RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 PTGER2P43116 358 aa29.67■■■□□ 2.34
CBWD3-212ENST00000616550 MSH5O43196 834 aa29.66■■■□□ 2.34
CBWD3-212ENST00000616550 U2AF1L5P0DN76 240 aaPredicted RBP29.66■■■□□ 2.34
CBWD3-212ENST00000616550 U2AF1Q01081 240 aaKnown RBP eCLIP29.66■■■□□ 2.34
CBWD3-212ENST00000616550 AK7Q96M32 723 aa29.66■■■□□ 2.34
CBWD3-212ENST00000616550 RBM42Q9BTD8 480 aaKnown RBP29.66■■■□□ 2.34
CBWD3-212ENST00000616550 LGR6Q9HBX8 967 aa29.66■■■□□ 2.34
CBWD3-212ENST00000616550 RNMTO43148 476 aaKnown RBP29.65■■■□□ 2.34
CBWD3-212ENST00000616550 GAS2L2Q8NHY3 880 aa29.65■■■□□ 2.34
CBWD3-212ENST00000616550 FLAD1Q8NFF5 587 aa29.64■■■□□ 2.34
CBWD3-212ENST00000616550 C4BP0C0L5 1744 aa29.64■■■□□ 2.34
CBWD3-212ENST00000616550 PRKAR2BP31323 418 aa29.63■■■□□ 2.33
CBWD3-212ENST00000616550 RALBP1Q15311 655 aa29.63■■■□□ 2.33
CBWD3-212ENST00000616550 COL23A1Q86Y22 540 aaPredicted RBP29.63■■■□□ 2.33
CBWD3-212ENST00000616550 LINC00116Q8NCU8 138 aa29.63■■■□□ 2.33
CBWD3-212ENST00000616550 RSPH6AQ9H0K4 717 aa29.63■■■□□ 2.33
CBWD3-212ENST00000616550 SLC52A2Q9HAB3 445 aa29.63■■■□□ 2.33
CBWD3-212ENST00000616550 VIRMAQ69YN4 1812 aaKnown RBP29.62■■■□□ 2.33
CBWD3-212ENST00000616550 ITPK1Q13572 414 aa29.62■■■□□ 2.33
CBWD3-212ENST00000616550 FCHSD2O94868 740 aa29.61■■■□□ 2.33
CBWD3-212ENST00000616550 SGIP1Q9BQI5 828 aa29.6■■■□□ 2.33
CBWD3-212ENST00000616550 GNAT3A8MTJ3 354 aa29.59■■■□□ 2.33
CBWD3-212ENST00000616550 PTCD1O75127 700 aaKnown RBP29.58■■■□□ 2.33
CBWD3-212ENST00000616550 POLD1P28340 1107 aa29.58■■■□□ 2.33
CBWD3-212ENST00000616550 PHACTR3Q96KR7 559 aa29.58■■■□□ 2.33
CBWD3-212ENST00000616550 MAP3K5Q99683 1374 aa29.57■■■□□ 2.32
CBWD3-212ENST00000616550 SLC4A9Q96Q91 983 aa29.57■■■□□ 2.32
CBWD3-212ENST00000616550 ZNF831Q5JPB2 1677 aa29.56■■■□□ 2.32
CBWD3-212ENST00000616550 ARXQ96QS3 562 aa29.56■■■□□ 2.32
CBWD3-212ENST00000616550 UBR3Q6ZT12 1888 aa29.55■■■□□ 2.32
CBWD3-212ENST00000616550 PHF14O94880 888 aa29.55■■■□□ 2.32
CBWD3-212ENST00000616550 ADAMTS7Q9UKP4 1686 aa29.54■■■□□ 2.32
CBWD3-212ENST00000616550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.54■■■□□ 2.32
CBWD3-212ENST00000616550 GNPATO15228 680 aa29.54■■■□□ 2.32
CBWD3-212ENST00000616550 SSFA2P28290 1259 aa29.54■■■□□ 2.32
CBWD3-212ENST00000616550 MRC1P22897 1456 aa29.54■■■□□ 2.32
CBWD3-212ENST00000616550 TEFQ10587 303 aa29.52■■■□□ 2.32
CBWD3-212ENST00000616550 AMIGO3Q86WK7 504 aa29.52■■■□□ 2.32
CBWD3-212ENST00000616550 NEFMP07197 916 aa29.51■■■□□ 2.31
CBWD3-212ENST00000616550 SLC39A6Q13433 755 aa29.51■■■□□ 2.31
CBWD3-212ENST00000616550 RC3H1Q5TC82 1133 aaKnown RBP29.51■■■□□ 2.31
CBWD3-212ENST00000616550 IL17REQ8NFR9 667 aa29.51■■■□□ 2.31
CBWD3-212ENST00000616550 FHDC1Q9C0D6 1143 aaPredicted RBP29.51■■■□□ 2.31
CBWD3-212ENST00000616550 COL24A1Q17RW2 1714 aa29.51■■■□□ 2.31
CBWD3-212ENST00000616550 SMIM5Q71RC9 77 aa29.5■■■□□ 2.31
CBWD3-212ENST00000616550 RTCBQ9Y3I0 505 aaKnown RBP29.5■■■□□ 2.31
CBWD3-212ENST00000616550 MSL1Q68DK7 614 aa29.49■■■□□ 2.31
CBWD3-212ENST00000616550 MYBBP1AQ9BQG0 1328 aaKnown RBP29.48■■■□□ 2.31
CBWD3-212ENST00000616550 SYT17Q9BSW7 474 aa29.48■■■□□ 2.31
CBWD3-212ENST00000616550 COL5A3P25940 1745 aaPredicted RBP29.48■■■□□ 2.31
CBWD3-212ENST00000616550 CNTNAP4Q9C0A0 1308 aa29.47■■■□□ 2.31
CBWD3-212ENST00000616550 DCAF8L1A6NGE4 600 aa29.47■■■□□ 2.31
CBWD3-212ENST00000616550 RTF1Q92541 710 aaKnown RBP29.47■■■□□ 2.31
CBWD3-212ENST00000616550 PNNQ9H307 717 aaKnown RBP29.47■■■□□ 2.31
CBWD3-212ENST00000616550 TRAPPC3LQ5T215 181 aa29.46■■■□□ 2.31
CBWD3-212ENST00000616550 TTC5Q8N0Z6 440 aa29.45■■■□□ 2.31
CBWD3-212ENST00000616550 RPS6KA4O75676 772 aa29.44■■■□□ 2.3
CBWD3-212ENST00000616550 CEMIPQ8WUJ3 1361 aa29.43■■■□□ 2.3
CBWD3-212ENST00000616550 CRKLP46109 303 aaKnown RBP29.43■■■□□ 2.3
CBWD3-212ENST00000616550 KLHL34Q8N239 644 aa29.43■■■□□ 2.3
CBWD3-212ENST00000616550 MYH14Q7Z406 1995 aaKnown RBP29.43■■■□□ 2.3
CBWD3-212ENST00000616550 ADRA2BP18089 450 aa29.42■■■□□ 2.3
CBWD3-212ENST00000616550 DNAJC10Q8IXB1 793 aa29.42■■■□□ 2.3
CBWD3-212ENST00000616550 HTATSF1O43719 755 aaKnown RBP29.41■■■□□ 2.3
CBWD3-212ENST00000616550 TJP1Q07157 1748 aa29.41■■■□□ 2.3
CBWD3-212ENST00000616550 VSIG10Q8N0Z9 540 aa29.41■■■□□ 2.3
CBWD3-212ENST00000616550 SIPA1L3O60292 1781 aaPredicted RBP29.4■■■□□ 2.3
CBWD3-212ENST00000616550 ZNF790Q6PG37 636 aa29.4■■■□□ 2.3
CBWD3-212ENST00000616550 PLEKHF1Q96S99 279 aa29.4■■■□□ 2.3
CBWD3-212ENST00000616550 CICQ96RK0 1608 aaPredicted RBP29.4■■■□□ 2.3
CBWD3-212ENST00000616550 KCPQ6ZWJ8 1503 aa29.4■■■□□ 2.3
CBWD3-212ENST00000616550 RFC4P35249 363 aa29.39■■■□□ 2.3
CBWD3-212ENST00000616550 MCM10Q7L590 875 aa29.39■■■□□ 2.3
CBWD3-212ENST00000616550 ARHGEF1Q92888 912 aaKnown RBP29.39■■■□□ 2.3
CBWD3-212ENST00000616550 BTBD11A6QL63 1104 aa29.38■■■□□ 2.29
CBWD3-212ENST00000616550 PRKRIP1Q9H875 184 aaPredicted RBP29.38■■■□□ 2.29
CBWD3-212ENST00000616550 MAPK8IP3Q9UPT6 1336 aa29.38■■■□□ 2.29
CBWD3-212ENST00000616550 UBR2Q8IWV8 1755 aa29.37■■■□□ 2.29
CBWD3-212ENST00000616550 ZNF316A6NFI3 1004 aaPredicted RBP29.36■■■□□ 2.29
CBWD3-212ENST00000616550 INTS5Q6P9B9 1019 aaKnown RBP29.36■■■□□ 2.29
CBWD3-212ENST00000616550 CCDC87Q9NVE4 849 aa29.36■■■□□ 2.29
CBWD3-212ENST00000616550 CYP19A1P11511 503 aaPredicted RBP29.35■■■□□ 2.29
CBWD3-212ENST00000616550 DCTN1Q14203 1278 aa29.35■■■□□ 2.29
CBWD3-212ENST00000616550 ZNF496Q96IT1 587 aaPredicted RBP29.35■■■□□ 2.29
CBWD3-212ENST00000616550 NFE2L2Q16236 605 aa29.34■■■□□ 2.29
CBWD3-212ENST00000616550 DLG5Q8TDM6 1919 aa29.33■■■□□ 2.29
CBWD3-212ENST00000616550 FMNL2Q96PY5 1086 aa29.33■■■□□ 2.29
CBWD3-212ENST00000616550 STARD3NLO95772 234 aa29.32■■■□□ 2.28
CBWD3-212ENST00000616550 NLGN1Q8N2Q7 840 aa29.32■■■□□ 2.28
CBWD3-212ENST00000616550 TEX13AQ9BXU3 409 aaPredicted RBP29.32■■■□□ 2.28
CBWD3-212ENST00000616550 HEG1Q9ULI3 1381 aa29.31■■■□□ 2.28
CBWD3-212ENST00000616550 WDR43Q15061 677 aaKnown RBP eCLIP29.3■■■□□ 2.28
CBWD3-212ENST00000616550 KCNQ3O43525 872 aa29.29■■■□□ 2.28
CBWD3-212ENST00000616550 TAF7Q15545 349 aaPredicted RBP29.29■■■□□ 2.28
CBWD3-212ENST00000616550 CD2APQ9Y5K6 639 aa29.29■■■□□ 2.28
CBWD3-212ENST00000616550 MMP10P09238 476 aa29.28■■■□□ 2.28
CBWD3-212ENST00000616550 GYS1P13807 737 aa29.28■■■□□ 2.28
CBWD3-212ENST00000616550 C4AP0C0L4 1744 aa29.28■■■□□ 2.28
CBWD3-212ENST00000616550 SOS1Q07889 1333 aaPredicted RBP29.27■■■□□ 2.28
CBWD3-212ENST00000616550 NLGN2Q8NFZ4 835 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms