29.99■■■□□ 2.39
NEDD4L-237ENST00000617539 KIF13BQ9NQT8 1826 aa29.99■■■□□ 2.39
NEDD4L-237ENST00000617539 RPS6KA4O75676 772 aa29.98■■■□□ 2.39
NEDD4L-237ENST00000617539 UBR2Q8IWV8 1755 aa29.98■■■□□ 2.39
NEDD4L-237ENST00000617539 U2SURPO15042 1029 aaKnown RBP29.97■■■□□ 2.39
NEDD4L-237ENST00000617539 ADRA2BP18089 450 aa29.97■■■□□ 2.39
NEDD4L-237ENST00000617539 CRKLP46109 303 aaKnown RBP29.97■■■□□ 2.39
NEDD4L-237ENST00000617539 KIAA1551Q9HCM1 1747 aa29.96■■■□□ 2.39
NEDD4L-237ENST00000617539 MMP10P09238 476 aa29.95■■■□□ 2.39
NEDD4L-237ENST00000617539 SIPA1L3O60292 1781 aaPredicted RBP29.95■■■□□ 2.38
NEDD4L-237ENST00000617539 SLC39A6Q13433 755 aa29.94■■■□□ 2.38
NEDD4L-237ENST00000617539 GYS1P13807 737 aa29.93■■■□□ 2.38
NEDD4L-237ENST00000617539 PPP2R1AP30153 589 aa29.91■■■□□ 2.38
NEDD4L-237ENST00000617539 INTS5Q6P9B9 1019 aaKnown RBP29.91■■■□□ 2.38
NEDD4L-237ENST00000617539 DNAJC10Q8IXB1 793 aa29.91■■■□□ 2.38
NEDD4L-237ENST00000617539 RFC4P35249 363 aa29.9■■■□□ 2.38
NEDD4L-237ENST00000617539 NLGN1Q8N2Q7 840 aa29.9■■■□□ 2.38
NEDD4L-237ENST00000617539 GRIN3BO60391 1043 aa29.89■■■□□ 2.38
NEDD4L-237ENST00000617539 N4BP2Q86UW6 1770 aaPredicted RBP29.89■■■□□ 2.38
NEDD4L-237ENST00000617539 RSPH6AQ9H0K4 717 aa29.88■■■□□ 2.37
NEDD4L-237ENST00000617539 C10orf71Q711Q0 1435 aa29.88■■■□□ 2.37
NEDD4L-237ENST00000617539 IL17REQ8NFR9 667 aa29.87■■■□□ 2.37
NEDD4L-237ENST00000617539 PHACTR3Q96KR7 559 aa29.87■■■□□ 2.37
NEDD4L-237ENST00000617539 CFAP53Q96M91 514 aa29.87■■■□□ 2.37
NEDD4L-237ENST00000617539 SRP68Q9UHB9 627 aaKnown RBP29.87■■■□□ 2.37
NEDD4L-237ENST00000617539 PXDNLA1KZ92 1463 aa29.87■■■□□ 2.37
NEDD4L-237ENST00000617539 GAS2L2Q8NHY3 880 aa29.86■■■□□ 2.37
NEDD4L-237ENST00000617539 WWC3Q9ULE0 1092 aa29.86■■■□□ 2.37
NEDD4L-237ENST00000617539 USP42Q9H9J4 1324 aaKnown RBP29.86■■■□□ 2.37
NEDD4L-237ENST00000617539 CYP19A1P11511 503 aaPredicted RBP29.85■■■□□ 2.37
NEDD4L-237ENST00000617539 CCDC87Q9NVE4 849 aa29.85■■■□□ 2.37
NEDD4L-237ENST00000617539 GNAT3A8MTJ3 354 aa29.84■■■□□ 2.37
NEDD4L-237ENST00000617539 PRKAR2BP31323 418 aa29.84■■■□□ 2.37
NEDD4L-237ENST00000617539 SOS1Q07889 1333 aaPredicted RBP29.83■■■□□ 2.37
NEDD4L-237ENST00000617539 FKBP8Q14318 412 aa29.82■■■□□ 2.36
NEDD4L-237ENST00000617539 BRCA1P38398 1863 aaKnown RBP29.82■■■□□ 2.36
NEDD4L-237ENST00000617539 CEMIPQ8WUJ3 1361 aa29.81■■■□□ 2.36
NEDD4L-237ENST00000617539 VSIG10Q8N0Z9 540 aa29.8■■■□□ 2.36
NEDD4L-237ENST00000617539 ZBTB1Q9Y2K1 713 aa29.79■■■□□ 2.36
NEDD4L-237ENST00000617539 DDR1Q08345 913 aa29.78■■■□□ 2.36
NEDD4L-237ENST00000617539 NUDCQ9Y266 331 aa29.78■■■□□ 2.36
NEDD4L-237ENST00000617539 U2AF1L5P0DN76 240 aaPredicted RBP29.77■■■□□ 2.36
NEDD4L-237ENST00000617539 U2AF1Q01081 240 aaKnown RBP eCLIP29.77■■■□□ 2.36
NEDD4L-237ENST00000617539 TEFQ10587 303 aa29.77■■■□□ 2.36
NEDD4L-237ENST00000617539 PARP3Q9Y6F1 533 aa29.77■■■□□ 2.36
NEDD4L-237ENST00000617539 COL15A1P39059 1388 aa29.77■■■□□ 2.36
NEDD4L-237ENST00000617539 ZNF496Q96IT1 587 aaPredicted RBP29.76■■■□□ 2.35
NEDD4L-237ENST00000617539 A0A0G2JLW4 131 aa29.75■■■□□ 2.35
NEDD4L-237ENST00000617539 TGFB2P61812 414 aa29.75■■■□□ 2.35
NEDD4L-237ENST00000617539 USPL1Q5W0Q7 1092 aa29.75■■■□□ 2.35
NEDD4L-237ENST00000617539 ZNF790Q6PG37 636 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms