RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-222ENST00000613916 ERBB3P21860 1342 aa9.57□□□□□ -0.88
PVT1-222ENST00000613916 NEFMP07197 916 aa9.57□□□□□ -0.88
PVT1-222ENST00000613916 MTHFSDQ2M296 383 aaKnown RBP9.57□□□□□ -0.88
PVT1-222ENST00000613916 THUMPD2Q9BTF0 503 aaKnown RBP9.57□□□□□ -0.88
PVT1-222ENST00000613916 KDM3BQ7LBC6 1761 aa9.56□□□□□ -0.88
PVT1-222ENST00000613916 NHSQ6T4R5 1651 aa9.56□□□□□ -0.88
PVT1-222ENST00000613916 ZNF853P0CG23 659 aa9.56□□□□□ -0.88
PVT1-222ENST00000613916 FKBP8Q14318 412 aa9.56□□□□□ -0.88
PVT1-222ENST00000613916 SLC15A2Q16348 729 aa9.56□□□□□ -0.88
PVT1-222ENST00000613916 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
PVT1-222ENST00000613916 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
PVT1-222ENST00000613916 FANCIQ9NVI1 1328 aa9.56□□□□□ -0.88
PVT1-222ENST00000613916 DCTN1Q14203 1278 aa9.55□□□□□ -0.88
PVT1-222ENST00000613916 TXNRD1Q16881 649 aa9.55□□□□□ -0.88
PVT1-222ENST00000613916 STK32BQ9NY57 414 aa9.55□□□□□ -0.88
PVT1-222ENST00000613916 QSER1Q2KHR3 1735 aa9.55□□□□□ -0.88
PVT1-222ENST00000613916 RRP1P56182 461 aaKnown RBP9.54□□□□□ -0.88
PVT1-222ENST00000613916 IRX6P78412 446 aaPredicted RBP9.54□□□□□ -0.88
PVT1-222ENST00000613916 LMOD3Q0VAK6 560 aa9.54□□□□□ -0.88
PVT1-222ENST00000613916 DDB1Q16531 1140 aa9.54□□□□□ -0.88
PVT1-222ENST00000613916 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
PVT1-222ENST00000613916 TSR2Q969E8 191 aaKnown RBP9.54□□□□□ -0.88
PVT1-222ENST00000613916 ARXQ96QS3 562 aa9.54□□□□□ -0.88
PVT1-222ENST00000613916 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
PVT1-222ENST00000613916 MEGF6O75095 1541 aa9.53□□□□□ -0.88
PVT1-222ENST00000613916 NEFLP07196 543 aa9.53□□□□□ -0.88
PVT1-222ENST00000613916 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
PVT1-222ENST00000613916 HTATSF1O43719 755 aaKnown RBP9.52□□□□□ -0.89
PVT1-222ENST00000613916 EXOSC9Q06265 439 aaKnown RBP9.52□□□□□ -0.89
PVT1-222ENST00000613916 TNS2Q63HR2 1409 aa9.52□□□□□ -0.89
PVT1-222ENST00000613916 MCM10Q7L590 875 aa9.52□□□□□ -0.89
PVT1-222ENST00000613916 CDCA7Q9BWT1 371 aaPredicted RBP9.52□□□□□ -0.89
PVT1-222ENST00000613916 IFT57Q9NWB7 429 aa9.52□□□□□ -0.89
PVT1-222ENST00000613916 WDR17Q8IZU2 1322 aa9.52□□□□□ -0.89
PVT1-222ENST00000613916 GNAT3A8MTJ3 354 aa9.51□□□□□ -0.89
PVT1-222ENST00000613916 GNAI1P63096 354 aa9.51□□□□□ -0.89
PVT1-222ENST00000613916 CALD1Q05682 793 aaKnown RBP9.51□□□□□ -0.89
PVT1-222ENST00000613916 IL17REQ8NFR9 667 aa9.51□□□□□ -0.89
PVT1-222ENST00000613916 CFAP44Q96MT7 982 aa9.51□□□□□ -0.89
PVT1-222ENST00000613916 MBIPQ9NS73 344 aa9.51□□□□□ -0.89
PVT1-222ENST00000613916 NLRP2Q9NX02 1062 aa9.51□□□□□ -0.89
PVT1-222ENST00000613916 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
PVT1-222ENST00000613916 PLEKHG2Q9H7P9 1386 aa9.5□□□□□ -0.89
PVT1-222ENST00000613916 ITGB4P16144 1822 aa9.5□□□□□ -0.89
PVT1-222ENST00000613916 CHL1O00533 1208 aa9.5□□□□□ -0.89
PVT1-222ENST00000613916 PLIN1O60240 522 aa9.5□□□□□ -0.89
PVT1-222ENST00000613916 BCAR3O75815 825 aa9.5□□□□□ -0.89
PVT1-222ENST00000613916 RARSP54136 660 aaKnown RBP9.5□□□□□ -0.89
PVT1-222ENST00000613916 GPR162Q16538 588 aa9.5□□□□□ -0.89
PVT1-222ENST00000613916 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
PVT1-222ENST00000613916 KAT6BQ8WYB5 2073 aa9.5□□□□□ -0.89
PVT1-222ENST00000613916 TOGARAM1Q9Y4F4 1720 aa9.49□□□□□ -0.89
PVT1-222ENST00000613916 CT47B1P0C2W7 299 aaPredicted RBP9.49□□□□□ -0.89
PVT1-222ENST00000613916 CSB-PGBD3P0DP91 1061 aa9.49□□□□□ -0.89
PVT1-222ENST00000613916 AMOTQ4VCS5 1084 aa9.49□□□□□ -0.89
PVT1-222ENST00000613916 ERICH6BQ5W0A0 696 aa9.49□□□□□ -0.89
PVT1-222ENST00000613916 ZNF530Q6P9A1 599 aaPredicted RBP9.49□□□□□ -0.89
PVT1-222ENST00000613916 LAS1LQ9Y4W2 734 aaKnown RBP9.49□□□□□ -0.89
PVT1-222ENST00000613916 BTAF1O14981 1849 aa9.48□□□□□ -0.89
PVT1-222ENST00000613916 AKAP4Q5JQC9 854 aa9.48□□□□□ -0.89
PVT1-222ENST00000613916 C20orf194Q5TEA3 1177 aa9.48□□□□□ -0.89
PVT1-222ENST00000613916 TSPYL6Q8N831 410 aa9.48□□□□□ -0.89
PVT1-222ENST00000613916 RTF1Q92541 710 aaKnown RBP9.48□□□□□ -0.89
PVT1-222ENST00000613916 CARD10Q9BWT7 1032 aa9.48□□□□□ -0.89
PVT1-222ENST00000613916 LGR6Q9HBX8 967 aa9.48□□□□□ -0.89
PVT1-222ENST00000613916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.48□□□□□ -0.89
PVT1-222ENST00000613916 ADCY9O60503 1353 aa9.48□□□□□ -0.89
PVT1-222ENST00000613916 ATP10DQ9P241 1426 aa9.48□□□□□ -0.89
PVT1-222ENST00000613916 VAMP4O75379 141 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 HSPA6P17066 643 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 TATP17735 454 aaPredicted RBP9.47□□□□□ -0.89
PVT1-222ENST00000613916 ZNF827Q17R98 1081 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 TOM1L2Q6ZVM7 507 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 C8orf58Q8NAV2 365 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 SLC16A10Q8TF71 515 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 RAPGEF4Q8WZA2 1011 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 C5P01031 1676 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 UBR2Q8IWV8 1755 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 KDM6AO15550 1401 aaPredicted RBP9.47□□□□□ -0.89
PVT1-222ENST00000613916 MRC1P22897 1456 aa9.47□□□□□ -0.89
PVT1-222ENST00000613916 N4BP2Q86UW6 1770 aaPredicted RBP9.46□□□□□ -0.9
PVT1-222ENST00000613916 RNMTO43148 476 aaKnown RBP9.46□□□□□ -0.9
PVT1-222ENST00000613916 KRT24Q2M2I5 525 aa9.46□□□□□ -0.9
PVT1-222ENST00000613916 SSH1Q8WYL5 1049 aa9.46□□□□□ -0.9
PVT1-222ENST00000613916 MIS18AQ9NYP9 233 aa9.46□□□□□ -0.9
PVT1-222ENST00000613916 CYP27B1O15528 508 aa9.45□□□□□ -0.9
PVT1-222ENST00000613916 TAF7Q15545 349 aaPredicted RBP9.45□□□□□ -0.9
PVT1-222ENST00000613916 MPRIPQ6WCQ1 1025 aa9.45□□□□□ -0.9
PVT1-222ENST00000613916 EXOC6Q8TAG9 804 aa9.45□□□□□ -0.9
PVT1-222ENST00000613916 BCL2L13Q9BXK5 485 aa9.45□□□□□ -0.9
PVT1-222ENST00000613916 BABAM1Q9NWV8 329 aa9.45□□□□□ -0.9
PVT1-222ENST00000613916 SPG7Q9UQ90 795 aa9.45□□□□□ -0.9
PVT1-222ENST00000613916 GRIN3BO60391 1043 aa9.44□□□□□ -0.9
PVT1-222ENST00000613916 PHKG2P15735 406 aa9.44□□□□□ -0.9
PVT1-222ENST00000613916 YBX3P16989 372 aaKnown RBP eCLIP9.44□□□□□ -0.93e-7■□□□□ 10.3
PVT1-222ENST00000613916 BRPF1P55201 1214 aaPredicted RBP9.44□□□□□ -0.9
PVT1-222ENST00000613916 TWISTNBQ3B726 338 aaPredicted RBP9.44□□□□□ -0.9
PVT1-222ENST00000613916 ALDH1L2Q3SY69 923 aa9.44□□□□□ -0.9
PVT1-222ENST00000613916 C1orf141Q5JVX7 400 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms