RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.251e-9■□□□□ 11.2
SNX9-202ENST00000614703 RTCBQ9Y3I0 505 aaKnown RBP13.47□□□□□ -0.25
SNX9-202ENST00000614703 N4BP2Q86UW6 1770 aaPredicted RBP13.47□□□□□ -0.25
SNX9-202ENST00000614703 PCNTO95613 3336 aa13.46□□□□□ -0.25
SNX9-202ENST00000614703 FCHSD2O94868 740 aa13.46□□□□□ -0.25
SNX9-202ENST00000614703 ADRA2BP18089 450 aa13.46□□□□□ -0.25
SNX9-202ENST00000614703 JMYQ8N9B5 988 aa13.46□□□□□ -0.25
SNX9-202ENST00000614703 GGNBP2Q9H3C7 697 aa13.46□□□□□ -0.25
SNX9-202ENST00000614703 TESK2Q96S53 571 aa13.45□□□□□ -0.26
SNX9-202ENST00000614703 NMRK2Q9NPI5 230 aa13.45□□□□□ -0.26
SNX9-202ENST00000614703 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
SNX9-202ENST00000614703 KIF20BQ96Q89 1820 aa13.45□□□□□ -0.26
SNX9-202ENST00000614703 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
SNX9-202ENST00000614703 C10orf71Q711Q0 1435 aa13.45□□□□□ -0.26
SNX9-202ENST00000614703 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
SNX9-202ENST00000614703 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
SNX9-202ENST00000614703 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
SNX9-202ENST00000614703 A0A0G2JLW4 131 aa13.44□□□□□ -0.26
SNX9-202ENST00000614703 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
SNX9-202ENST00000614703 BRCA1P38398 1863 aaKnown RBP13.43□□□□□ -0.26
SNX9-202ENST00000614703 ITPK1Q13572 414 aa13.43□□□□□ -0.26
SNX9-202ENST00000614703 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
SNX9-202ENST00000614703 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
SNX9-202ENST00000614703 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
SNX9-202ENST00000614703 SMIM5Q71RC9 77 aa13.43□□□□□ -0.26
SNX9-202ENST00000614703 TNS4Q8IZW8 715 aa13.43□□□□□ -0.26
SNX9-202ENST00000614703 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
SNX9-202ENST00000614703 NCAPD2Q15021 1401 aa13.42□□□□□ -0.26
SNX9-202ENST00000614703 RFC4P35249 363 aa13.42□□□□□ -0.26
SNX9-202ENST00000614703 PRELPP51888 382 aa13.42□□□□□ -0.26
SNX9-202ENST00000614703 COL13A1Q5TAT6 717 aaPredicted RBP13.42□□□□□ -0.26
SNX9-202ENST00000614703 PIM2Q9P1W9 311 aa13.42□□□□□ -0.26
SNX9-202ENST00000614703 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
SNX9-202ENST00000614703 ZNF831Q5JPB2 1677 aa13.42□□□□□ -0.26
SNX9-202ENST00000614703 TNRC6CQ9HCJ0 1690 aaKnown RBP13.42□□□□□ -0.26
SNX9-202ENST00000614703 DPEP1P16444 411 aa13.41□□□□□ -0.26
SNX9-202ENST00000614703 CAPN15O75808 1086 aa13.4□□□□□ -0.26
SNX9-202ENST00000614703 HSP90AB1P08238 724 aaKnown RBP13.4□□□□□ -0.26
SNX9-202ENST00000614703 DALRD3Q5D0E6 543 aaKnown RBP13.4□□□□□ -0.26
SNX9-202ENST00000614703 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
SNX9-202ENST00000614703 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
SNX9-202ENST00000614703 ZC3H4Q9UPT8 1303 aaKnown RBP13.39□□□□□ -0.27
SNX9-202ENST00000614703 PHKG2P15735 406 aa13.39□□□□□ -0.27
SNX9-202ENST00000614703 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
SNX9-202ENST00000614703 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
SNX9-202ENST00000614703 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
SNX9-202ENST00000614703 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
SNX9-202ENST00000614703 PPM1GO15355 546 aaPredicted RBP13.38□□□□□ -0.27
SNX9-202ENST00000614703 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
SNX9-202ENST00000614703 GYS1P13807 737 aa13.38□□□□□ -0.27
SNX9-202ENST00000614703 DCAF5Q96JK2 942 aa13.38□□□□□ -0.27
SNX9-202ENST00000614703 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
SNX9-202ENST00000614703 EMILIN1Q9Y6C2 1016 aa13.38□□□□□ -0.27
SNX9-202ENST00000614703 KCPQ6ZWJ8 1503 aa13.38□□□□□ -0.27
SNX9-202ENST00000614703 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
SNX9-202ENST00000614703 KDRP35968 1356 aa13.37□□□□□ -0.27
SNX9-202ENST00000614703 COL5A3P25940 1745 aaPredicted RBP13.37□□□□□ -0.27
SNX9-202ENST00000614703 ANKRD26Q9UPS8 1709 aa13.37□□□□□ -0.27
SNX9-202ENST00000614703 RRAGCQ9HB90 399 aa13.37□□□□□ -0.27
SNX9-202ENST00000614703 KCNA3P22001 575 aa13.36□□□□□ -0.27
SNX9-202ENST00000614703 HTRA3P83110 453 aa13.36□□□□□ -0.27
SNX9-202ENST00000614703 EYA1Q99502 592 aa13.36□□□□□ -0.27
SNX9-202ENST00000614703 SBF1O95248 1867 aa13.36□□□□□ -0.27
SNX9-202ENST00000614703 VEGFAP15692 232 aaPredicted RBP13.33□□□□□ -0.28
SNX9-202ENST00000614703 CABP4P57796 275 aa13.32□□□□□ -0.28
SNX9-202ENST00000614703 PLEKHO1Q53GL0 409 aaPredicted RBP13.32□□□□□ -0.28
SNX9-202ENST00000614703 SLC4A9Q96Q91 983 aa13.32□□□□□ -0.28
SNX9-202ENST00000614703 MYH14Q7Z406 1995 aaKnown RBP13.32□□□□□ -0.28
SNX9-202ENST00000614703 GLTPD2A6NH11 291 aa13.31□□□□□ -0.28
SNX9-202ENST00000614703 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
SNX9-202ENST00000614703 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
SNX9-202ENST00000614703 LMNB1P20700 586 aa13.31□□□□□ -0.28
SNX9-202ENST00000614703 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
SNX9-202ENST00000614703 USP42Q9H9J4 1324 aaKnown RBP13.31□□□□□ -0.28
SNX9-202ENST00000614703 ZPR1O75312 459 aa13.3□□□□□ -0.28
SNX9-202ENST00000614703 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
SNX9-202ENST00000614703 FKBP8Q14318 412 aa13.29□□□□□ -0.28
SNX9-202ENST00000614703 KDM6AO15550 1401 aaPredicted RBP13.29□□□□□ -0.28
SNX9-202ENST00000614703 PTCD1O75127 700 aaKnown RBP13.28□□□□□ -0.28
SNX9-202ENST00000614703 CHRNA5P30532 468 aa13.28□□□□□ -0.28
SNX9-202ENST00000614703 MTHFSP49914 203 aa13.28□□□□□ -0.28
SNX9-202ENST00000614703 DDR1Q08345 913 aa13.28□□□□□ -0.28
SNX9-202ENST00000614703 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
SNX9-202ENST00000614703 C1orf141Q5JVX7 400 aa13.28□□□□□ -0.28
SNX9-202ENST00000614703 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
SNX9-202ENST00000614703 ZNF530Q6P9A1 599 aaPredicted RBP13.28□□□□□ -0.28
SNX9-202ENST00000614703 CARD14Q9BXL6 1004 aa13.28□□□□□ -0.28
SNX9-202ENST00000614703 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
SNX9-202ENST00000614703 POLRMTO00411 1230 aaKnown RBP13.27□□□□□ -0.29
SNX9-202ENST00000614703 TM4SF1P30408 202 aa13.27□□□□□ -0.29
SNX9-202ENST00000614703 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.29
SNX9-202ENST00000614703 CCDC88AQ3V6T2 1871 aa13.26□□□□□ -0.29
SNX9-202ENST00000614703 TTLL6Q8N841 843 aa13.26□□□□□ -0.29
SNX9-202ENST00000614703 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
SNX9-202ENST00000614703 RASSF7Q02833 373 aa13.25□□□□□ -0.29
SNX9-202ENST00000614703 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
SNX9-202ENST00000614703 DLEC1Q9Y238 1755 aa13.25□□□□□ -0.29
SNX9-202ENST00000614703 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
SNX9-202ENST00000614703 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
SNX9-202ENST00000614703 AFDNP55196 1824 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms