RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 IQCEQ6IPM2 695 aa10.9□□□□□ -0.66
SH3GLB1-205ENST00000616170 TMC6Q7Z403 805 aa10.9□□□□□ -0.66
SH3GLB1-205ENST00000616170 TICAM2Q86XR7 235 aa10.9□□□□□ -0.66
SH3GLB1-205ENST00000616170 TOP1P11387 765 aaKnown RBP10.9□□□□□ -0.67
SH3GLB1-205ENST00000616170 IPO4Q8TEX9 1081 aaKnown RBP10.9□□□□□ -0.67
SH3GLB1-205ENST00000616170 SUPT6HQ7KZ85 1726 aaKnown RBP10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 GIMAP6Q6P9H5 292 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 HCLS1P14317 486 aaPredicted RBP10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 ATP2B2Q01814 1243 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 CEP135Q66GS9 1140 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 KIF6Q6ZMV9 814 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 CCDC85AQ96PX6 553 aaPredicted RBP10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 F6X3S4 739 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 ZSCAN12O43309 604 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 TRIM27P14373 513 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 GJB2P29033 226 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 PLEKHO1Q53GL0 409 aaPredicted RBP10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 JAKMIP3Q5VZ66 844 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 ZSWIM4Q9H7M6 989 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 DAPK1P53355 1430 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 ANKRD30BQ9BXX2 1392 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 KIF5CO60282 957 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 LMAN1P49257 510 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 RNF187Q5TA31 235 aaPredicted RBP10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 BOLA2Q9H3K6 86 aa10.89□□□□□ -0.67
SH3GLB1-205ENST00000616170 IGSF3O75054 1194 aa10.88□□□□□ -0.67
SH3GLB1-205ENST00000616170 SSBP05455 408 aaKnown RBP eCLIP10.88□□□□□ -0.67
SH3GLB1-205ENST00000616170 NFE2L2Q16236 605 aa10.88□□□□□ -0.67
SH3GLB1-205ENST00000616170 KIF2AO00139 706 aaPredicted RBP10.88□□□□□ -0.67
SH3GLB1-205ENST00000616170 LUC7LQ9NQ29 371 aaKnown RBP10.88□□□□□ -0.67
SH3GLB1-205ENST00000616170 SPG7Q9UQ90 795 aa10.88□□□□□ -0.67
SH3GLB1-205ENST00000616170 CCDC113Q9H0I3 377 aa10.88□□□□□ -0.67
SH3GLB1-205ENST00000616170 BCCIPQ9P287 314 aaKnown RBP eCLIP10.88□□□□□ -0.67
SH3GLB1-205ENST00000616170 AQRO60306 1485 aaKnown RBP eCLIP10.88□□□□□ -0.674e-6■□□□□ 10.8
SH3GLB1-205ENST00000616170 NOL7Q9UMY1 257 aaKnown RBP10.88□□□□□ -0.67
SH3GLB1-205ENST00000616170 KLHL40Q2TBA0 621 aa10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 LRSAM1Q6UWE0 723 aa10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 SLC3A2P08195 630 aaKnown RBP10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 KRT32Q14532 448 aa10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 PLEKHH2Q8IVE3 1493 aa10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 CCT2P78371 535 aaKnown RBP10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 SNW1Q13573 536 aaKnown RBP10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 RAB11FIP3O75154 756 aa10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 CDKL5O76039 1030 aa10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 SCAND2PQ9GZW5 306 aaPredicted RBP10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 V9GYY5 206 aaPredicted RBP10.87□□□□□ -0.67
SH3GLB1-205ENST00000616170 NAIPQ13075 1403 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 BTBD11A6QL63 1104 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 C8orf34Q49A92 452 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 GBP3Q9H0R5 595 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 STX6O43752 255 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 FCHSD2O94868 740 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 TDO2P48775 406 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 NOLC1Q14978 699 aaKnown RBP eCLIP10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 FSIP1Q8NA03 581 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 LIG1P18858 919 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 ZNF530Q6P9A1 599 aaPredicted RBP10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 SRRTQ9BXP5 876 aaKnown RBP10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 LIMCH1Q9UPQ0 1083 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 MCM5P33992 734 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 TAF4BQ92750 862 aa10.86□□□□□ -0.67
SH3GLB1-205ENST00000616170 PRG4Q92954 1404 aaPredicted RBP10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 TMEM132AQ24JP5 1023 aa10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 ESCO1Q5FWF5 840 aa10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 CCDC82Q8N4S0 544 aa10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 NACAP1Q9BZK3 213 aa10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 CCDC8Q9H0W5 538 aaPredicted RBP10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 CNPY2Q9Y2B0 182 aa10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 ZRSR2Q15696 482 aaKnown RBP10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 KIF1BPQ96EK5 621 aa10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 PLEKHH1Q9ULM0 1364 aa10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 CCDC57Q2TAC2 916 aa10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 PRIMPOLQ96LW4 560 aa10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 NUP88Q99567 741 aaPredicted RBP10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 IMMTQ16891 758 aaKnown RBP10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 TTC12Q9H892 705 aaPredicted RBP10.85□□□□□ -0.67
SH3GLB1-205ENST00000616170 UBAC1Q9BSL1 405 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 GOPCQ9HD26 462 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 NCOA1Q15788 1441 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 IDH1O75874 414 aaKnown RBP10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 PRIM1P49642 420 aaKnown RBP10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 MAP9Q49MG5 647 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 TXLNBQ8N3L3 684 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 DYDC1Q8WWB3 177 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 TIGD1Q96MW7 591 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 MAP2K1Q02750 393 aaPredicted RBP10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 SPA17Q15506 151 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 ZNF165P49910 485 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 STX1AQ16623 288 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 CCDC178Q5BJE1 867 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 ZNF397Q8NF99 534 aaPredicted RBP10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 C8orf76Q96K31 380 aa10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 SH2B1Q9NRF2 756 aaPredicted RBP10.84□□□□□ -0.67
SH3GLB1-205ENST00000616170 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 GOLGA6L10A0A0M3HER8 536 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 CABP4P57796 275 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 RAB11FIP4Q86YS3 637 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms