RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
COPS7B-223ENST00000611614 TEFQ10587 303 aa17.43■□□□□ 0.38
COPS7B-223ENST00000611614 SMC5Q8IY18 1101 aa17.43■□□□□ 0.38
COPS7B-223ENST00000611614 BABAM1Q9NWV8 329 aa17.43■□□□□ 0.38
COPS7B-223ENST00000611614 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.43■□□□□ 0.388e-10■■■□□ 14.8
COPS7B-223ENST00000611614 FAM208AQ9UK61 1670 aaKnown RBP17.43■□□□□ 0.38
COPS7B-223ENST00000611614 CAMTA1Q9Y6Y1 1673 aa17.43■□□□□ 0.38
COPS7B-223ENST00000611614 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
COPS7B-223ENST00000611614 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
COPS7B-223ENST00000611614 MIS18AQ9NYP9 233 aa17.42■□□□□ 0.38
COPS7B-223ENST00000611614 CHMP4BQ9H444 224 aaKnown RBP17.41■□□□□ 0.38
COPS7B-223ENST00000611614 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
COPS7B-223ENST00000611614 COL5A2P05997 1499 aaPredicted RBP17.41■□□□□ 0.38
COPS7B-223ENST00000611614 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
COPS7B-223ENST00000611614 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
COPS7B-223ENST00000611614 ABCA3Q99758 1704 aa17.4■□□□□ 0.38
COPS7B-223ENST00000611614 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
COPS7B-223ENST00000611614 BTG4Q9NY30 223 aa17.4■□□□□ 0.38
COPS7B-223ENST00000611614 LMO7Q8WWI1 1683 aa17.4■□□□□ 0.38
COPS7B-223ENST00000611614 PHLPP1O60346 1717 aa17.4■□□□□ 0.38
COPS7B-223ENST00000611614 CEMIPQ8WUJ3 1361 aa17.39■□□□□ 0.37
COPS7B-223ENST00000611614 LGR6Q9HBX8 967 aa17.39■□□□□ 0.37
COPS7B-223ENST00000611614 BECN1Q14457 450 aa17.39■□□□□ 0.37
COPS7B-223ENST00000611614 IFNL2Q8IZJ0 200 aa17.39■□□□□ 0.37
COPS7B-223ENST00000611614 RNMTO43148 476 aaKnown RBP17.38■□□□□ 0.37
COPS7B-223ENST00000611614 ZBTB7BO15156 539 aaPredicted RBP17.38■□□□□ 0.37
COPS7B-223ENST00000611614 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
COPS7B-223ENST00000611614 CERKQ8TCT0 537 aa17.38■□□□□ 0.37
COPS7B-223ENST00000611614 HSP90AB1P08238 724 aaKnown RBP17.37■□□□□ 0.37
COPS7B-223ENST00000611614 TBC1D32Q96NH3 1257 aa17.37■□□□□ 0.37
COPS7B-223ENST00000611614 MEGF6O75095 1541 aa17.37■□□□□ 0.37
COPS7B-223ENST00000611614 IL2RBP14784 551 aa17.37■□□□□ 0.37
COPS7B-223ENST00000611614 ABCC4O15439 1325 aa17.36■□□□□ 0.37
COPS7B-223ENST00000611614 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
COPS7B-223ENST00000611614 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
COPS7B-223ENST00000611614 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
COPS7B-223ENST00000611614 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
COPS7B-223ENST00000611614 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
COPS7B-223ENST00000611614 PHKG2P15735 406 aa17.36■□□□□ 0.37
COPS7B-223ENST00000611614 NUCB1Q02818 461 aa17.36■□□□□ 0.37
COPS7B-223ENST00000611614 KRT24Q2M2I5 525 aa17.36■□□□□ 0.37
COPS7B-223ENST00000611614 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
COPS7B-223ENST00000611614 COL16A1Q07092 1604 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-223ENST00000611614 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-223ENST00000611614 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
COPS7B-223ENST00000611614 RTN4Q9NQC3 1192 aaKnown RBP17.35■□□□□ 0.37
COPS7B-223ENST00000611614 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
COPS7B-223ENST00000611614 OVOS2A0A0G2JMS6 1433 aa17.35■□□□□ 0.37
COPS7B-223ENST00000611614 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
COPS7B-223ENST00000611614 CHMP4AQ9BY43 222 aa17.35■□□□□ 0.37
COPS7B-223ENST00000611614 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-223ENST00000611614 LRRC37A3O60309 1634 aa17.34■□□□□ 0.37
COPS7B-223ENST00000611614 ANO8Q9HCE9 1232 aaPredicted RBP17.33■□□□□ 0.37
COPS7B-223ENST00000611614 PCDH11XQ9BZA7 1347 aa17.33■□□□□ 0.36
COPS7B-223ENST00000611614 PCDH11YQ9BZA8 1340 aa17.33■□□□□ 0.36
COPS7B-223ENST00000611614 DCAF5Q96JK2 942 aa17.33■□□□□ 0.36
COPS7B-223ENST00000611614 STK31Q9BXU1 1019 aa17.33■□□□□ 0.36
COPS7B-223ENST00000611614 COL14A1Q05707 1796 aaKnown RBP17.33■□□□□ 0.36
COPS7B-223ENST00000611614 CHD1LQ86WJ1 897 aa17.32■□□□□ 0.36
COPS7B-223ENST00000611614 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
COPS7B-223ENST00000611614 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
COPS7B-223ENST00000611614 CYP27B1O15528 508 aa17.3■□□□□ 0.36
COPS7B-223ENST00000611614 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
COPS7B-223ENST00000611614 LNPKQ9C0E8 428 aa17.29■□□□□ 0.36
COPS7B-223ENST00000611614 SLC52A2Q9HAB3 445 aa17.29■□□□□ 0.36
COPS7B-223ENST00000611614 JCADQ9P266 1359 aa17.29■□□□□ 0.36
COPS7B-223ENST00000611614 C1orf115Q9H7X2 142 aa17.29■□□□□ 0.36
COPS7B-223ENST00000611614 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
COPS7B-223ENST00000611614 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
COPS7B-223ENST00000611614 PARP4Q9UKK3 1724 aaKnown RBP17.28■□□□□ 0.36
COPS7B-223ENST00000611614 HOXB7P09629 217 aa17.28■□□□□ 0.36
COPS7B-223ENST00000611614 CABP4P57796 275 aa17.27■□□□□ 0.36
COPS7B-223ENST00000611614 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
COPS7B-223ENST00000611614 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.36
COPS7B-223ENST00000611614 PTPRCP08575 1304 aa17.27■□□□□ 0.36
COPS7B-223ENST00000611614 MFAP1P55081 439 aaKnown RBP17.27■□□□□ 0.35
COPS7B-223ENST00000611614 HDGFL1Q5TGJ6 251 aa17.27■□□□□ 0.35
COPS7B-223ENST00000611614 FAM43AQ8N2R8 423 aa17.27■□□□□ 0.35
COPS7B-223ENST00000611614 ANKRD45Q5TZF3 282 aa17.26■□□□□ 0.35
COPS7B-223ENST00000611614 SIRT2Q8IXJ6 389 aa17.26■□□□□ 0.35
COPS7B-223ENST00000611614 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
COPS7B-223ENST00000611614 KDM6AO15550 1401 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-223ENST00000611614 PKD1L3Q7Z443 1732 aa17.26■□□□□ 0.35
COPS7B-223ENST00000611614 TTC5Q8N0Z6 440 aa17.25■□□□□ 0.35
COPS7B-223ENST00000611614 NECTIN2Q92692 538 aa17.25■□□□□ 0.35
COPS7B-223ENST00000611614 TBC1D2Q9BYX2 928 aa17.25■□□□□ 0.35
COPS7B-223ENST00000611614 EIF2S2P20042 333 aaKnown RBP17.25■□□□□ 0.35
COPS7B-223ENST00000611614 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
COPS7B-223ENST00000611614 KCNQ3O43525 872 aa17.24■□□□□ 0.35
COPS7B-223ENST00000611614 BMP2KLQ5H9B9 411 aa17.24■□□□□ 0.35
COPS7B-223ENST00000611614 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
COPS7B-223ENST00000611614 ZNF790Q6PG37 636 aa17.24■□□□□ 0.35
COPS7B-223ENST00000611614 CDCA7Q9BWT1 371 aaPredicted RBP17.24■□□□□ 0.35
COPS7B-223ENST00000611614 NGLY1Q96IV0 654 aa17.24■□□□□ 0.35
COPS7B-223ENST00000611614 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
COPS7B-223ENST00000611614 EXOC5O00471 708 aa17.23■□□□□ 0.35
COPS7B-223ENST00000611614 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
COPS7B-223ENST00000611614 RGS12O14924 1447 aa17.23■□□□□ 0.35
COPS7B-223ENST00000611614 SPATA31A6Q5VVP1 1343 aa17.23■□□□□ 0.35
COPS7B-223ENST00000611614 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms