RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 KCNQ4P56696 695 aa10.93□□□□□ -0.66
PSMB3-208ENST00000613870 CALD1Q05682 793 aaKnown RBP10.93□□□□□ -0.66
PSMB3-208ENST00000613870 ZNF827Q17R98 1081 aa10.93□□□□□ -0.66
PSMB3-208ENST00000613870 CCDC27Q2M243 656 aa10.93□□□□□ -0.66
PSMB3-208ENST00000613870 MTHFSDQ2M296 383 aaKnown RBP10.93□□□□□ -0.66
PSMB3-208ENST00000613870 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
PSMB3-208ENST00000613870 UTRNP46939 3433 aa10.93□□□□□ -0.66
PSMB3-208ENST00000613870 KDRP35968 1356 aa10.92□□□□□ -0.66
PSMB3-208ENST00000613870 E9PSI1 815 aa10.92□□□□□ -0.66
PSMB3-208ENST00000613870 ZBTB7AO95365 584 aa10.92□□□□□ -0.66
PSMB3-208ENST00000613870 AMOTQ4VCS5 1084 aa10.92□□□□□ -0.66
PSMB3-208ENST00000613870 C1orf141Q5JVX7 400 aa10.92□□□□□ -0.66
PSMB3-208ENST00000613870 SLC27A3Q5K4L6 730 aa10.92□□□□□ -0.66
PSMB3-208ENST00000613870 ZNF530Q6P9A1 599 aaPredicted RBP10.92□□□□□ -0.66
PSMB3-208ENST00000613870 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
PSMB3-208ENST00000613870 MYH16Q9H6N6 1097 aa10.92□□□□□ -0.66
PSMB3-208ENST00000613870 PTGER2P43116 358 aa10.91□□□□□ -0.66
PSMB3-208ENST00000613870 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
PSMB3-208ENST00000613870 POTEDQ86YR6 584 aa10.91□□□□□ -0.66
PSMB3-208ENST00000613870 THUMPD2Q9BTF0 503 aaKnown RBP10.91□□□□□ -0.66
PSMB3-208ENST00000613870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.66
PSMB3-208ENST00000613870 TRIM35Q9UPQ4 493 aa10.91□□□□□ -0.66
PSMB3-208ENST00000613870 SPG7Q9UQ90 795 aa10.91□□□□□ -0.66
PSMB3-208ENST00000613870 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
PSMB3-208ENST00000613870 TUBGCP6Q96RT7 1819 aa10.91□□□□□ -0.66
PSMB3-208ENST00000613870 GNAT3A8MTJ3 354 aa10.9□□□□□ -0.66
PSMB3-208ENST00000613870 SLFN5Q08AF3 891 aa10.9□□□□□ -0.66
PSMB3-208ENST00000613870 DCTN1Q14203 1278 aa10.9□□□□□ -0.66
PSMB3-208ENST00000613870 NCBP3Q53F19 620 aaKnown RBP10.9□□□□□ -0.66
PSMB3-208ENST00000613870 MPRIPQ6WCQ1 1025 aa10.9□□□□□ -0.66
PSMB3-208ENST00000613870 MCM10Q7L590 875 aa10.9□□□□□ -0.66
PSMB3-208ENST00000613870 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
PSMB3-208ENST00000613870 ZNF521Q96K83 1311 aa10.89□□□□□ -0.67
PSMB3-208ENST00000613870 PHKG2P15735 406 aa10.89□□□□□ -0.67
PSMB3-208ENST00000613870 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
PSMB3-208ENST00000613870 MTFR1LQ9H019 292 aa10.89□□□□□ -0.67
PSMB3-208ENST00000613870 PPP1R1BQ9UD71 204 aaPredicted RBP10.89□□□□□ -0.67
PSMB3-208ENST00000613870 CCNL1Q9UK58 526 aaPredicted RBP10.89□□□□□ -0.67
PSMB3-208ENST00000613870 MAP3K5Q99683 1374 aa10.89□□□□□ -0.67
PSMB3-208ENST00000613870 TAF1LQ8IZX4 1826 aa10.88□□□□□ -0.67
PSMB3-208ENST00000613870 PNPLA7Q6ZV29 1317 aa10.88□□□□□ -0.67
PSMB3-208ENST00000613870 NEFLP07196 543 aa10.88□□□□□ -0.67
PSMB3-208ENST00000613870 IFNL2Q8IZJ0 200 aa10.88□□□□□ -0.67
PSMB3-208ENST00000613870 PIGBQ92521 554 aa10.88□□□□□ -0.67
PSMB3-208ENST00000613870 IL16Q14005 1332 aa10.87□□□□□ -0.67
PSMB3-208ENST00000613870 HTATSF1O43719 755 aaKnown RBP10.87□□□□□ -0.67
PSMB3-208ENST00000613870 GNAI1P63096 354 aa10.87□□□□□ -0.67
PSMB3-208ENST00000613870 AKAP4Q5JQC9 854 aa10.87□□□□□ -0.67
PSMB3-208ENST00000613870 TSR2Q969E8 191 aaKnown RBP10.87□□□□□ -0.67
PSMB3-208ENST00000613870 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
PSMB3-208ENST00000613870 PALLDQ8WX93 1383 aa10.87□□□□□ -0.67
PSMB3-208ENST00000613870 PLEKHG2Q9H7P9 1386 aa10.87□□□□□ -0.67
PSMB3-208ENST00000613870 C5P01031 1676 aa10.86□□□□□ -0.67
PSMB3-208ENST00000613870 TEFQ10587 303 aa10.86□□□□□ -0.67
PSMB3-208ENST00000613870 DUSP27Q5VZP5 1158 aa10.86□□□□□ -0.67
PSMB3-208ENST00000613870 IFT57Q9NWB7 429 aa10.86□□□□□ -0.67
PSMB3-208ENST00000613870 TFCP2L1Q9NZI6 479 aa10.86□□□□□ -0.67
PSMB3-208ENST00000613870 RCAN3Q9UKA8 241 aa10.86□□□□□ -0.67
PSMB3-208ENST00000613870 SUPT16HQ9Y5B9 1047 aaKnown RBP10.86□□□□□ -0.67
PSMB3-208ENST00000613870 COL24A1Q17RW2 1714 aa10.85□□□□□ -0.67
PSMB3-208ENST00000613870 SLC16A10Q8TF71 515 aa10.85□□□□□ -0.67
PSMB3-208ENST00000613870 SMARCC1Q92922 1105 aaPredicted RBP10.85□□□□□ -0.67
PSMB3-208ENST00000613870 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
PSMB3-208ENST00000613870 TMOD3Q9NYL9 352 aa10.84□□□□□ -0.67
PSMB3-208ENST00000613870 TSPYL4Q9UJ04 414 aa10.84□□□□□ -0.67
PSMB3-208ENST00000613870 ASAP1Q9ULH1 1129 aa10.84□□□□□ -0.67
PSMB3-208ENST00000613870 GOLGB1Q14789 3259 aaKnown RBP10.84□□□□□ -0.67
PSMB3-208ENST00000613870 FANCIQ9NVI1 1328 aa10.84□□□□□ -0.67
PSMB3-208ENST00000613870 EXOSC9Q06265 439 aaKnown RBP10.83□□□□□ -0.68
PSMB3-208ENST00000613870 COL23A1Q86Y22 540 aaPredicted RBP10.83□□□□□ -0.68
PSMB3-208ENST00000613870 TRMT2AQ8IZ69 625 aaKnown RBP10.83□□□□□ -0.68
PSMB3-208ENST00000613870 IL17REQ8NFR9 667 aa10.83□□□□□ -0.68
PSMB3-208ENST00000613870 DCAF5Q96JK2 942 aa10.83□□□□□ -0.68
PSMB3-208ENST00000613870 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
PSMB3-208ENST00000613870 SYT17Q9BSW7 474 aa10.83□□□□□ -0.68
PSMB3-208ENST00000613870 LGR6Q9HBX8 967 aa10.83□□□□□ -0.68
PSMB3-208ENST00000613870 ATG3Q9NT62 314 aa10.83□□□□□ -0.68
PSMB3-208ENST00000613870 MIS18AQ9NYP9 233 aa10.83□□□□□ -0.68
PSMB3-208ENST00000613870 C4BP0C0L5 1744 aa10.82□□□□□ -0.68
PSMB3-208ENST00000613870 LOC102724428A0A0B4J2F2 783 aa10.82□□□□□ -0.68
PSMB3-208ENST00000613870 ERVV-2B6SEH9 535 aa10.82□□□□□ -0.68
PSMB3-208ENST00000613870 RNMTO43148 476 aaKnown RBP10.82□□□□□ -0.68
PSMB3-208ENST00000613870 CANXP27824 592 aaKnown RBP10.82□□□□□ -0.68
PSMB3-208ENST00000613870 SIK1P57059 783 aa10.82□□□□□ -0.68
PSMB3-208ENST00000613870 TAF7Q15545 349 aaPredicted RBP10.82□□□□□ -0.68
PSMB3-208ENST00000613870 ARXQ96QS3 562 aa10.82□□□□□ -0.68
PSMB3-208ENST00000613870 FHDC1Q9C0D6 1143 aaPredicted RBP10.82□□□□□ -0.68
PSMB3-208ENST00000613870 MBIPQ9NS73 344 aa10.82□□□□□ -0.68
PSMB3-208ENST00000613870 KDM6AO15550 1401 aaPredicted RBP10.82□□□□□ -0.68
PSMB3-208ENST00000613870 UBR3Q6ZT12 1888 aa10.81□□□□□ -0.68
PSMB3-208ENST00000613870 ELL2O00472 640 aaPredicted RBP10.81□□□□□ -0.68
PSMB3-208ENST00000613870 CABP4P57796 275 aa10.81□□□□□ -0.68
PSMB3-208ENST00000613870 ITPK1Q13572 414 aa10.81□□□□□ -0.68
PSMB3-208ENST00000613870 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
PSMB3-208ENST00000613870 DLG5Q8TDM6 1919 aa10.81□□□□□ -0.68
PSMB3-208ENST00000613870 SCN11AQ9UI33 1791 aa10.8□□□□□ -0.68
PSMB3-208ENST00000613870 VIRMAQ69YN4 1812 aaKnown RBP10.8□□□□□ -0.68
PSMB3-208ENST00000613870 BTBD11A6QL63 1104 aa10.8□□□□□ -0.68
PSMB3-208ENST00000613870 CHL1O00533 1208 aa10.8□□□□□ -0.68
PSMB3-208ENST00000613870 ATP6V1AP38606 617 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms