RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CHMP4AQ9BY43 222 aa19.66■□□□□ 0.74
NR1H3-235ENST00000616973 ZNF530Q6P9A1 599 aaPredicted RBP19.66■□□□□ 0.74
NR1H3-235ENST00000616973 LGR6Q9HBX8 967 aa19.64■□□□□ 0.74
NR1H3-235ENST00000616973 AXIN2Q9Y2T1 843 aa19.64■□□□□ 0.74
NR1H3-235ENST00000616973 NPHP3Q7Z494 1330 aa19.64■□□□□ 0.74
NR1H3-235ENST00000616973 EIF4A1P60842 406 aaKnown RBP19.64■□□□□ 0.73
NR1H3-235ENST00000616973 BECN1Q14457 450 aa19.64■□□□□ 0.73
NR1H3-235ENST00000616973 PXDNQ92626 1479 aa19.64■□□□□ 0.73
NR1H3-235ENST00000616973 ERBB3P21860 1342 aa19.64■□□□□ 0.73
NR1H3-235ENST00000616973 F6X3S4 739 aa19.63■□□□□ 0.73
NR1H3-235ENST00000616973 SLC4A3P48751 1232 aa19.63■□□□□ 0.73
NR1H3-235ENST00000616973 NBR1Q14596 966 aa19.63■□□□□ 0.73
NR1H3-235ENST00000616973 STRCQ7RTU9 1775 aa19.63■□□□□ 0.73
NR1H3-235ENST00000616973 TNS3Q68CZ2 1445 aa19.63■□□□□ 0.73
NR1H3-235ENST00000616973 SLC4A10Q6U841 1118 aa19.63■□□□□ 0.73
NR1H3-235ENST00000616973 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
NR1H3-235ENST00000616973 SCN11AQ9UI33 1791 aa19.62■□□□□ 0.73
NR1H3-235ENST00000616973 RNMTO43148 476 aaKnown RBP19.62■□□□□ 0.73
NR1H3-235ENST00000616973 FKBP5Q13451 457 aaPredicted RBP19.62■□□□□ 0.73
NR1H3-235ENST00000616973 C1orf141Q5JVX7 400 aa19.62■□□□□ 0.73
NR1H3-235ENST00000616973 HMMRO75330 724 aa19.61■□□□□ 0.73
NR1H3-235ENST00000616973 TEFQ10587 303 aa19.61■□□□□ 0.73
NR1H3-235ENST00000616973 HDGFL1Q5TGJ6 251 aa19.61■□□□□ 0.73
NR1H3-235ENST00000616973 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
NR1H3-235ENST00000616973 GNAI3P08754 354 aa19.6■□□□□ 0.73
NR1H3-235ENST00000616973 C22orf23Q9BZE7 217 aa19.6■□□□□ 0.73
NR1H3-235ENST00000616973 GNAI2P04899 355 aa19.59■□□□□ 0.73
NR1H3-235ENST00000616973 PLEKHM2Q8IWE5 1019 aa19.59■□□□□ 0.73
NR1H3-235ENST00000616973 BTBD11A6QL63 1104 aa19.59■□□□□ 0.73
NR1H3-235ENST00000616973 MFAP1P55081 439 aaKnown RBP19.59■□□□□ 0.73
NR1H3-235ENST00000616973 MPRIPQ6WCQ1 1025 aa19.59■□□□□ 0.73
NR1H3-235ENST00000616973 HSPA2P54652 639 aa19.58■□□□□ 0.72
NR1H3-235ENST00000616973 ZC3H6P61129 1189 aaKnown RBP19.58■□□□□ 0.72
NR1H3-235ENST00000616973 NECTIN2Q92692 538 aa19.58■□□□□ 0.72
NR1H3-235ENST00000616973 SPATA31A3Q5VYP0 1347 aa19.57■□□□□ 0.72
NR1H3-235ENST00000616973 RTL5Q5HYW3 569 aaPredicted RBP19.57■□□□□ 0.72
NR1H3-235ENST00000616973 HEG1Q9ULI3 1381 aa19.57■□□□□ 0.72
NR1H3-235ENST00000616973 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
NR1H3-235ENST00000616973 PKD1L3Q7Z443 1732 aa19.56■□□□□ 0.72
NR1H3-235ENST00000616973 EIF5BO60841 1220 aaKnown RBP19.56■□□□□ 0.72
NR1H3-235ENST00000616973 CPDO75976 1380 aa19.56■□□□□ 0.72
NR1H3-235ENST00000616973 RBM25P49756 843 aaKnown RBP19.55■□□□□ 0.72
NR1H3-235ENST00000616973 DDX17Q92841 729 aaKnown RBP19.55■□□□□ 0.72
NR1H3-235ENST00000616973 KCNQ3O43525 872 aa19.55■□□□□ 0.72
NR1H3-235ENST00000616973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.55■□□□□ 0.72
NR1H3-235ENST00000616973 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
NR1H3-235ENST00000616973 ATP8B2P98198 1209 aa19.53■□□□□ 0.72
NR1H3-235ENST00000616973 RAPGEF4Q8WZA2 1011 aa19.53■□□□□ 0.72
NR1H3-235ENST00000616973 PHAXQ9H814 394 aaKnown RBP19.53■□□□□ 0.72
NR1H3-235ENST00000616973 CDC45O75419 566 aa19.53■□□□□ 0.72
NR1H3-235ENST00000616973 TUBGCP6Q96RT7 1819 aa19.52■□□□□ 0.72
NR1H3-235ENST00000616973 GSPT1P15170 499 aaKnown RBP19.52■□□□□ 0.72
NR1H3-235ENST00000616973 EIF2S2P20042 333 aaKnown RBP19.52■□□□□ 0.72
NR1H3-235ENST00000616973 TBC1D9Q6ZT07 1266 aa19.52■□□□□ 0.72
NR1H3-235ENST00000616973 TBC1D2Q9BYX2 928 aa19.52■□□□□ 0.72
NR1H3-235ENST00000616973 USP44Q9H0E7 712 aa19.52■□□□□ 0.72
NR1H3-235ENST00000616973 CHPF2Q9P2E5 772 aa19.52■□□□□ 0.72
NR1H3-235ENST00000616973 NLRP2Q9NX02 1062 aa19.51■□□□□ 0.71
NR1H3-235ENST00000616973 GIGYF1O75420 1035 aaPredicted RBP19.51■□□□□ 0.71
NR1H3-235ENST00000616973 TATP17735 454 aaPredicted RBP19.51■□□□□ 0.71
NR1H3-235ENST00000616973 DBF4Q9UBU7 674 aaPredicted RBP19.51■□□□□ 0.71
NR1H3-235ENST00000616973 SPG7Q9UQ90 795 aa19.51■□□□□ 0.71
NR1H3-235ENST00000616973 MEGF6O75095 1541 aa19.5■□□□□ 0.71
NR1H3-235ENST00000616973 C16orf71Q8IYS4 520 aaPredicted RBP19.5■□□□□ 0.71
NR1H3-235ENST00000616973 SRCIN1Q9C0H9 1055 aa19.5■□□□□ 0.71
NR1H3-235ENST00000616973 BRINP3Q76B58 766 aa19.49■□□□□ 0.71
NR1H3-235ENST00000616973 OSBPL3Q9H4L5 887 aa19.49■□□□□ 0.71
NR1H3-235ENST00000616973 KDM6AO15550 1401 aaPredicted RBP19.49■□□□□ 0.71
NR1H3-235ENST00000616973 PARP4Q9UKK3 1724 aaKnown RBP19.49■□□□□ 0.71
NR1H3-235ENST00000616973 MRC1P22897 1456 aa19.49■□□□□ 0.71
NR1H3-235ENST00000616973 UBTFL1P0CB47 393 aaPredicted RBP19.49■□□□□ 0.71
NR1H3-235ENST00000616973 DNAAF4Q8WXU2 420 aa19.49■□□□□ 0.71
NR1H3-235ENST00000616973 SMARCA5O60264 1052 aaPredicted RBP19.48■□□□□ 0.71
NR1H3-235ENST00000616973 CABLES1Q8TDN4 633 aa19.48■□□□□ 0.71
NR1H3-235ENST00000616973 ABCA3Q99758 1704 aa19.48■□□□□ 0.71
NR1H3-235ENST00000616973 C5P01031 1676 aa19.48■□□□□ 0.71
NR1H3-235ENST00000616973 PHKG2P15735 406 aa19.47■□□□□ 0.71
NR1H3-235ENST00000616973 NFKBIBQ15653 356 aa19.47■□□□□ 0.71
NR1H3-235ENST00000616973 LRRFIP2Q9Y608 721 aaKnown RBP19.47■□□□□ 0.71
NR1H3-235ENST00000616973 IBTKQ9P2D0 1353 aaPredicted RBP19.47■□□□□ 0.71
NR1H3-235ENST00000616973 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
NR1H3-235ENST00000616973 BEND3Q5T5X7 828 aa19.47■□□□□ 0.71
NR1H3-235ENST00000616973 OTUD7AQ8TE49 926 aaPredicted RBP19.47■□□□□ 0.71
NR1H3-235ENST00000616973 ADCY9O60503 1353 aa19.46■□□□□ 0.71
NR1H3-235ENST00000616973 PNMA6EA0A0J9YXQ4 647 aa19.46■□□□□ 0.71
NR1H3-235ENST00000616973 SLC52A2Q9HAB3 445 aa19.46■□□□□ 0.71
NR1H3-235ENST00000616973 SOS2Q07890 1332 aaPredicted RBP19.46■□□□□ 0.71
NR1H3-235ENST00000616973 CSB-PGBD3P0DP91 1061 aa19.45■□□□□ 0.7
NR1H3-235ENST00000616973 IFNL2Q8IZJ0 200 aa19.45■□□□□ 0.7
NR1H3-235ENST00000616973 SSH3Q8TE77 659 aa19.45■□□□□ 0.7
NR1H3-235ENST00000616973 ANTXR1Q9H6X2 564 aa19.45■□□□□ 0.7
NR1H3-235ENST00000616973 PI4KAP2A4QPH2 592 aa19.45■□□□□ 0.7
NR1H3-235ENST00000616973 PI4KAP1Q8N8J0 262 aa19.45■□□□□ 0.7
NR1H3-235ENST00000616973 SNX21Q969T3 373 aa19.45■□□□□ 0.7
NR1H3-235ENST00000616973 LRRCC1Q9C099 1032 aa19.45■□□□□ 0.7
NR1H3-235ENST00000616973 SALL3Q9BXA9 1300 aa19.45■□□□□ 0.7
NR1H3-235ENST00000616973 APBB1O00213 710 aa19.44■□□□□ 0.7
NR1H3-235ENST00000616973 CHRNA2Q15822 529 aa19.44■□□□□ 0.7
NR1H3-235ENST00000616973 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
NR1H3-235ENST00000616973 PDE1AP54750 535 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms